Mercurial > repos > galaxyp > maxquant

comparison macros.xml @ 1:8bac3cc5c5de draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit ab4e4f1817080cbe8a031a82cb180610ff140847
author galaxyp
date Sat, 20 Jul 2019 05:01:05 -0400
parents
children dcd39bcc7481
comparison
equal deleted inserted replaced
0:d4b6c9eae635 1:8bac3cc5c5de
1 <?xml version="1.0" ?>
2 <macros>
3 <token name="@VERSION@">1.6.3.4</token>
4 <token name="@SUBSTITUTION_RX@">[^\w\-\s\.]</token>
5 <xml name="output" token_format="tabular" token_label="default description" token_name="default">
6 <data format="@FORMAT@" label="@LABEL@ for ${on_string}" name="@NAME@">
7 <filter>'@NAME@' in output_opts['output']</filter>
8 </data>
9 </xml>
10 <xml name="output_option" token_label="default label" token_name="default">
11 <option value="@NAME@">@LABEL@</option>
12 </xml>
13 <xml name="mod_option" token_value="default">
14 <option value="@VALUE@">@VALUE@</option>
15 </xml>
16 <xml name="modification">
17 <expand macro="mod_option" value="Acetyl (K)"/>
18 <expand macro="mod_option" value="Acetyl (Protein N-term)"/>
19 <expand macro="mod_option" value="Carbamidomethyl (C)"/>
20 <expand macro="mod_option" value="Oxidation (M)"/>
21 <expand macro="mod_option" value="Phospho (STY)"/>
22 <expand macro="mod_option" value="GlyGly (K)"/>
23 <expand macro="mod_option" value="Methyl (KR)"/>
24 <expand macro="mod_option" value="Dimethyl (KR)"/>
25 <expand macro="mod_option" value="Trimethyl (K)"/>
26 <expand macro="mod_option" value="Pro5"/>
27 <expand macro="mod_option" value="Pro6"/>
28 <expand macro="mod_option" value="Glu-&gt;pyro-Glu"/>
29 <expand macro="mod_option" value="Gln-&gt;pyro-Glu"/>
30 <expand macro="mod_option" value="QQTGG (K)"/>
31 <expand macro="mod_option" value="Deamidation (N)"/>
32 <expand macro="mod_option" value="Deamidation 18O (N)"/>
33 <expand macro="mod_option" value="Deamidation (NQ)"/>
34 <expand macro="mod_option" value="Hydroxyproline"/>
35 <expand macro="mod_option" value="Carbamyl (N-term)"/>
36 <expand macro="mod_option" value="Delta:H(2)C(2) (N-term)"/>
37 <expand macro="mod_option" value="Dioxidation (MW)"/>
38 <expand macro="mod_option" value="Trioxidation (C)"/>
39 <expand macro="mod_option" value="Dethiomethyl (M)"/>
40 <expand macro="mod_option" value="Cation:Na (DE)"/>
41 <expand macro="mod_option" value="Methyl (E)"/>
42 <expand macro="mod_option" value="Dehydrated (ST)"/>
43 <expand macro="mod_option" value="Oxidation (P)"/>
44 <expand macro="mod_option" value="Dimethyl (K)"/>
45 <expand macro="mod_option" value="Amidated (Protein C-term)"/>
46 <expand macro="mod_option" value="Sulfo (STY)"/>
47 <expand macro="mod_option" value="Acetyl (N-term)"/>
48 <expand macro="mod_option" value="Amidated (C-term)"/>
49 <expand macro="mod_option" value="Sulfation (Y)"/>
50 <expand macro="mod_option" value="Phospho (ST)"/>
51 <expand macro="mod_option" value="Cys-Cys"/>
52 <expand macro="mod_option" value="Ala-&gt;Arg"/>
53 <expand macro="mod_option" value="Ala-&gt;Asn"/>
54 <expand macro="mod_option" value="Ala-&gt;Asp"/>
55 <expand macro="mod_option" value="Ala-&gt;Cys"/>
56 <expand macro="mod_option" value="Ala-&gt;Gln"/>
57 <expand macro="mod_option" value="Ala-&gt;Glu"/>
58 <expand macro="mod_option" value="Ala-&gt;Gly"/>
59 <expand macro="mod_option" value="Ala-&gt;His"/>
60 <expand macro="mod_option" value="Ala-&gt;Xle"/>
61 <expand macro="mod_option" value="Ala-&gt;Lys"/>
62 <expand macro="mod_option" value="Ala-&gt;Met"/>
63 <expand macro="mod_option" value="Ala-&gt;Phe"/>
64 <expand macro="mod_option" value="Ala-&gt;Pro"/>
65 <expand macro="mod_option" value="Ala-&gt;Ser"/>
66 <expand macro="mod_option" value="Ala-&gt;Thr"/>
67 <expand macro="mod_option" value="Ala-&gt;Trp"/>
68 <expand macro="mod_option" value="Ala-&gt;Tyr"/>
69 <expand macro="mod_option" value="Ala-&gt;Val"/>
70 <expand macro="mod_option" value="Arg-&gt;Ala"/>
71 <expand macro="mod_option" value="Arg-&gt;Asn"/>
72 <expand macro="mod_option" value="Arg-&gt;Asp"/>
73 <expand macro="mod_option" value="Arg-&gt;Cys"/>
74 <expand macro="mod_option" value="Arg-&gt;Gln"/>
75 <expand macro="mod_option" value="Arg-&gt;Glu"/>
76 <expand macro="mod_option" value="Arg-&gt;Gly"/>
77 <expand macro="mod_option" value="Arg-&gt;His"/>
78 <expand macro="mod_option" value="Arg-&gt;Lys"/>
79 <expand macro="mod_option" value="Arg-&gt;Met"/>
80 <expand macro="mod_option" value="Arg-&gt;Phe"/>
81 <expand macro="mod_option" value="Arg-&gt;Pro"/>
82 <expand macro="mod_option" value="Arg-&gt;Ser"/>
83 <expand macro="mod_option" value="Arg-&gt;Thr"/>
84 <expand macro="mod_option" value="Arg-&gt;Trp"/>
85 <expand macro="mod_option" value="Arg-&gt;Tyr"/>
86 <expand macro="mod_option" value="Arg-&gt;Val"/>
87 <expand macro="mod_option" value="Arg-&gt;Xle"/>
88 <expand macro="mod_option" value="Asn-&gt;Ala"/>
89 <expand macro="mod_option" value="Asn-&gt;Arg"/>
90 <expand macro="mod_option" value="Asn-&gt;Asp"/>
91 <expand macro="mod_option" value="Asn-&gt;Cys"/>
92 <expand macro="mod_option" value="Asn-&gt;Gln"/>
93 <expand macro="mod_option" value="Asn-&gt;Glu"/>
94 <expand macro="mod_option" value="Asn-&gt;Gly"/>
95 <expand macro="mod_option" value="Asn-&gt;His"/>
96 <expand macro="mod_option" value="Asn-&gt;Lys"/>
97 <expand macro="mod_option" value="Asn-&gt;Met"/>
98 <expand macro="mod_option" value="Asn-&gt;Phe"/>
99 <expand macro="mod_option" value="Asn-&gt;Pro"/>
100 <expand macro="mod_option" value="Asn-&gt;Ser"/>
101 <expand macro="mod_option" value="Asn-&gt;Thr"/>
102 <expand macro="mod_option" value="Asn-&gt;Trp"/>
103 <expand macro="mod_option" value="Asn-&gt;Tyr"/>
104 <expand macro="mod_option" value="Asn-&gt;Val"/>
105 <expand macro="mod_option" value="Asn-&gt;Xle"/>
106 <expand macro="mod_option" value="Asp-&gt;Ala"/>
107 <expand macro="mod_option" value="Asp-&gt;Arg"/>
108 <expand macro="mod_option" value="Asp-&gt;Asn"/>
109 <expand macro="mod_option" value="Asp-&gt;Cys"/>
110 <expand macro="mod_option" value="Asp-&gt;Gln"/>
111 <expand macro="mod_option" value="Asp-&gt;Glu"/>
112 <expand macro="mod_option" value="Asp-&gt;Gly"/>
113 <expand macro="mod_option" value="Asp-&gt;His"/>
114 <expand macro="mod_option" value="Asp-&gt;Lys"/>
115 <expand macro="mod_option" value="Asp-&gt;Met"/>
116 <expand macro="mod_option" value="Asp-&gt;Phe"/>
117 <expand macro="mod_option" value="Asp-&gt;Pro"/>
118 <expand macro="mod_option" value="Asp-&gt;Ser"/>
119 <expand macro="mod_option" value="Asp-&gt;Thr"/>
120 <expand macro="mod_option" value="Asp-&gt;Trp"/>
121 <expand macro="mod_option" value="Asp-&gt;Tyr"/>
122 <expand macro="mod_option" value="Asp-&gt;Val"/>
123 <expand macro="mod_option" value="Asp-&gt;Xle"/>
124 <expand macro="mod_option" value="Cys-&gt;Ala"/>
125 <expand macro="mod_option" value="Cys-&gt;Arg"/>
126 <expand macro="mod_option" value="Cys-&gt;Asn"/>
127 <expand macro="mod_option" value="Cys-&gt;Asp"/>
128 <expand macro="mod_option" value="Cys-&gt;Gln"/>
129 <expand macro="mod_option" value="Cys-&gt;Glu"/>
130 <expand macro="mod_option" value="Cys-&gt;Gly"/>
131 <expand macro="mod_option" value="Cys-&gt;His"/>
132 <expand macro="mod_option" value="Cys-&gt;Lys"/>
133 <expand macro="mod_option" value="Cys-&gt;Met"/>
134 <expand macro="mod_option" value="Cys-&gt;Phe"/>
135 <expand macro="mod_option" value="Cys-&gt;Pro"/>
136 <expand macro="mod_option" value="Cys-&gt;Ser"/>
137 <expand macro="mod_option" value="Cys-&gt;Thr"/>
138 <expand macro="mod_option" value="Cys-&gt;Trp"/>
139 <expand macro="mod_option" value="Cys-&gt;Tyr"/>
140 <expand macro="mod_option" value="Cys-&gt;Val"/>
141 <expand macro="mod_option" value="Cys-&gt;Xle"/>
142 <expand macro="mod_option" value="Gln-&gt;Ala"/>
143 <expand macro="mod_option" value="Gln-&gt;Arg"/>
144 <expand macro="mod_option" value="Gln-&gt;Asn"/>
145 <expand macro="mod_option" value="Gln-&gt;Asp"/>
146 <expand macro="mod_option" value="Gln-&gt;Cys"/>
147 <expand macro="mod_option" value="Gln-&gt;Glu"/>
148 <expand macro="mod_option" value="Gln-&gt;Gly"/>
149 <expand macro="mod_option" value="Gln-&gt;His"/>
150 <expand macro="mod_option" value="Gln-&gt;Lys"/>
151 <expand macro="mod_option" value="Gln-&gt;Met"/>
152 <expand macro="mod_option" value="Gln-&gt;Phe"/>
153 <expand macro="mod_option" value="Gln-&gt;Pro"/>
154 <expand macro="mod_option" value="Gln-&gt;Ser"/>
155 <expand macro="mod_option" value="Gln-&gt;Thr"/>
156 <expand macro="mod_option" value="Gln-&gt;Trp"/>
157 <expand macro="mod_option" value="Gln-&gt;Tyr"/>
158 <expand macro="mod_option" value="Gln-&gt;Val"/>
159 <expand macro="mod_option" value="Gln-&gt;Xle"/>
160 <expand macro="mod_option" value="Glu-&gt;Ala"/>
161 <expand macro="mod_option" value="Glu-&gt;Arg"/>
162 <expand macro="mod_option" value="Glu-&gt;Asn"/>
163 <expand macro="mod_option" value="Glu-&gt;Asp"/>
164 <expand macro="mod_option" value="Glu-&gt;Cys"/>
165 <expand macro="mod_option" value="Glu-&gt;Gln"/>
166 <expand macro="mod_option" value="Glu-&gt;Gly"/>
167 <expand macro="mod_option" value="Glu-&gt;His"/>
168 <expand macro="mod_option" value="Glu-&gt;Lys"/>
169 <expand macro="mod_option" value="Glu-&gt;Met"/>
170 <expand macro="mod_option" value="Glu-&gt;Phe"/>
171 <expand macro="mod_option" value="Glu-&gt;Pro"/>
172 <expand macro="mod_option" value="Glu-&gt;Ser"/>
173 <expand macro="mod_option" value="Glu-&gt;Thr"/>
174 <expand macro="mod_option" value="Glu-&gt;Trp"/>
175 <expand macro="mod_option" value="Glu-&gt;Tyr"/>
176 <expand macro="mod_option" value="Glu-&gt;Val"/>
177 <expand macro="mod_option" value="Glu-&gt;Xle"/>
178 <expand macro="mod_option" value="Gly-&gt;Ala"/>
179 <expand macro="mod_option" value="Gly-&gt;Arg"/>
180 <expand macro="mod_option" value="Gly-&gt;Asn"/>
181 <expand macro="mod_option" value="Gly-&gt;Asp"/>
182 <expand macro="mod_option" value="Gly-&gt;Cys"/>
183 <expand macro="mod_option" value="Gly-&gt;Gln"/>
184 <expand macro="mod_option" value="Gly-&gt;Glu"/>
185 <expand macro="mod_option" value="Gly-&gt;His"/>
186 <expand macro="mod_option" value="Gly-&gt;Lys"/>
187 <expand macro="mod_option" value="Gly-&gt;Met"/>
188 <expand macro="mod_option" value="Gly-&gt;Phe"/>
189 <expand macro="mod_option" value="Gly-&gt;Pro"/>
190 <expand macro="mod_option" value="Gly-&gt;Ser"/>
191 <expand macro="mod_option" value="Gly-&gt;Thr"/>
192 <expand macro="mod_option" value="Gly-&gt;Trp"/>
193 <expand macro="mod_option" value="Gly-&gt;Tyr"/>
194 <expand macro="mod_option" value="Gly-&gt;Val"/>
195 <expand macro="mod_option" value="Gly-&gt;Xle"/>
196 <expand macro="mod_option" value="His-&gt;Ala"/>
197 <expand macro="mod_option" value="His-&gt;Arg"/>
198 <expand macro="mod_option" value="His-&gt;Asn"/>
199 <expand macro="mod_option" value="His-&gt;Asp"/>
200 <expand macro="mod_option" value="His-&gt;Cys"/>
201 <expand macro="mod_option" value="His-&gt;Gln"/>
202 <expand macro="mod_option" value="His-&gt;Glu"/>
203 <expand macro="mod_option" value="His-&gt;Gly"/>
204 <expand macro="mod_option" value="His-&gt;Lys"/>
205 <expand macro="mod_option" value="His-&gt;Met"/>
206 <expand macro="mod_option" value="His-&gt;Phe"/>
207 <expand macro="mod_option" value="His-&gt;Pro"/>
208 <expand macro="mod_option" value="His-&gt;Ser"/>
209 <expand macro="mod_option" value="His-&gt;Thr"/>
210 <expand macro="mod_option" value="His-&gt;Trp"/>
211 <expand macro="mod_option" value="His-&gt;Tyr"/>
212 <expand macro="mod_option" value="His-&gt;Val"/>
213 <expand macro="mod_option" value="His-&gt;Xle"/>
214 <expand macro="mod_option" value="Lys-&gt;Ala"/>
215 <expand macro="mod_option" value="Lys-&gt;Arg"/>
216 <expand macro="mod_option" value="Lys-&gt;Asn"/>
217 <expand macro="mod_option" value="Lys-&gt;Asp"/>
218 <expand macro="mod_option" value="Lys-&gt;Cys"/>
219 <expand macro="mod_option" value="Lys-&gt;Gln"/>
220 <expand macro="mod_option" value="Lys-&gt;Glu"/>
221 <expand macro="mod_option" value="Lys-&gt;Gly"/>
222 <expand macro="mod_option" value="Lys-&gt;His"/>
223 <expand macro="mod_option" value="Lys-&gt;Met"/>
224 <expand macro="mod_option" value="Lys-&gt;Phe"/>
225 <expand macro="mod_option" value="Lys-&gt;Pro"/>
226 <expand macro="mod_option" value="Lys-&gt;Ser"/>
227 <expand macro="mod_option" value="Lys-&gt;Thr"/>
228 <expand macro="mod_option" value="Lys-&gt;Trp"/>
229 <expand macro="mod_option" value="Lys-&gt;Tyr"/>
230 <expand macro="mod_option" value="Lys-&gt;Val"/>
231 <expand macro="mod_option" value="Lys-&gt;Xle"/>
232 <expand macro="mod_option" value="Met-&gt;Ala"/>
233 <expand macro="mod_option" value="Met-&gt;Arg"/>
234 <expand macro="mod_option" value="Met-&gt;Asn"/>
235 <expand macro="mod_option" value="Met-&gt;Asp"/>
236 <expand macro="mod_option" value="Met-&gt;Cys"/>
237 <expand macro="mod_option" value="Met-&gt;Gln"/>
238 <expand macro="mod_option" value="Met-&gt;Glu"/>
239 <expand macro="mod_option" value="Met-&gt;Gly"/>
240 <expand macro="mod_option" value="Met-&gt;His"/>
241 <expand macro="mod_option" value="Met-&gt;Lys"/>
242 <expand macro="mod_option" value="Met-&gt;Phe"/>
243 <expand macro="mod_option" value="Met-&gt;Pro"/>
244 <expand macro="mod_option" value="Met-&gt;Ser"/>
245 <expand macro="mod_option" value="Met-&gt;Thr"/>
246 <expand macro="mod_option" value="Met-&gt;Trp"/>
247 <expand macro="mod_option" value="Met-&gt;Tyr"/>
248 <expand macro="mod_option" value="Met-&gt;Val"/>
249 <expand macro="mod_option" value="Met-&gt;Xle"/>
250 <expand macro="mod_option" value="Phe-&gt;Ala"/>
251 <expand macro="mod_option" value="Phe-&gt;Arg"/>
252 <expand macro="mod_option" value="Phe-&gt;Asn"/>
253 <expand macro="mod_option" value="Phe-&gt;Asp"/>
254 <expand macro="mod_option" value="Phe-&gt;Cys"/>
255 <expand macro="mod_option" value="Phe-&gt;Gln"/>
256 <expand macro="mod_option" value="Phe-&gt;Glu"/>
257 <expand macro="mod_option" value="Phe-&gt;Gly"/>
258 <expand macro="mod_option" value="Phe-&gt;His"/>
259 <expand macro="mod_option" value="Phe-&gt;Lys"/>
260 <expand macro="mod_option" value="Phe-&gt;Met"/>
261 <expand macro="mod_option" value="Phe-&gt;Pro"/>
262 <expand macro="mod_option" value="Phe-&gt;Ser"/>
263 <expand macro="mod_option" value="Phe-&gt;Thr"/>
264 <expand macro="mod_option" value="Phe-&gt;Trp"/>
265 <expand macro="mod_option" value="Phe-&gt;Tyr"/>
266 <expand macro="mod_option" value="Phe-&gt;Val"/>
267 <expand macro="mod_option" value="Phe-&gt;Xle"/>
268 <expand macro="mod_option" value="Pro-&gt;Ala"/>
269 <expand macro="mod_option" value="Pro-&gt;Arg"/>
270 <expand macro="mod_option" value="Pro-&gt;Asn"/>
271 <expand macro="mod_option" value="Pro-&gt;Asp"/>
272 <expand macro="mod_option" value="Pro-&gt;Cys"/>
273 <expand macro="mod_option" value="Pro-&gt;Gln"/>
274 <expand macro="mod_option" value="Pro-&gt;Glu"/>
275 <expand macro="mod_option" value="Pro-&gt;Gly"/>
276 <expand macro="mod_option" value="Pro-&gt;His"/>
277 <expand macro="mod_option" value="Pro-&gt;Lys"/>
278 <expand macro="mod_option" value="Pro-&gt;Met"/>
279 <expand macro="mod_option" value="Pro-&gt;Phe"/>
280 <expand macro="mod_option" value="Pro-&gt;Ser"/>
281 <expand macro="mod_option" value="Pro-&gt;Thr"/>
282 <expand macro="mod_option" value="Pro-&gt;Trp"/>
283 <expand macro="mod_option" value="Pro-&gt;Tyr"/>
284 <expand macro="mod_option" value="Pro-&gt;Val"/>
285 <expand macro="mod_option" value="Pro-&gt;Xle"/>
286 <expand macro="mod_option" value="Ser-&gt;Ala"/>
287 <expand macro="mod_option" value="Ser-&gt;Arg"/>
288 <expand macro="mod_option" value="Ser-&gt;Asn"/>
289 <expand macro="mod_option" value="Ser-&gt;Asp"/>
290 <expand macro="mod_option" value="Ser-&gt;Cys"/>
291 <expand macro="mod_option" value="Ser-&gt;Gln"/>
292 <expand macro="mod_option" value="Ser-&gt;Glu"/>
293 <expand macro="mod_option" value="Ser-&gt;Gly"/>
294 <expand macro="mod_option" value="Ser-&gt;His"/>
295 <expand macro="mod_option" value="Ser-&gt;Lys"/>
296 <expand macro="mod_option" value="Ser-&gt;Met"/>
297 <expand macro="mod_option" value="Ser-&gt;Phe"/>
298 <expand macro="mod_option" value="Ser-&gt;Pro"/>
299 <expand macro="mod_option" value="Ser-&gt;Thr"/>
300 <expand macro="mod_option" value="Ser-&gt;Trp"/>
301 <expand macro="mod_option" value="Ser-&gt;Tyr"/>
302 <expand macro="mod_option" value="Ser-&gt;Val"/>
303 <expand macro="mod_option" value="Ser-&gt;Xle"/>
304 <expand macro="mod_option" value="Thr-&gt;Ala"/>
305 <expand macro="mod_option" value="Thr-&gt;Arg"/>
306 <expand macro="mod_option" value="Thr-&gt;Asn"/>
307 <expand macro="mod_option" value="Thr-&gt;Asp"/>
308 <expand macro="mod_option" value="Thr-&gt;Cys"/>
309 <expand macro="mod_option" value="Thr-&gt;Gln"/>
310 <expand macro="mod_option" value="Thr-&gt;Glu"/>
311 <expand macro="mod_option" value="Thr-&gt;Gly"/>
312 <expand macro="mod_option" value="Thr-&gt;His"/>
313 <expand macro="mod_option" value="Thr-&gt;Lys"/>
314 <expand macro="mod_option" value="Thr-&gt;Met"/>
315 <expand macro="mod_option" value="Thr-&gt;Phe"/>
316 <expand macro="mod_option" value="Thr-&gt;Pro"/>
317 <expand macro="mod_option" value="Thr-&gt;Ser"/>
318 <expand macro="mod_option" value="Thr-&gt;Trp"/>
319 <expand macro="mod_option" value="Thr-&gt;Tyr"/>
320 <expand macro="mod_option" value="Thr-&gt;Val"/>
321 <expand macro="mod_option" value="Thr-&gt;Xle"/>
322 <expand macro="mod_option" value="Trp-&gt;Ala"/>
323 <expand macro="mod_option" value="Trp-&gt;Arg"/>
324 <expand macro="mod_option" value="Trp-&gt;Asn"/>
325 <expand macro="mod_option" value="Trp-&gt;Asp"/>
326 <expand macro="mod_option" value="Trp-&gt;Cys"/>
327 <expand macro="mod_option" value="Trp-&gt;Gln"/>
328 <expand macro="mod_option" value="Trp-&gt;Glu"/>
329 <expand macro="mod_option" value="Trp-&gt;Gly"/>
330 <expand macro="mod_option" value="Trp-&gt;His"/>
331 <expand macro="mod_option" value="Trp-&gt;Lys"/>
332 <expand macro="mod_option" value="Trp-&gt;Met"/>
333 <expand macro="mod_option" value="Trp-&gt;Phe"/>
334 <expand macro="mod_option" value="Trp-&gt;Pro"/>
335 <expand macro="mod_option" value="Trp-&gt;Ser"/>
336 <expand macro="mod_option" value="Trp-&gt;Thr"/>
337 <expand macro="mod_option" value="Trp-&gt;Tyr"/>
338 <expand macro="mod_option" value="Trp-&gt;Val"/>
339 <expand macro="mod_option" value="Trp-&gt;Xle"/>
340 <expand macro="mod_option" value="Tyr-&gt;Ala"/>
341 <expand macro="mod_option" value="Tyr-&gt;Arg"/>
342 <expand macro="mod_option" value="Tyr-&gt;Asn"/>
343 <expand macro="mod_option" value="Tyr-&gt;Asp"/>
344 <expand macro="mod_option" value="Tyr-&gt;Cys"/>
345 <expand macro="mod_option" value="Tyr-&gt;Gln"/>
346 <expand macro="mod_option" value="Tyr-&gt;Glu"/>
347 <expand macro="mod_option" value="Tyr-&gt;Gly"/>
348 <expand macro="mod_option" value="Tyr-&gt;His"/>
349 <expand macro="mod_option" value="Tyr-&gt;Lys"/>
350 <expand macro="mod_option" value="Tyr-&gt;Met"/>
351 <expand macro="mod_option" value="Tyr-&gt;Phe"/>
352 <expand macro="mod_option" value="Tyr-&gt;Pro"/>
353 <expand macro="mod_option" value="Tyr-&gt;Ser"/>
354 <expand macro="mod_option" value="Tyr-&gt;Thr"/>
355 <expand macro="mod_option" value="Tyr-&gt;Trp"/>
356 <expand macro="mod_option" value="Tyr-&gt;Val"/>
357 <expand macro="mod_option" value="Tyr-&gt;Xle"/>
358 <expand macro="mod_option" value="Val-&gt;Ala"/>
359 <expand macro="mod_option" value="Val-&gt;Arg"/>
360 <expand macro="mod_option" value="Val-&gt;Asn"/>
361 <expand macro="mod_option" value="Val-&gt;Asp"/>
362 <expand macro="mod_option" value="Val-&gt;Cys"/>
363 <expand macro="mod_option" value="Val-&gt;Gln"/>
364 <expand macro="mod_option" value="Val-&gt;Glu"/>
365 <expand macro="mod_option" value="Val-&gt;Gly"/>
366 <expand macro="mod_option" value="Val-&gt;His"/>
367 <expand macro="mod_option" value="Val-&gt;Lys"/>
368 <expand macro="mod_option" value="Val-&gt;Met"/>
369 <expand macro="mod_option" value="Val-&gt;Phe"/>
370 <expand macro="mod_option" value="Val-&gt;Pro"/>
371 <expand macro="mod_option" value="Val-&gt;Ser"/>
372 <expand macro="mod_option" value="Val-&gt;Thr"/>
373 <expand macro="mod_option" value="Val-&gt;Trp"/>
374 <expand macro="mod_option" value="Val-&gt;Tyr"/>
375 <expand macro="mod_option" value="Val-&gt;Xle"/>
376 <expand macro="mod_option" value="Xle-&gt;Ala"/>
377 <expand macro="mod_option" value="Xle-&gt;Arg"/>
378 <expand macro="mod_option" value="Xle-&gt;Asn"/>
379 <expand macro="mod_option" value="Xle-&gt;Asp"/>
380 <expand macro="mod_option" value="Xle-&gt;Cys"/>
381 <expand macro="mod_option" value="Xle-&gt;Gln"/>
382 <expand macro="mod_option" value="Xle-&gt;Glu"/>
383 <expand macro="mod_option" value="Xle-&gt;Gly"/>
384 <expand macro="mod_option" value="Xle-&gt;His"/>
385 <expand macro="mod_option" value="Xle-&gt;Lys"/>
386 <expand macro="mod_option" value="Xle-&gt;Met"/>
387 <expand macro="mod_option" value="Xle-&gt;Phe"/>
388 <expand macro="mod_option" value="Xle-&gt;Pro"/>
389 <expand macro="mod_option" value="Xle-&gt;Ser"/>
390 <expand macro="mod_option" value="Xle-&gt;Thr"/>
391 <expand macro="mod_option" value="Xle-&gt;Trp"/>
392 <expand macro="mod_option" value="Xle-&gt;Tyr"/>
393 <expand macro="mod_option" value="Xle-&gt;Val"/>
394 <expand macro="mod_option" value="CamCys-&gt;Ala"/>
395 <expand macro="mod_option" value="CamCys-&gt;Arg"/>
396 <expand macro="mod_option" value="CamCys-&gt;Asn"/>
397 <expand macro="mod_option" value="CamCys-&gt;Asp"/>
398 <expand macro="mod_option" value="CamCys-&gt;Gln"/>
399 <expand macro="mod_option" value="CamCys-&gt;Glu"/>
400 <expand macro="mod_option" value="CamCys-&gt;Gly"/>
401 <expand macro="mod_option" value="CamCys-&gt;His"/>
402 <expand macro="mod_option" value="CamCys-&gt;Lys"/>
403 <expand macro="mod_option" value="CamCys-&gt;Met"/>
404 <expand macro="mod_option" value="CamCys-&gt;Phe"/>
405 <expand macro="mod_option" value="CamCys-&gt;Pro"/>
406 <expand macro="mod_option" value="CamCys-&gt;Ser"/>
407 <expand macro="mod_option" value="CamCys-&gt;Thr"/>
408 <expand macro="mod_option" value="CamCys-&gt;Trp"/>
409 <expand macro="mod_option" value="CamCys-&gt;Tyr"/>
410 <expand macro="mod_option" value="CamCys-&gt;Val"/>
411 <expand macro="mod_option" value="CamCys-&gt;Xle"/>
412 <expand macro="mod_option" value="Ala-&gt;CamCys"/>
413 <expand macro="mod_option" value="Arg-&gt;CamCys"/>
414 <expand macro="mod_option" value="Asn-&gt;CamCys"/>
415 <expand macro="mod_option" value="Asp-&gt;CamCys"/>
416 <expand macro="mod_option" value="Gln-&gt;CamCys"/>
417 <expand macro="mod_option" value="Glu-&gt;CamCys"/>
418 <expand macro="mod_option" value="Gly-&gt;CamCys"/>
419 <expand macro="mod_option" value="His-&gt;CamCys"/>
420 <expand macro="mod_option" value="Lys-&gt;CamCys"/>
421 <expand macro="mod_option" value="Met-&gt;CamCys"/>
422 <expand macro="mod_option" value="Phe-&gt;CamCys"/>
423 <expand macro="mod_option" value="Pro-&gt;CamCys"/>
424 <expand macro="mod_option" value="Ser-&gt;CamCys"/>
425 <expand macro="mod_option" value="Thr-&gt;CamCys"/>
426 <expand macro="mod_option" value="Trp-&gt;CamCys"/>
427 <expand macro="mod_option" value="Tyr-&gt;CamCys"/>
428 <expand macro="mod_option" value="Val-&gt;CamCys"/>
429 <expand macro="mod_option" value="Xle-&gt;CamCys"/>
430 <expand macro="mod_option" value="Cysteinyl"/>
431 <expand macro="mod_option" value="Cysteinyl - carbamidomethyl"/>
432 </xml>
433 <xml name="label">
434 <expand macro="mod_option" value="Arg6"/>
435 <expand macro="mod_option" value="Arg10"/>
436 <expand macro="mod_option" value="Lys4"/>
437 <expand macro="mod_option" value="Lys6"/>
438 <expand macro="mod_option" value="Lys8"/>
439 <expand macro="mod_option" value="DimethLys0"/>
440 <expand macro="mod_option" value="DimethNter0"/>
441 <expand macro="mod_option" value="DimethLys4"/>
442 <expand macro="mod_option" value="DimethNter4"/>
443 <expand macro="mod_option" value="DimethLys8"/>
444 <expand macro="mod_option" value="DimethNter8"/>
445 <expand macro="mod_option" value="18O"/>
446 <expand macro="mod_option" value="ICAT-0"/>
447 <expand macro="mod_option" value="ICAT-9"/>
448 <expand macro="mod_option" value="ICPL-Lys0"/>
449 <expand macro="mod_option" value="ICPL-Nter0"/>
450 <expand macro="mod_option" value="ICPL-Lys4"/>
451 <expand macro="mod_option" value="ICPL-Nter4"/>
452 <expand macro="mod_option" value="ICPL-Lys6"/>
453 <expand macro="mod_option" value="ICPL-Nter6"/>
454 <expand macro="mod_option" value="ICPL-Lys10"/>
455 <expand macro="mod_option" value="ICPL-Nter10"/>
456 <expand macro="mod_option" value="mTRAQ-Lys0"/>
457 <expand macro="mod_option" value="mTRAQ-Nter0"/>
458 <expand macro="mod_option" value="mTRAQ-Lys4"/>
459 <expand macro="mod_option" value="mTRAQ-Nter4"/>
460 <expand macro="mod_option" value="mTRAQ-Lys8"/>
461 <expand macro="mod_option" value="mTRAQ-Nter8"/>
462 <expand macro="mod_option" value="DimethLys2"/>
463 <expand macro="mod_option" value="DimethNter2"/>
464 <expand macro="mod_option" value="DimethLys6"/>
465 <expand macro="mod_option" value="DimethNter6"/>
466 <expand macro="mod_option" value="Leu7"/>
467 <expand macro="mod_option" value="Ile7"/>
468 </xml>
469 <xml name="proteases">
470 <expand macro="mod_option" value="Trypsin"/>
471 <expand macro="mod_option" value="Trypsin/P"/>
472 <expand macro="mod_option" value="LysC"/>
473 <expand macro="mod_option" value="LysC/P"/>
474 <expand macro="mod_option" value="D.P"/>
475 <expand macro="mod_option" value="ArgC"/>
476 <expand macro="mod_option" value="AspC"/>
477 <expand macro="mod_option" value="GluC"/>
478 <expand macro="mod_option" value="GluN"/>
479 <expand macro="mod_option" value="AspN"/>
480 <expand macro="mod_option" value="LysN"/>
481 <expand macro="mod_option" value="Chymotrypsin+"/>
482 <expand macro="mod_option" value="Chymotrypsin"/>
483 </xml>
484 </macros>
485