Mercurial > repos > galaxyp > maxquant

comparison test-data/03/config.yml @ 7:d253b379322b draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit f63ff6d5d0c44012a17e87293811765951655bd5"
author galaxyp
date Mon, 01 Jun 2020 11:51:25 -0400
parents 2133b0be850a
children 0839f84def5e
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6:2133b0be850a 7:d253b379322b
14 lfqStabilizeLargeRatios: True 14 lfqStabilizeLargeRatios: True
15 lfqRequireMsms: True 15 lfqRequireMsms: True
16 advancedSiteIntensities: True 16 advancedSiteIntensities: True
17 matchBetweenRuns: False 17 matchBetweenRuns: False
18 includeContaminants: True 18 includeContaminants: True
19 minPeptideLengthForUnspecificSearch: 8
20 maxPeptideLengthForUnspecificSearch: 25
21 decoyMode: revert
22 peptideFdr: 0.01
23 proteinFdr: 0.01
19 quantMode: 1 24 quantMode: 1
20 restrictProteinQuantification: True 25 restrictProteinQuantification: True
21 restrictMods: [] 26 restrictMods: [Oxidation (M),Acetyl (Protein N-term)]
22 useCounterparts: True 27 useCounterparts: True
23 paramGroups: 28 paramGroups:
24 - files: ['BSA_min_22.mzxml'] 29 - files: ['BSA_min_22.mzxml']
25 maxMissedCleavages: 1 30 maxMissedCleavages: 1
26 fixedModifications: [Carbamidomethyl (C)] 31 fixedModifications: [Carbamidomethyl (C)]