Mercurial > repos > galaxyp > maxquant

view test-data/01/combined/txt/mzTab.mzTab @ 21:8934bc76bb52 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
author galaxyp
date Mon, 19 Jun 2023 17:02:17 +0000
parents 0839f84def5e
children
line wrap: on
line source

MTD	mzTab-version	1.0.0
MTD	mzTab-mode	Complete
MTD	mzTab-type	Identification
MTD	title	null
MTD	description	null
MTD	software[1]	[MS, MS:1001583, MaxQuant,2.0.3.0]
COM	[, CHEMMOD:57.0214637236, Carbamidomethyl (C),]	
MTD	fixed_mod[1]	[, , CHEMMOD:57.0214637236,]
MTD	fixed_mod[1]-site	C
MTD	fixed_mod[1]-position	Anywhere
COM	[, CHEMMOD:15.9949146221, Oxidation (M),]	
MTD	variable_mod[1]	[, , CHEMMOD:15.9949146221,]
MTD	variable_mod[1]-site	M
MTD	variable_mod[1]-position	Anywhere
MTD	protein_search_engine_score[1]	[MS, MS:1002375, protein group-level combined FDRscore, ]
MTD	peptide_search_engine_score[1]	[MS, MS:1001250, local FDR, ]
MTD	psm_search_engine_score[1]	[MS, MS:1002338, Andromeda:score, ]
MTD	psm_search_engine_score[2]	[MS, MS:1002995, Andromeda PEP, ]
MTD	ms_run[1]-format	[MS, , ,]
MTD	ms_run[1]-location	file:///tmp/tmphsgikyer/job_working_directory/000/3/working/BSA_min_23.mzXML
MTD	ms_run[1]-id_format	[MS, , ,]

PRH	accession	description	taxid	species	database	database_version	search_engine	best_search_engine_score[1]	search_engine_score[1]_ms_run[1]	num_psms_ms_run[1]	num_peptides_distinct_ms_run[1]	num_peptides_unique_ms_run[1]	ambiguity_members	modifications	protein_coverage
PRT	CON__P02769	null	null	null	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002337, Andromeda, 2.0.3.0]	6.33205607832812	null	null	null	null	CON__P02769, bsa, CON__P02768-1	null	0.012
PRT	CON__ENSEMBL:ENSBTAP00000001528	null	null	null	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002337, Andromeda, 2.0.3.0]	5.93746772688895	null	null	null	null	CON__ENSEMBL:ENSBTAP00000001528	null	0.008
PRT	CON__ENSEMBL:ENSBTAP00000016046	null	null	null	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002337, Andromeda, 2.0.3.0]	5.97677849538172	null	null	null	null	CON__ENSEMBL:ENSBTAP00000016046	null	0.01
PRT	CON__ENSEMBL:ENSBTAP00000018574	null	null	null	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002337, Andromeda, 2.0.3.0]	5.95544937626172	null	null	null	null	CON__ENSEMBL:ENSBTAP00000018574	null	0.016
PRT	CON__Q03247	null	null	null	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002337, Andromeda, 2.0.3.0]	5.93746772688895	null	null	null	null	CON__Q03247	null	0.025
PRT	CON__Q14CN4-1	null	null	null	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002337, Andromeda, 2.0.3.0]	6.1237531147968	null	null	null	null	CON__Q14CN4-1, CON__Q3SY84, CON__Q9R0H5	null	0.016

PSH	sequence	PSM_ID	accession	unique	database	database_version	search_engine	search_engine_score[1]	search_engine_score[2]	modifications	retention_time	charge	exp_mass_to_charge	calc_mass_to_charge	spectra_ref	pre	post	start	end	opt_global_cv_MS:1000776_scan_number_only_nativeID_format	opt_global_cv_MS:1002217_decoy_peptide
PSM	DSFDIIK	1	CON__ENSEMBL:ENSBTAP00000016046	1	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	0	0.010549248059121	null	0.570428333333333	2	419.2213	419.2213	ms_run[1]:scan=96	R	R	646	652	96	0
PSM	LLESEECR	2	CON__Q14CN4-1	0	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	1.63126590808724	0.00752050293704335	null	0.509571666666667	2	518.2382	518.2424	ms_run[1]:scan=86	K	M	430	437	86	0
PSM	LLESEECR	2	CON__Q3SY84	0	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	1.63126590808724	0.00752050293704335	null	0.509571666666667	2	518.2382	518.2424	ms_run[1]:scan=86	K	M	430	437	86	0
PSM	LLESEECR	2	CON__Q9R0H5	0	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	1.63126590808724	0.00752050293704335	null	0.509571666666667	2	518.2382	518.2424	ms_run[1]:scan=86	K	M	430	437	86	0
PSM	LVTDLTK	3	CON__P02769	0	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	0	0.00465525978542915	null	0.0100133333333333	2	395.2393	395.2395	ms_run[1]:scan=2	K	V	257	263	2	0
PSM	LVTDLTK	3	bsa	0	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	0	0.00465525978542915	null	0.0100133333333333	2	395.2393	395.2395	ms_run[1]:scan=2	K	V	257	263	2	0
PSM	LVTDLTK	3	CON__P02768-1	0	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	0	0.00465525978542915	null	0.0100133333333333	2	395.2393	395.2395	ms_run[1]:scan=2	K	V	257	263	2	0
PSM	QLELEKQLEK	4	CON__ENSEMBL:ENSBTAP00000001528	1	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	0	0.0115486780155693	null	0.570428333333333	3	419.9065	419.9065	ms_run[1]:scan=96	R	Q	408	417	96	0
PSM	SLSAIRER	5	CON__Q03247	1	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	0	0.0115486780155693	null	0.0965533333333333	2	466.2696	466.2696	ms_run[1]:scan=17	R	F	190	197	17	0
PSM	TLGPWGQR	6	CON__ENSEMBL:ENSBTAP00000018574	1	/tmp/tmphsgikyer/files/9/e/a/dataset_9ea3021f-0686-4675-87e9-a4e4f55afbd2.dat;	null	[MS, MS:1002338, Andromeda:score, 2.0.3.0]	0	0.0110802771561295	null	0.425933333333333	2	457.746	457.7458	ms_run[1]:scan=72	R	D	20	27	72	0