Mercurial > repos > galaxyp > maxquant_mqpar

comparison test-data/two/combined/txt/proteinGroups.txt @ 0:256cc0e17454 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit ab4e4f1817080cbe8a031a82cb180610ff140847
author galaxyp
date Sat, 20 Jul 2019 04:53:23 -0400
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-1:000000000000 0:256cc0e17454
1 Protein IDs Majority protein IDs Peptide counts (all) Peptide counts (razor+unique) Peptide counts (unique) Fasta headers Number of proteins Peptides Razor + unique peptides Unique peptides Peptides BSA_min_21.mzXML Peptides BSA_min_22.mzXML Razor + unique peptides BSA_min_21.mzXML Razor + unique peptides BSA_min_22.mzXML Unique peptides BSA_min_21.mzXML Unique peptides BSA_min_22.mzXML Sequence coverage [%] Unique + razor sequence coverage [%] Unique sequence coverage [%] Mol. weight [kDa] Sequence length Sequence lengths Fraction average Fraction 1 Fraction 2 Q-value Score Sequence coverage BSA_min_21.mzXML [%] Sequence coverage BSA_min_22.mzXML [%] Intensity Intensity BSA_min_21.mzXML Intensity BSA_min_22.mzXML MS/MS count Only identified by site Reverse Potential contaminant id Peptide IDs Peptide is razor Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs Oxidation (M) site positions
2 CON__P02769;bsa CON__P02769;bsa 3;3 3;3 3;3 ;bsa sp|P02769|ALBU_BOVIN Serum albumin OS=Bos taurus OX=9913 GN=ALB PE=1 SV=4 2 3 3 3 2 1 2 1 2 1 6.4 6.4 6.4 69.293 607 607;607 1.5 2 2 0 24.411 4.1 2.3 517770 32419 485350 5 + 0 0;1;6 True;True;True 0;1;6 0;1;2;9 0;1;2;3;11 0;1;11
3 CON__P01030;CON__ENSEMBL:ENSBTAP00000007350 CON__P01030;CON__ENSEMBL:ENSBTAP00000007350 1;1 1;1 1;1 ; 2 1 1 1 1 0 1 0 1 0 0.6 0.6 0.6 192.79 1741 1741;1742 1 1 0 6.1295 0.6 0 0 0 0 1 + 1 3 True 3 4 5 5
4 CON__P02676 CON__P02676 1 1 1 1 1 1 1 1 0 1 0 1 0 2.8 2.8 2.8 56.44 495 495 1 2 0 5.9117 2.8 0 114330 114330 0 2 + 2 5 True 5 7;8 9;10 9
5 CON__Q29443;CON__Q0IIK2 CON__Q29443;CON__Q0IIK2 1;1 1;1 1;1 ; 2 1 1 1 1 0 1 0 1 0 1.8 1.8 1.8 75.829 685 685;704 1 2 0 6.2709 1.8 0 137580 137580 0 3 + 3 4 True 4 5;6 6;7;8 6
6 CON__Q6IFU6 CON__Q6IFU6 1 1 1 1 1 1 1 1 0 1 0 1 0 3.5 3.5 3.5 55.651 491 491 1 1 0 5.7956 3.5 0 0 0 0 1 + 4 2 True 2 3 4 4