view test-data/txt/modificationSpecificPeptides.txt @ 3:2d67fb758956 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
author galaxyp
date Sat, 11 Apr 2020 11:50:09 -0400
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Sequence	Modifications	Mass	Mass Fractional Part	Protein Groups	Proteins	Unique (Groups)	Unique (Proteins)	Acetyl (Protein N-term)	Oxidation (M)	Missed cleavages	Retention time	Calibrated retention time	Charges	PEP	MS/MS scan number	Raw file	Score	Delta score	Reverse	Potential contaminant	Intensity	id	Protein group IDs	Peptide ID	Evidence IDs	MS/MS IDs	Best MS/MS	Oxidation (M) site IDs	MS/MS Count
AEFVEVTK	Unmodified	921.48075	0.48074791	0	CON__P02769;bsa	yes	no	0	0	0	0.52947	0.52947	2	0.010981	85	BSA_min_21	3.3922	3.3922		+	43020	0	0	0	0	0	0		0
DDPHACYSTVFDK	Unmodified	1553.6457	0.64565776	0	CON__P02769;bsa	yes	no	0	0	0	0.47149	0.47149	2	0.0081868	82	BSA_min_21	0	0		+	32419	1	0	1	1	1	1		1
ECCHGDLLECADDR	Unmodified	1748.6553	0.65525294	0	CON__P02769;bsa	yes	no	0	0	0	0.46522	0.46522	2;3	0.011617	60	BSA_min_22	4.06	4.06		+	485350	2	0	2	2;3	2;3;4	2		3
FNETTEK	Unmodified	867.39741	0.39741221	8	CON__REFSEQ:XP_585019	yes	yes	0	0	0	0.54676	0.54676	1	0.0062991	57	BSA_min_21	0	0		+	40514	3	8	3	4	5	5		0
GCTTTNSPSTPCQNCSR	Unmodified	1926.7618	0.76184328	7	CON__Q6IFU6	yes	yes	0	0	0	0.26375	0.26375	2	0.016056	45	BSA_min_21	0	0		+	0	4	7	4	5	6	6		1
GETGPAGPSGAPGPAGSR	Unmodified	1521.7172	0.71718322	4	CON__P04258	yes	yes	0	0	0	0.091825	0.091825	3	0.014811	16	BSA_min_21	0	0		+	0	5	4	5	6	7	7		1
LGQYTSPVAK	Unmodified	1062.571	0.5709599	1	CON__P01030;CON__ENSEMBL:ENSBTAP00000007350	yes	no	0	0	0	0.057288	0.057288	2	0.0086806	10	BSA_min_21	9.2141	9.2141		+	0	6	1	6	7	8	8		1
TSDANINWNNLK	Unmodified	1388.6684	0.66844211	6	CON__Q29443;CON__Q0IIK2	yes	no	0	0	0	0.41393	0.41393	2;3	0.0052683	98	BSA_min_21	2.8669	2.8669		+	137580	7	6	7	8;9	9;10;11	10		3
VLDQYIFELSR	Unmodified	1381.7242	0.72416608	2	CON__Q3MHN5;CON__ENSEMBL:ENSBTAP00000018229	yes	no	0	0	0	0.50384	0.50384	2	0.01812	48	BSA_min_22	0	0		+	89423	8	2	8	10	12	12		0
VLYDAEISQIHQSVTDTNVILSMDNSR	Unmodified	3047.487	0.48697886	5	CON__P35908v2;CON__P35908	yes	no	0	0	0	0.35628	0.35628	6	0.0020659	73	BSA_min_21	0	0		+	26948	9	5	9	11	13	13		0
YCGVPGEYWLGNDR	Unmodified	1684.7304	0.73039044	3	CON__P02676	yes	yes	0	0	0	0.51128	0.51128	2;3	0.011617	80	BSA_min_21	0	0		+	114330	10	3	10	12;13	14;15	14		2
YICDNQDTISSK	Unmodified	1442.6348	0.63475872	0	CON__P02769;bsa	yes	no	0	0	0	0.25827	0.25827	2	4.413E-09	44	BSA_min_21	24.343	7.7115		+	0	11	0	11	14	16	16		1