Mercurial > repos > galaxyp > metaquantome_db

comparison test-data/tax_test_out.tab @ 1:7c45aa1c9464 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/metaquantome commit 74c403057350af3dde81aea154414a0d6a84d2a3"
author galaxyp
date Wed, 23 Sep 2020 17:03:13 +0000
parents f1834b310c09
children
comparison
equal deleted inserted replaced
0:f1834b310c09 1:7c45aa1c9464
1 id taxon_name rank NS_mean WS_mean X730NS X730WS X733NS X733WS X734NS X734WS X737NS X737WS X760NS X760WS X769NS X769WS X781NS X781WS X795NS X795WS X852NS X852WS X861NS X861WS X866NS X866WS X867NS X867WS X730NS_n_peptide X730WS_n_peptide X733NS_n_peptide X733WS_n_peptide X734NS_n_peptide X734WS_n_peptide X737NS_n_peptide X737WS_n_peptide X760NS_n_peptide X760WS_n_peptide X769NS_n_peptide X769WS_n_peptide X781NS_n_peptide X781WS_n_peptide X795NS_n_peptide X795WS_n_peptide X852NS_n_peptide X852WS_n_peptide X861NS_n_peptide X861WS_n_peptide X866NS_n_peptide X866WS_n_peptide X867NS_n_peptide X867WS_n_peptide X730NS_n_samp_children X730WS_n_samp_children X733NS_n_samp_children X733WS_n_samp_children X734NS_n_samp_children X734WS_n_samp_children X737NS_n_samp_children X737WS_n_samp_children X760NS_n_samp_children X760WS_n_samp_children X769NS_n_samp_children X769WS_n_samp_children X781NS_n_samp_children X781WS_n_samp_children X795NS_n_samp_children X795WS_n_samp_children X852NS_n_samp_children X852WS_n_samp_children X861NS_n_samp_children X861WS_n_samp_children X866NS_n_samp_children X866WS_n_samp_children X867NS_n_samp_children X867WS_n_samp_children log2fc_NS_over_WS p corrected_p 1 id taxon_name rank NS_mean WS_mean X730NS X730WS X733NS X733WS X734NS X734WS X737NS X737WS X760NS X760WS X769NS X769WS X781NS X781WS X795NS X795WS X852NS X852WS X861NS X861WS X866NS X866WS X867NS X867WS X730NS_n_peptide X730WS_n_peptide X733NS_n_peptide X733WS_n_peptide X734NS_n_peptide X734WS_n_peptide X737NS_n_peptide X737WS_n_peptide X760NS_n_peptide X760WS_n_peptide X769NS_n_peptide X769WS_n_peptide X781NS_n_peptide X781WS_n_peptide X795NS_n_peptide X795WS_n_peptide X852NS_n_peptide X852WS_n_peptide X861NS_n_peptide X861WS_n_peptide X866NS_n_peptide X866WS_n_peptide X867NS_n_peptide X867WS_n_peptide X730NS_n_samp_children X730WS_n_samp_children X733NS_n_samp_children X733WS_n_samp_children X734NS_n_samp_children X734WS_n_samp_children X737NS_n_samp_children X737WS_n_samp_children X760NS_n_samp_children X760WS_n_samp_children X769NS_n_samp_children X769WS_n_samp_children X781NS_n_samp_children X781WS_n_samp_children X795NS_n_samp_children X795WS_n_samp_children X852NS_n_samp_children X852WS_n_samp_children X861NS_n_samp_children X861WS_n_samp_children X866NS_n_samp_children X866WS_n_samp_children X867NS_n_samp_children X867WS_n_samp_children log2fc_NS_over_WS p_NS_over_WS corrected_p_NS_over_WS
2 157 Treponema genus 22.4592368471399 23.25164166545661 21.782210465654984 22.29366320170161 19.506474847066862 18.393389679254238 21.31060467932299 21.728055628093554 20.480986062363687 22.602867980613627 23.203993721974225 23.566696765176243 22.313857374707805 25.335612959036755 24.564206593926965 23.758132985051397 21.865153582932077 21.378622826723475 22.004619704258204 23.01330290131711 21.929889350172612 22.77047366650371 22.145836211855425 22.482730706742693 22.080359413733433 23.436551973678235 9.0 3.0 2.0 2.0 6.0 11.0 8.0 10.0 10.0 10.0 7.0 5.0 15.0 9.0 4.0 6.0 8.0 13.0 12.0 6.0 5.0 5.0 14.0 8.0 5.0 2.0 2.0 1.0 4.0 6.0 4.0 4.0 5.0 5.0 4.0 2.0 4.0 3.0 3.0 1.0 4.0 3.0 5.0 3.0 3.0 2.0 6.0 4.0 -0.7924048183167116 0.10596880912720232 0.22157114635687755 2 157 Treponema genus 22.4592368471399 23.25164166545661 21.782210465654984 22.29366320170161 19.506474847066862 18.393389679254238 21.31060467932299 21.728055628093554 20.480986062363687 22.602867980613627 23.203993721974225 23.566696765176243 22.313857374707805 25.335612959036755 24.564206593926965 23.758132985051397 21.865153582932077 21.378622826723475 22.004619704258204 23.01330290131711 21.929889350172612 22.77047366650371 22.145836211855425 22.482730706742693 22.080359413733433 23.436551973678235 9.0 3.0 2.0 2.0 6.0 11.0 8.0 10.0 10.0 10.0 7.0 5.0 15.0 9.0 4.0 6.0 8.0 13.0 12.0 6.0 5.0 5.0 14.0 8.0 5.0 2.0 2.0 1.0 4.0 6.0 4.0 4.0 5.0 5.0 4.0 2.0 4.0 3.0 3.0 1.0 4.0 3.0 5.0 3.0 3.0 2.0 6.0 4.0 -0.7924048183167116 0.10596880912720232 0.22157114635687755
3 194 Campylobacter genus 22.737726781977898 23.402014527754694 19.374983778535537 20.606446832930114 22.374052312423657 22.175914745445667 20.710711088017703 21.497720060388442 21.935778024142905 21.360868814816588 19.67510328882646 18.442382745355207 21.21818802567592 18.98249372666148 25.95861986611441 24.365465047288765 19.540072068600086 22.271211580494718 17.998259192791753 26.353858284366478 18.911902395646823 20.233239126385538 19.83361162568149 19.261402979800614 20.129527247691183 22.479579021998745 3.0 5.0 2.0 5.0 2.0 7.0 25.0 5.0 7.0 4.0 17.0 3.0 209.0 8.0 4.0 9.0 4.0 8.0 3.0 5.0 7.0 4.0 7.0 6.0 2.0 2.0 2.0 3.0 2.0 4.0 2.0 3.0 2.0 2.0 3.0 2.0 4.0 4.0 2.0 3.0 2.0 4.0 2.0 3.0 2.0 2.0 2.0 4.0 -0.6642877457767966 0.27265646879500405 0.41807325215233954 3 194 Campylobacter genus 22.737726781977898 23.402014527754694 19.374983778535537 20.606446832930114 22.374052312423657 22.175914745445667 20.710711088017703 21.497720060388442 21.935778024142905 21.360868814816588 19.67510328882646 18.442382745355207 21.21818802567592 18.98249372666148 25.95861986611441 24.365465047288765 19.540072068600086 22.271211580494718 17.998259192791753 26.353858284366478 18.911902395646823 20.233239126385538 19.83361162568149 19.261402979800614 20.129527247691183 22.479579021998745 3.0 5.0 2.0 5.0 2.0 7.0 25.0 5.0 7.0 4.0 17.0 3.0 209.0 8.0 4.0 9.0 4.0 8.0 3.0 5.0 7.0 4.0 7.0 6.0 2.0 2.0 2.0 3.0 2.0 4.0 2.0 3.0 2.0 2.0 3.0 2.0 4.0 4.0 2.0 3.0 2.0 4.0 2.0 3.0 2.0 2.0 2.0 4.0 -0.6642877457767966 0.27265646879500405 0.41807325215233954
4 286 Pseudomonas genus 22.84530963528067 20.941262344966106 19.390653532195216 21.257892314732068 23.40900039680405 21.249447306145736 22.85533086446144 17.189270329854693 21.43373289557238 18.940290665716926 21.2755581152792 21.78465732920301 19.42254043551283 17.888724701002317 22.016714341281943 20.86953224363516 18.685241717022148 22.54333528743205 20.234005329853034 18.807506861121887 23.765290496984004 16.805950901945454 25.39397860675149 22.523625447598253 19.404033335324762 14.425011898222733 2.0 4.0 2.0 7.0 11.0 3.0 4.0 6.0 7.0 4.0 4.0 2.0 16.0 8.0 2.0 7.0 5.0 5.0 6.0 3.0 6.0 4.0 5.0 1.0 1.0 1.0 1.0 2.0 3.0 NA 2.0 2.0 2.0 2.0 2.0 NA 3.0 3.0 2.0 3.0 3.0 1.0 2.0 NA 3.0 NA 2.0 1.0 1.9040472903145655 0.06467168750236378 0.15657355921624916 4 286 Pseudomonas genus 22.84530963528067 20.941262344966106 19.390653532195216 21.257892314732068 23.40900039680405 21.249447306145736 22.85533086446144 17.189270329854693 21.43373289557238 18.940290665716926 21.2755581152792 21.78465732920301 19.42254043551283 17.888724701002317 22.016714341281943 20.86953224363516 18.685241717022148 22.54333528743205 20.234005329853034 18.807506861121887 23.765290496984004 16.805950901945454 25.39397860675149 22.523625447598253 19.404033335324762 14.425011898222733 2.0 4.0 2.0 7.0 11.0 3.0 4.0 6.0 7.0 4.0 4.0 2.0 16.0 8.0 2.0 7.0 5.0 5.0 6.0 3.0 6.0 4.0 5.0 1.0 1.0 1.0 1.0 2.0 3.0 NA 2.0 2.0 2.0 2.0 2.0 NA 3.0 3.0 2.0 3.0 3.0 1.0 2.0 NA 3.0 NA 2.0 1.0 1.9040472903145655 0.06467168750236378 0.15657355921624916
5 356 Rhizobiales order 24.69225559146653 24.47928415080033 24.213805954712 26.19612910182332 23.852474395772273 20.88389298705434 24.072293206158825 24.6359011866213 23.253772028711925 23.84124611127577 25.211843229277033 23.37465798633904 24.971694694445386 23.732993264497427 25.466853125051237 22.51337324493513 23.333984301104184 22.80206380634942 24.48437767254155 26.42825613354465 25.06992046020705 22.354137707550287 23.963063933116196 23.69000244474017 25.821578844423875 23.67883580727921 18.0 10.0 13.0 10.0 12.0 24.0 14.0 11.0 12.0 15.0 20.0 7.0 21.0 13.0 17.0 17.0 18.0 17.0 16.0 11.0 15.0 10.0 21.0 9.0 5.0 4.0 5.0 4.0 5.0 5.0 4.0 5.0 4.0 5.0 5.0 4.0 4.0 4.0 5.0 5.0 5.0 5.0 3.0 4.0 3.0 4.0 5.0 5.0 0.21297144066620177 0.0734883472918226 0.16902319877119198 5 356 Rhizobiales order 24.69225559146653 24.47928415080033 24.213805954712 26.19612910182332 23.852474395772273 20.88389298705434 24.072293206158825 24.6359011866213 23.253772028711925 23.84124611127577 25.211843229277033 23.37465798633904 24.971694694445386 23.732993264497427 25.466853125051237 22.51337324493513 23.333984301104184 22.80206380634942 24.48437767254155 26.42825613354465 25.06992046020705 22.354137707550287 23.963063933116196 23.69000244474017 25.821578844423875 23.67883580727921 18.0 10.0 13.0 10.0 12.0 24.0 14.0 11.0 12.0 15.0 20.0 7.0 21.0 13.0 17.0 17.0 18.0 17.0 16.0 11.0 15.0 10.0 21.0 9.0 5.0 4.0 5.0 4.0 5.0 5.0 4.0 5.0 4.0 5.0 5.0 4.0 4.0 4.0 5.0 5.0 5.0 5.0 3.0 4.0 3.0 4.0 5.0 5.0 0.21297144066620177 0.0734883472918226 0.16902319877119198
6 481 Neisseriaceae family 28.278684423613377 23.578683124887306 26.27962488726382 21.380348299519405 20.265011634052573 23.91010523361957 25.25318938906157 23.33599556737296 29.37660244007165 24.118713642422897 29.31449688863017 24.155079469088264 27.84869359057641 23.955877447655148 26.053970602682014 22.206147855022408 26.13696167363647 24.218827734120907 30.53641005463977 21.765106446060415 28.260904828623552 24.25663214471386 27.118776073693013 23.408432498906212 23.31084301358886 23.098763696810842 97.0 4.0 2.0 9.0 49.0 28.0 726.0 27.0 710.0 13.0 373.0 5.0 12.0 14.0 90.0 13.0 1287.0 21.0 213.0 11.0 241.0 7.0 21.0 10.0 3.0 2.0 1.0 1.0 4.0 3.0 4.0 4.0 4.0 3.0 4.0 1.0 3.0 3.0 5.0 2.0 4.0 4.0 3.0 3.0 3.0 3.0 3.0 3.0 4.700001298726072 0.00268017172806849 0.01860074352225949 6 481 Neisseriaceae family 28.278684423613377 23.578683124887306 26.27962488726382 21.380348299519405 20.265011634052573 23.91010523361957 25.25318938906157 23.33599556737296 29.37660244007165 24.118713642422897 29.31449688863017 24.155079469088264 27.84869359057641 23.955877447655148 26.053970602682014 22.206147855022408 26.13696167363647 24.218827734120907 30.53641005463977 21.765106446060415 28.260904828623552 24.25663214471386 27.118776073693013 23.408432498906212 23.31084301358886 23.098763696810842 97.0 4.0 2.0 9.0 49.0 28.0 726.0 27.0 710.0 13.0 373.0 5.0 12.0 14.0 90.0 13.0 1287.0 21.0 213.0 11.0 241.0 7.0 21.0 10.0 3.0 2.0 1.0 1.0 4.0 3.0 4.0 4.0 4.0 3.0 4.0 1.0 3.0 3.0 5.0 2.0 4.0 4.0 3.0 3.0 3.0 3.0 3.0 3.0 4.700001298726072 0.00268017172806849 0.01860074352225949