Mercurial > repos > galaxyp > mqppep_preproc
annotate test-data/test_regulatory_sites.tabular @ 4:5c2beb4eb41c draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 1c1dbc5a9838e5cd45724b6e53246eb80437e1f1
| author | galaxyp |
|---|---|
| date | Tue, 14 Feb 2023 17:37:36 +0000 |
| parents | 8dfd5d2b5903 |
| children |
| rev | line source |
|---|---|
|
0
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
1 32017 |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
2 "PhosphoSitePlus(R) (PSP) was created by Cell Signaling Technology Inc. It is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. When using PSP data or analyses in printed publications or in online resources, the following acknowledgements must be included: (a) the words ""PhosphoSitePlus(R), www.phosphosite.org"" must be included at appropriate places in the text or webpage, and (b) the following citation must be included in the bibliography: ""Hornbeck PV, Zhang B, Murray B, Kornhauser JM, Latham V, Skrzypek E PhosphoSitePlus, 2014: mutations, PTMs and recalibrations. Nucleic Acids Res. 2015 43:D512-20. PMID: 25514926.""" |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
3 |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
4 GENE PROTEIN PROT_TYPE ACC_ID GENE_ID HU_CHR_LOC ORGANISM MOD_RSD SITE_GRP_ID SITE_+/-7_AA DOMAIN ON_FUNCTION ON_PROCESS ON_PROT_INTERACT ON_OTHER_INTERACT PMIDs LT_LIT MS_LIT MS_CST NOTES |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
5 ENSA ENSA "Inhibitor; Protein phosphatase, regulatory subunit" O43768 2029 1q21.3 human S109-p 477819 DLPQRKSsLVTSKLA Endosulfine "molecular association, regulation; protein conformation" SNCA(DISRUPTS) 18973346 1 34 50 |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
6 VAMP8 VAMP8 "Membrane protein, integral; Vesicle" Q9BV40 8673 2p11.2 human S55-p 12738929 TEDLEATsEHFKTTS Synaptobrevin "activity, inhibited" 27402227 1 8 0 "abolish function in SNARE complex during mast cell secretion, reduces in vitro ensemble vesicle fusion" |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
7 ENSA ENSA "Inhibitor; Protein phosphatase, regulatory subunit" O43768 2029 1q21.3 human S67-p 455934 KGQKYFDsGDYNMAK Endosulfine "molecular association, regulation" cell cycle regulation PPP2CA(INDUCES) 27889260 3 56 47 |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
8 Vamp4 VAMP4 "Membrane protein, integral; Vesicle" O70480 53330 1 H2.1|1 70.29 cM mouse S30-p 454285 RNLLEDDsDEEEDFF "molecular association, regulation; intracellular localization" PACS-1(INDUCES) 14608369 1 64 10 |
|
8dfd5d2b5903
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff
changeset
|
9 EPHA4 EphA4 "EC 2.7.10.1; KINASE; Kinase, protein; Membrane protein, integral; Protein kinase, TK; Protein kinase, tyrosine (receptor)" P54764 2043 2q36.1 human Y602-p 450857 TYVDPFTyEDPNQAV EphA2_TM "molecular association, regulation" Fyn(INDUCES) 8622893 6 16 155 |