Mercurial > repos > galaxyp > ms2preproc
diff README.md @ 0:59e5d8c53c81 draft
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author | galaxyp |
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date | Wed, 19 Dec 2012 00:27:24 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.md Wed Dec 19 00:27:24 2012 -0500 @@ -0,0 +1,44 @@ +# ms2preproc + +This repository contains a tool wrapper for ms2preproc. + +http://hci.iwr.uni-heidelberg.de/MIP/Software/ms2preproc.php + +This tool requires Galaxy to be equipped with common proteomic +datatypes. These can be obtained by installing Ira Cooke's ProtK via +the tool shed or merging the changesets from the following repository +into your Galaxy instance: + + https://bitbucket.org/galaxyp/galaxy-dist-proteomics + +# Installing + +This tool wrapper requires ms2preproc to be installed. + +For Galaxy-P we are installing this tool via CloudBioLinux +(https://github.com/jmchilton/cloudbiolinux/blob/proteomics/cloudbio/custom/bio_proteomics.py). While +this fabric script may not be exactly appropriate for your environment +it may serve as a template for how to install this software. + +# Obtaining Tools + +Repositories for all Galaxy-P tools can be found at +https:/bitbucket.org/galaxyp/. + +# Contact + +Please send suggestions for improvements and bug reports to +jmchilton@gmail.com. + +# License + +All Galaxy-P tools are licensed under the Apache License Version 2.0 +unless otherwise documented. + +# Tool Versioning + +Galaxy-P tools will have versions of the form X.Y.Z. Versions +differing only after the second decimal should be completely +compatible with each other. Breaking changes should result in an +increment of the number before and/or after the first decimal. All +tools of version less than 1.0.0 should be considered beta.