Mercurial > repos > galaxyp > msconvert
comparison test-data/small-analyzer-filter.mzML @ 10:9d5de24e6ef7 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit d595e3cfe190a61d81005f9be7c2652aa5f91292
author | galaxyp |
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date | Sat, 23 Feb 2019 06:25:48 -0500 |
parents | dd4ba10d0c45 |
children | 6153e8ada1ee |
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9:dd4ba10d0c45 | 10:9d5de24e6ef7 |
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1 <?xml version="1.0" encoding="utf-8"?> | 1 <?xml version="1.0" encoding="utf-8"?> |
2 <indexedmzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.2_idx.xsd"> | 2 <indexedmzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.2_idx.xsd"> |
3 <mzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" id="small" version="1.1.0"> | 3 <mzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" id="small" version="1.1.0"> |
4 <cvList count="2"> | 4 <cvList count="2"> |
5 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="3.79.0" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/> | 5 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="4.1.12" URI="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo"/> |
6 <cv id="UO" fullName="Unit Ontology" version="12:10:2011" URI="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo"/> | 6 <cv id="UO" fullName="Unit Ontology" version="09:04:2014" URI="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo"/> |
7 </cvList> | 7 </cvList> |
8 <fileDescription> | 8 <fileDescription> |
9 <fileContent> | 9 <fileContent> |
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12 </fileContent> | 12 </fileContent> |
13 <sourceFileList count="3"> | 13 <sourceFileList count="3"> |
14 <sourceFile id="RAW1" name="small.RAW" location="file:///C:\pwiz-src\trunk\pwiz\example_data"> | 14 <sourceFile id="RAW1" name="small.RAW" location="file:///"> |
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21 </sourceFile> | 21 </sourceFile> |
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28 <referenceableParamGroup id="CommonInstrumentParams"> | 28 <referenceableParamGroup id="CommonInstrumentParams"> |
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31 </referenceableParamGroup> | 31 </referenceableParamGroup> |
32 </referenceableParamGroupList> | 32 </referenceableParamGroupList> |
33 <softwareList count="3"> | 33 <softwareList count="4"> |
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42 </software> | 45 </software> |
43 </softwareList> | 46 </softwareList> |
44 <instrumentConfigurationList count="2"> | 47 <instrumentConfigurationList count="2"> |
45 <instrumentConfiguration id="IC1"> | 48 <instrumentConfiguration id="IC1"> |
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82 </processingMethod> | 85 </processingMethod> |
83 </dataProcessing> | 86 </dataProcessing> |
84 <dataProcessing id="pwiz_Reader_conversion"> | 87 <dataProcessing id="pwiz_Reader_conversion"> |
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87 </processingMethod> | 90 </processingMethod> |
88 <processingMethod order="1" softwareRef="pwiz_3.0.8990"> | 91 <processingMethod order="1" softwareRef="pwiz_3.0.19038"> |
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92 </dataProcessingList> | 95 </dataProcessingList> |
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