Mercurial > repos > galaxyp > msconvert
view test-data/SciexTest-HPINalone.mzML @ 17:ab6c14374bc0 draft default tip
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit e3d24f3dc7a9812f8fa4447c9391e5bd3b5d4dc6
author | galaxyp |
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date | Thu, 15 Aug 2024 16:19:28 +0000 |
parents | 6153e8ada1ee |
children |
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<?xml version="1.0" encoding="utf-8"?> <indexedmzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.2_idx.xsd"> <mzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" id="SciexTest-HPINalone" version="1.1.0"> <cvList count="2"> <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="4.1.41" URI="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo"/> <cv id="UO" fullName="Unit Ontology" version="09:04:2014" URI="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo"/> </cvList> <fileDescription> <fileContent> <cvParam cvRef="MS" accession="MS:1001473" name="selected reaction monitoring chromatogram" value=""/> </fileContent> 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accession="MS:1000615" name="ProteoWizard software" value=""/> </software> </softwareList> <instrumentConfigurationList count="1"> <instrumentConfiguration id="IC1"> <cvParam cvRef="MS" accession="MS:1000139" name="4000 QTRAP" value=""/> <cvParam cvRef="MS" accession="MS:1000529" name="instrument serial number" value="U016980608"/> <componentList count="5"> <source order="1"> <cvParam cvRef="MS" accession="MS:1000073" name="electrospray ionization" value=""/> </source> <analyzer order="2"> <cvParam cvRef="MS" accession="MS:1000081" name="quadrupole" value=""/> </analyzer> <analyzer order="3"> <cvParam cvRef="MS" accession="MS:1000081" name="quadrupole" value=""/> </analyzer> <analyzer order="4"> <cvParam cvRef="MS" accession="MS:1000078" name="axial ejection linear ion trap" value=""/> </analyzer> <detector order="5"> <cvParam cvRef="MS" accession="MS:1000253" name="electron multiplier" value=""/> </detector> </componentList> <softwareRef ref="Analyst"/> </instrumentConfiguration> </instrumentConfigurationList> <dataProcessingList count="1"> <dataProcessing id="pwiz_Reader_ABI_conversion"> <processingMethod order="0" softwareRef="pwiz_Reader_ABI"> <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value=""/> </processingMethod> </dataProcessing> </dataProcessingList> <run id="SciexTest-HPINalone" defaultInstrumentConfigurationRef="IC1" startTimeStamp="2008-11-30T22:10:23Z" defaultSourceFileRef="WIFF"> <chromatogramList count="40" defaultDataProcessingRef="pwiz_Reader_ABI_conversion"> <chromatogram index="0" id="TIC" defaultArrayLength="1353"> <cvParam cvRef="MS" accession="MS:1000235" name="total ion current chromatogram" value=""/> <binaryDataArrayList count="3"> <binaryDataArray encodedLength="10256"> <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value=""/> <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value=""/> <cvParam cvRef="MS" accession="MS:1000595" name="time array" value="" unitCvRef="UO" 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