Mercurial > repos > galaxyp > msgfplus

annotate test-data/201208-378803-msgf_20161026-50ppm-semitryptic-no_mods.mzid @ 6:4b7d768b74d3 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit 11837caf01413f2657b529b7cd7a4ec0960110fa
author galaxyp
date Fri, 27 Oct 2017 13:04:49 -0400
parents 058a2ab1d462
children
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1 <?xml version="1.0" encoding="UTF-8"?>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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2 <MzIdentML xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" id="MS-GF+" version="1.1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2016-11-10T20:16:49">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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4 <cv fullName="PSI-MS" version="3.30.0" uri="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo" id="PSI-MS"/>
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5 <cv fullName="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" id="UNIMOD"/>
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6 <cv fullName="UNIT-ONTOLOGY" uri="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo" id="UO"/>
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7 </cvList>
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8 <AnalysisSoftwareList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
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9 <AnalysisSoftware version="Release (v2016.10.26)" id="ID_software" name="MS-GF+">
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10 <SoftwareName>
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12 </SoftwareName>
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13 </AnalysisSoftware>
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14 </AnalysisSoftwareList>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
196 <DBSequence length="213" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528953234|ref|XP_005208080.1|" id="DBSeq78837"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
197 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528953236|ref|XP_005208081.1|" id="DBSeq79051"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
198 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528953238|ref|XP_005208082.1|" id="DBSeq79258"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
199 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528953240|ref|XP_005208083.1|" id="DBSeq79465"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
200 <DBSequence length="177" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528953246|ref|XP_005208086.1|" id="DBSeq79672"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
201 <DBSequence length="214" searchDatabase_ref="SearchDB_1" accession="XXX_gi|30794348|ref|NP_851372.1|" id="DBSeq100983"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
202 <Peptide id="Pep_ISELFDKLDSMSVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
203 <PeptideSequence>ISELFDKLDSMSVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
204 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
205 <Peptide id="Pep_PKNDPKLKTQGK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
206 <PeptideSequence>PKNDPKLKTQGK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
207 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
208 <Peptide id="Pep_EPISVSSQQMLK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
209 <PeptideSequence>EPISVSSQQMLK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
210 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
211 <Peptide id="Pep_VWGFKVAGAQDEGK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
212 <PeptideSequence>VWGFKVAGAQDEGK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
213 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
214 <Peptide id="Pep_PTAEFQDR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
215 <PeptideSequence>PTAEFQDR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
216 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
217 <Peptide id="Pep_TVMENFVAFVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
218 <PeptideSequence>TVMENFVAFVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
219 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
220 <Peptide id="Pep_ESRCSRESRCSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
221 <PeptideSequence>ESRCSRESRCSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
222 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
223 <Peptide id="Pep_ACCEELTAEYEKALR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
224 <PeptideSequence>ACCEELTAEYEKALR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
225 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
226 <Peptide id="Pep_EVEDEGFLR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
227 <PeptideSequence>EVEDEGFLR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
228 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
229 <Peptide id="Pep_MHQIYVQCAKL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
230 <PeptideSequence>MHQIYVQCAKL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
231 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
232 <Peptide id="Pep_KKYMRWMNHKKSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
233 <PeptideSequence>KKYMRWMNHKKSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
234 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
235 <Peptide id="Pep_LAEAEKEGR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
236 <PeptideSequence>LAEAEKEGR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
237 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
238 <Peptide id="Pep_AEMFEHLSEK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
239 <PeptideSequence>AEMFEHLSEK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
240 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
241 <Peptide id="Pep_SFNQEPQYR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
242 <PeptideSequence>SFNQEPQYR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
243 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
244 <Peptide id="Pep_SKVNNYFWELSQTR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
245 <PeptideSequence>SKVNNYFWELSQTR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
246 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
247 <Peptide id="Pep_PNTEPTHHFI">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
248 <PeptideSequence>PNTEPTHHFI</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
249 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
250 <Peptide id="Pep_EGVAICKAGFR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
251 <PeptideSequence>EGVAICKAGFR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
252 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
253 <Peptide id="Pep_QLEDILVLAK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
254 <PeptideSequence>QLEDILVLAK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
255 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
256 <Peptide id="Pep_AAQGALQPSL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
257 <PeptideSequence>AAQGALQPSL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
258 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
259 <Peptide id="Pep_VNPVTALTLLEKMK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
260 <PeptideSequence>VNPVTALTLLEKMK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
261 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
262 <Peptide id="Pep_FEIWVELLKYLEEIRGK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
263 <PeptideSequence>FEIWVELLKYLEEIRGK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
264 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
265 <Peptide id="Pep_TIFDTEIESTSPK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
266 <PeptideSequence>TIFDTEIESTSPK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
267 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
268 <Peptide id="Pep_DTNIQICR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
269 <PeptideSequence>DTNIQICR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
270 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
271 <Peptide id="Pep_QLEGRLQDLR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
272 <PeptideSequence>QLEGRLQDLR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
273 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
274 <Peptide id="Pep_RAFQECER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
275 <PeptideSequence>RAFQECER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
276 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
277 <Peptide id="Pep_LECTNLYR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
278 <PeptideSequence>LECTNLYR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
279 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
280 <Peptide id="Pep_LMLLSRDDSGSGSK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
281 <PeptideSequence>LMLLSRDDSGSGSK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
282 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
283 <Peptide id="Pep_ATEGTQLFNDYCEQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
284 <PeptideSequence>ATEGTQLFNDYCEQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
285 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
286 <Peptide id="Pep_IQNGALNCEEKLTLAK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
287 <PeptideSequence>IQNGALNCEEKLTLAK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
288 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
289 <Peptide id="Pep_CVCDECGRGFGFK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
290 <PeptideSequence>CVCDECGRGFGFK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
291 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
292 <Peptide id="Pep_RMMESRQR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
293 <PeptideSequence>RMMESRQR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
294 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
295 <Peptide id="Pep_RSDVEQLDQEIK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
296 <PeptideSequence>RSDVEQLDQEIK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
297 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
298 <Peptide id="Pep_WQEYQSRVD">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
299 <PeptideSequence>WQEYQSRVD</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
300 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
301 <Peptide id="Pep_RKFIIHRGKRKAAQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
302 <PeptideSequence>RKFIIHRGKRKAAQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
303 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
304 <Peptide id="Pep_VKDIVNLTDVNP">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
305 <PeptideSequence>VKDIVNLTDVNP</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
306 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
307 <Peptide id="Pep_KELVDQRYDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
308 <PeptideSequence>KELVDQRYDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
309 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
310 <Peptide id="Pep_QNIDRCYPER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
311 <PeptideSequence>QNIDRCYPER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
312 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
313 <Peptide id="Pep_QLAQQTEQKGCR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
314 <PeptideSequence>QLAQQTEQKGCR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
315 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
316 <Peptide id="Pep_IFELEEH">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
317 <PeptideSequence>IFELEEH</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
318 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
319 <Peptide id="Pep_VFEEMIEPYCLHESCK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
320 <PeptideSequence>VFEEMIEPYCLHESCK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
321 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
322 <Peptide id="Pep_GLRFDWSLR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
323 <PeptideSequence>GLRFDWSLR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
324 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
325 <Peptide id="Pep_VLETLGINKRKIVNQLSNSLTR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
326 <PeptideSequence>VLETLGINKRKIVNQLSNSLTR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
327 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
328 <Peptide id="Pep_DPDNSIELE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
329 <PeptideSequence>DPDNSIELE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
330 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
331 <Peptide id="Pep_LIIQLEQGDEPWR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
332 <PeptideSequence>LIIQLEQGDEPWR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
333 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
334 <Peptide id="Pep_DPAPEGEIEMLDHAVK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
335 <PeptideSequence>DPAPEGEIEMLDHAVK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
336 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
337 <Peptide id="Pep_EVMEHR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
338 <PeptideSequence>EVMEHR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
339 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
340 <Peptide id="Pep_YNKCVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
341 <PeptideSequence>YNKCVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
342 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
343 <Peptide id="Pep_GFGRGCER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
344 <PeptideSequence>GFGRGCER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
345 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
346 <Peptide id="Pep_QLAQKYNCDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
347 <PeptideSequence>QLAQKYNCDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
348 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
349 <Peptide id="Pep_DLGEEHF">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
350 <PeptideSequence>DLGEEHF</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
351 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
352 <Peptide id="Pep_DLPFLSNEYK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
353 <PeptideSequence>DLPFLSNEYK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
354 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
355 <Peptide id="Pep_DAHQKELVDQRYDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
356 <PeptideSequence>DAHQKELVDQRYDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
357 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
358 <Peptide id="Pep_QLQEELAEHQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
359 <PeptideSequence>QLQEELAEHQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
360 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
361 <Peptide id="Pep_DAENTVRGR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
362 <PeptideSequence>DAENTVRGR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
363 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
364 <Peptide id="Pep_LNKDEVVTVDEAK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
365 <PeptideSequence>LNKDEVVTVDEAK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
366 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
367 <Peptide id="Pep_LSETEMR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
368 <PeptideSequence>LSETEMR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
369 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
370 <Peptide id="Pep_DELVCEDNK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
371 <PeptideSequence>DELVCEDNK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
372 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
373 <Peptide id="Pep_CIMKDCNYKQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
374 <PeptideSequence>CIMKDCNYKQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
375 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
376 <Peptide id="Pep_ALDARDDACELLDGHCCEKHVK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
377 <PeptideSequence>ALDARDDACELLDGHCCEKHVK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
378 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
379 <Peptide id="Pep_FGYEEQSLGFSQK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
380 <PeptideSequence>FGYEEQSLGFSQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
381 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
382 <Peptide id="Pep_AQQCVCCVWVK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
383 <PeptideSequence>AQQCVCCVWVK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
384 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
385 <Peptide id="Pep_FFNPDDE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
386 <PeptideSequence>FFNPDDE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
387 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
388 <Peptide id="Pep_HAAEEEIY">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
389 <PeptideSequence>HAAEEEIY</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
390 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
391 <Peptide id="Pep_MPPLIPAEVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
392 <PeptideSequence>MPPLIPAEVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
393 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
394 <Peptide id="Pep_ESRELWNEF">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
395 <PeptideSequence>ESRELWNEF</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
396 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
397 <Peptide id="Pep_YYKVDE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
398 <PeptideSequence>YYKVDE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
399 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
400 <Peptide id="Pep_MMSASSYNE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
401 <PeptideSequence>MMSASSYNE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
402 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
403 <Peptide id="Pep_LMHDPSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
404 <PeptideSequence>LMHDPSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
405 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
406 <Peptide id="Pep_YDGLVEQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
407 <PeptideSequence>YDGLVEQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
408 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
409 <Peptide id="Pep_RCYPER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
410 <PeptideSequence>RCYPER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
411 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
412 <Peptide id="Pep_ARGCSEELS">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
413 <PeptideSequence>ARGCSEELS</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
414 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
415 <Peptide id="Pep_AMFEELSSLK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
416 <PeptideSequence>AMFEELSSLK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
417 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
418 <Peptide id="Pep_LIRRQRLRPR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
419 <PeptideSequence>LIRRQRLRPR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
420 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
421 <Peptide id="Pep_CDDQNKR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
422 <PeptideSequence>CDDQNKR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
423 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
424 <Peptide id="Pep_EACFAVEGP">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
425 <PeptideSequence>EACFAVEGP</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
426 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
427 <Peptide id="Pep_SKEVSNLEFSDR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
428 <PeptideSequence>SKEVSNLEFSDR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
429 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
430 <Peptide id="Pep_EKTGNTSSDQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
431 <PeptideSequence>EKTGNTSSDQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
432 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
433 <Peptide id="Pep_WGLDMERAGGQK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
434 <PeptideSequence>WGLDMERAGGQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
435 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
436 <Peptide id="Pep_EGQMVEEKYQK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
437 <PeptideSequence>EGQMVEEKYQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
438 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
439 <Peptide id="Pep_NTPDVMMSDTEK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
440 <PeptideSequence>NTPDVMMSDTEK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
441 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
442 <Peptide id="Pep_KECGAHSEDAVCTK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
443 <PeptideSequence>KECGAHSEDAVCTK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
444 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
445 <Peptide id="Pep_PDIGDPNWISGDSE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
446 <PeptideSequence>PDIGDPNWISGDSE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
447 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
448 <Peptide id="Pep_ELNPEEGQMVEEKYQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
449 <PeptideSequence>ELNPEEGQMVEEKYQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
450 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
451 <Peptide id="Pep_NQDALTFFNSNQVS">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
452 <PeptideSequence>NQDALTFFNSNQVS</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
453 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
454 <Peptide id="Pep_DERDAAAESYHR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
455 <PeptideSequence>DERDAAAESYHR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
456 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
457 <Peptide id="Pep_NCNGSAACGLGYDFSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
458 <PeptideSequence>NCNGSAACGLGYDFSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
459 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
460 <Peptide id="Pep_QSFGLSQEEYGFDGA">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
461 <PeptideSequence>QSFGLSQEEYGFDGA</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
462 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
463 <Peptide id="Pep_THKMYEAD">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
464 <PeptideSequence>THKMYEAD</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
465 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
466 <Peptide id="Pep_AEDEPEWPQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
467 <PeptideSequence>AEDEPEWPQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
468 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
469 <Peptide id="Pep_TEGPTYETER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
470 <PeptideSequence>TEGPTYETER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
471 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
472 <Peptide id="Pep_ASINPNNDSWDYALEE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
473 <PeptideSequence>ASINPNNDSWDYALEE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
474 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
475 <Peptide id="Pep_KQEESAEAGAPG">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
476 <PeptideSequence>KQEESAEAGAPG</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
477 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
478 <Peptide id="Pep_PFVCLECGR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
479 <PeptideSequence>PFVCLECGR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
480 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
481 <Peptide id="Pep_ENLEQAFE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
482 <PeptideSequence>ENLEQAFE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
483 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
484 <Peptide id="Pep_WDFDEES">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
485 <PeptideSequence>WDFDEES</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
486 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
487 <Peptide id="Pep_HYCGKCCL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
488 <PeptideSequence>HYCGKCCL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
489 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
490 <Peptide id="Pep_PPGAQGAEGGGSAEG">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
491 <PeptideSequence>PPGAQGAEGGGSAEG</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
492 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
493 <Peptide id="Pep_NQQPSLDQAHES">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
494 <PeptideSequence>NQQPSLDQAHES</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
495 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
496 <Peptide id="Pep_EGDYVSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
497 <PeptideSequence>EGDYVSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
498 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
499 <Peptide id="Pep_EEDASSCQEQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
500 <PeptideSequence>EEDASSCQEQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
501 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
502 <Peptide id="Pep_DENYYQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
503 <PeptideSequence>DENYYQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
504 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
505 <Peptide id="Pep_ESEGKGCSMEAPQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
506 <PeptideSequence>ESEGKGCSMEAPQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
507 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
508 <Peptide id="Pep_GEVAFCAEKDDAACCK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
509 <PeptideSequence>GEVAFCAEKDDAACCK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
510 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
511 <Peptide id="Pep_MCNFHYQG">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
512 <PeptideSequence>MCNFHYQG</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
513 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
514 <Peptide id="Pep_HGRDWF">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
515 <PeptideSequence>HGRDWF</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
516 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
517 <Peptide id="Pep_EDLVPWIEDCK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
518 <PeptideSequence>EDLVPWIEDCK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
519 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
520 <Peptide id="Pep_MGHDRCR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
521 <PeptideSequence>MGHDRCR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
522 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
523 <Peptide id="Pep_EEEKEEEE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
524 <PeptideSequence>EEEKEEEE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
525 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
526 <Peptide id="Pep_TGNTSSDQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
527 <PeptideSequence>TGNTSSDQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
528 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
529 <Peptide id="Pep_YNCDKMIC">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
530 <PeptideSequence>YNCDKMIC</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
531 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
532 <Peptide id="Pep_CGDCKFNVC">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
533 <PeptideSequence>CGDCKFNVC</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
534 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
535 <Peptide id="Pep_PRALAVAVLCTLILL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
536 <PeptideSequence>PRALAVAVLCTLILL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
537 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
538 <Peptide id="Pep_CTNFSSCWSDGKM">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
539 <PeptideSequence>CTNFSSCWSDGKM</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
540 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
541 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_ISELFDKLDSMSVDK" start="607" end="621" pre="R" post="I" isDecoy="true" id="PepEv_84238_ISELFDKLDSMSVDK_607"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
542 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_ISELFDKLDSMSVDK" start="603" end="617" pre="R" post="I" isDecoy="true" id="PepEv_85050_ISELFDKLDSMSVDK_603"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
543 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_ISELFDKLDSMSVDK" start="558" end="572" pre="R" post="I" isDecoy="true" id="PepEv_85817_ISELFDKLDSMSVDK_558"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
544 <PeptideEvidence dBSequence_ref="DBSeq93486" peptide_ref="Pep_ISELFDKLDSMSVDK" start="418" end="432" pre="R" post="I" isDecoy="true" id="PepEv_93903_ISELFDKLDSMSVDK_418"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
545 <PeptideEvidence dBSequence_ref="DBSeq31093" peptide_ref="Pep_PKNDPKLKTQGK" start="318" end="329" pre="F" post="C" isDecoy="false" id="PepEv_31410_PKNDPKLKTQGK_318"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
546 <PeptideEvidence dBSequence_ref="DBSeq31862" peptide_ref="Pep_PKNDPKLKTQGK" start="262" end="273" pre="F" post="C" isDecoy="false" id="PepEv_32123_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
547 <PeptideEvidence dBSequence_ref="DBSeq32575" peptide_ref="Pep_PKNDPKLKTQGK" start="235" end="246" pre="F" post="C" isDecoy="false" id="PepEv_32809_PKNDPKLKTQGK_235"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
548 <PeptideEvidence dBSequence_ref="DBSeq47665" peptide_ref="Pep_PKNDPKLKTQGK" start="262" end="273" pre="F" post="C" isDecoy="false" id="PepEv_47926_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
549 <PeptideEvidence dBSequence_ref="DBSeq46845" peptide_ref="Pep_EPISVSSQQMLK" start="213" end="224" pre="K" post="F" isDecoy="false" id="PepEv_47057_EPISVSSQQMLK_213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
550 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_VWGFKVAGAQDEGK" start="920" end="933" pre="K" post="N" isDecoy="true" id="PepEv_105272_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
551 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_VWGFKVAGAQDEGK" start="952" end="965" pre="K" post="N" isDecoy="true" id="PepEv_108178_VWGFKVAGAQDEGK_952"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
552 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_VWGFKVAGAQDEGK" start="920" end="933" pre="K" post="N" isDecoy="true" id="PepEv_109278_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
553 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_VWGFKVAGAQDEGK" start="920" end="933" pre="K" post="N" isDecoy="true" id="PepEv_110378_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
554 <PeptideEvidence dBSequence_ref="DBSeq47106" peptide_ref="Pep_PTAEFQDR" start="489" end="496" pre="V" post="I" isDecoy="false" id="PepEv_47594_PTAEFQDR_489"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
555 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_TVMENFVAFVDK" start="569" end="580" pre="K" post="C" isDecoy="false" id="PepEv_44505_TVMENFVAFVDK_569"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
556 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ESRCSRESRCSR" start="7512" end="7523" pre="R" post="E" isDecoy="true" id="PepEv_72991_ESRCSRESRCSR_7512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
557 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_ESRCSRESRCSR" start="5400" end="5411" pre="R" post="E" isDecoy="true" id="PepEv_78490_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
558 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_ESRCSRESRCSR" start="5400" end="5411" pre="R" post="E" isDecoy="true" id="PepEv_99888_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
559 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ACCEELTAEYEKALR" start="223" end="237" pre="K" post="L" isDecoy="true" id="PepEv_100134_ACCEELTAEYEKALR_223"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
560 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_EVEDEGFLR" start="1995" end="2003" pre="V" post="A" isDecoy="true" id="PepEv_67474_EVEDEGFLR_1995"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
561 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_EVEDEGFLR" start="1925" end="1933" pre="V" post="A" isDecoy="true" id="PepEv_75015_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
562 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_EVEDEGFLR" start="1925" end="1933" pre="V" post="A" isDecoy="true" id="PepEv_96413_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
563 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_MHQIYVQCAKL" start="39" end="49" pre="R" post="S" isDecoy="true" id="PepEv_60613_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
564 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_MHQIYVQCAKL" start="39" end="49" pre="R" post="S" isDecoy="true" id="PepEv_61866_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
565 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_MHQIYVQCAKL" start="39" end="49" pre="R" post="S" isDecoy="true" id="PepEv_89886_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
566 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_KKYMRWMNHKKSR" start="7189" end="7201" pre="R" post="V" isDecoy="false" id="PepEv_16693_KKYMRWMNHKKSR_7189"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
567 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_KKYMRWMNHKKSR" start="5143" end="5155" pre="R" post="V" isDecoy="false" id="PepEv_22258_KKYMRWMNHKKSR_5143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
568 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_KKYMRWMNHKKSR" start="5067" end="5079" pre="R" post="V" isDecoy="false" id="PepEv_43580_KKYMRWMNHKKSR_5067"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
569 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LAEAEKEGR" start="2678" end="2686" pre="T" post="L" isDecoy="false" id="PepEv_12182_LAEAEKEGR_2678"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
570 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_AEMFEHLSEK" start="4266" end="4275" pre="Q" post="L" isDecoy="false" id="PepEv_13770_AEMFEHLSEK_4266"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
571 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_AEMFEHLSEK" start="2224" end="2233" pre="Q" post="L" isDecoy="false" id="PepEv_19339_AEMFEHLSEK_2224"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
572 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_AEMFEHLSEK" start="2148" end="2157" pre="Q" post="L" isDecoy="false" id="PepEv_40661_AEMFEHLSEK_2148"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
573 <PeptideEvidence dBSequence_ref="DBSeq92858" peptide_ref="Pep_SFNQEPQYR" start="190" end="198" pre="K" post="L" isDecoy="true" id="PepEv_93047_SFNQEPQYR_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
574 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_63753_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
575 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_64608_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
576 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_91875_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
577 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_92730_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
578 <PeptideEvidence dBSequence_ref="DBSeq8761" peptide_ref="Pep_PNTEPTHHFI" start="460" end="469" pre="R" post="H" isDecoy="false" id="PepEv_9220_PNTEPTHHFI_460"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
579 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_EGVAICKAGFR" start="227" end="237" pre="S" post="H" isDecoy="true" id="PepEv_103307_EGVAICKAGFR_227"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
580 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLEDILVLAK" start="5490" end="5499" pre="K" post="Q" isDecoy="false" id="PepEv_14994_QLEDILVLAK_5490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
581 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_QLEDILVLAK" start="3448" end="3457" pre="K" post="Q" isDecoy="false" id="PepEv_20563_QLEDILVLAK_3448"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
582 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_QLEDILVLAK" start="3372" end="3381" pre="K" post="Q" isDecoy="false" id="PepEv_41885_QLEDILVLAK_3372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
583 <PeptideEvidence dBSequence_ref="DBSeq4600" peptide_ref="Pep_AAQGALQPSL" start="1030" end="1039" pre="K" post="Y" isDecoy="false" id="PepEv_5629_AAQGALQPSL_1030"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
584 <PeptideEvidence dBSequence_ref="DBSeq5853" peptide_ref="Pep_AAQGALQPSL" start="975" end="984" pre="K" post="Y" isDecoy="false" id="PepEv_6827_AAQGALQPSL_975"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
585 <PeptideEvidence dBSequence_ref="DBSeq33873" peptide_ref="Pep_AAQGALQPSL" start="1077" end="1086" pre="K" post="Y" isDecoy="false" id="PepEv_34949_AAQGALQPSL_1077"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
586 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_VNPVTALTLLEKMK" start="759" end="772" pre="R" post="D" isDecoy="false" id="PepEv_29231_VNPVTALTLLEKMK_759"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
587 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_FEIWVELLKYLEEIRGK" start="7148" end="7164" pre="G" post="E" isDecoy="true" id="PepEv_72627_FEIWVELLKYLEEIRGK_7148"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
588 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_FEIWVELLKYLEEIRGK" start="5036" end="5052" pre="G" post="E" isDecoy="true" id="PepEv_78126_FEIWVELLKYLEEIRGK_5036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
589 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_FEIWVELLKYLEEIRGK" start="5036" end="5052" pre="G" post="E" isDecoy="true" id="PepEv_99524_FEIWVELLKYLEEIRGK_5036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
590 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_27908_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
591 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_28724_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
592 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_29536_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
593 <PeptideEvidence dBSequence_ref="DBSeq37511" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_37762_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
594 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_DTNIQICR" start="194" end="201" pre="S" post="T" isDecoy="true" id="PepEv_60768_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
595 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_DTNIQICR" start="194" end="201" pre="S" post="T" isDecoy="true" id="PepEv_62021_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
596 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_DTNIQICR" start="194" end="201" pre="S" post="T" isDecoy="true" id="PepEv_90041_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
597 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLEGRLQDLR" start="3542" end="3551" pre="E" post="A" isDecoy="false" id="PepEv_13046_QLEGRLQDLR_3542"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
598 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_RAFQECER" start="105" end="112" pre="S" post="V" isDecoy="true" id="PepEv_83736_RAFQECER_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
599 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_RAFQECER" start="101" end="108" pre="S" post="V" isDecoy="true" id="PepEv_84548_RAFQECER_101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
600 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_RAFQECER" start="56" end="63" pre="S" post="V" isDecoy="true" id="PepEv_85315_RAFQECER_56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
601 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LECTNLYR" start="597" end="604" pre="R" post="K" isDecoy="false" id="PepEv_10101_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
602 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LECTNLYR" start="597" end="604" pre="R" post="K" isDecoy="false" id="PepEv_17712_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
603 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LECTNLYR" start="521" end="528" pre="R" post="K" isDecoy="false" id="PepEv_39034_LECTNLYR_521"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
604 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LMLLSRDDSGSGSK" start="6550" end="6563" pre="R" post="T" isDecoy="false" id="PepEv_16054_LMLLSRDDSGSGSK_6550"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
605 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LMLLSRDDSGSGSK" start="4508" end="4521" pre="R" post="T" isDecoy="false" id="PepEv_21623_LMLLSRDDSGSGSK_4508"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
606 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LMLLSRDDSGSGSK" start="4432" end="4445" pre="R" post="T" isDecoy="false" id="PepEv_42945_LMLLSRDDSGSGSK_4432"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
607 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1020" end="1033" pre="K" post="N" isDecoy="true" id="PepEv_105372_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
608 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1052" end="1065" pre="K" post="N" isDecoy="true" id="PepEv_108278_ATEGTQLFNDYCEQ_1052"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
609 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1020" end="1033" pre="K" post="N" isDecoy="true" id="PepEv_109378_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
610 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1020" end="1033" pre="K" post="N" isDecoy="true" id="PepEv_110478_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
611 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_IQNGALNCEEKLTLAK" start="512" end="527" pre="K" post="N" isDecoy="false" id="PepEv_10016_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
612 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_IQNGALNCEEKLTLAK" start="512" end="527" pre="K" post="N" isDecoy="false" id="PepEv_17627_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
613 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_IQNGALNCEEKLTLAK" start="436" end="451" pre="K" post="N" isDecoy="false" id="PepEv_38949_IQNGALNCEEKLTLAK_436"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
614 <PeptideEvidence dBSequence_ref="DBSeq248" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_801_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
615 <PeptideEvidence dBSequence_ref="DBSeq865" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_1418_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
616 <PeptideEvidence dBSequence_ref="DBSeq1482" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_2035_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
617 <PeptideEvidence dBSequence_ref="DBSeq2099" peptide_ref="Pep_CVCDECGRGFGFK" start="553" end="565" pre="P" post="S" isDecoy="false" id="PepEv_2651_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
618 <PeptideEvidence dBSequence_ref="DBSeq2715" peptide_ref="Pep_CVCDECGRGFGFK" start="534" end="546" pre="P" post="S" isDecoy="false" id="PepEv_3248_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
619 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_CVCDECGRGFGFK" start="526" end="538" pre="P" post="S" isDecoy="false" id="PepEv_3837_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
620 <PeptideEvidence dBSequence_ref="DBSeq24004" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_24557_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
621 <PeptideEvidence dBSequence_ref="DBSeq24621" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_25174_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
622 <PeptideEvidence dBSequence_ref="DBSeq25238" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_25791_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
623 <PeptideEvidence dBSequence_ref="DBSeq25855" peptide_ref="Pep_CVCDECGRGFGFK" start="553" end="565" pre="P" post="S" isDecoy="false" id="PepEv_26407_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
624 <PeptideEvidence dBSequence_ref="DBSeq26471" peptide_ref="Pep_CVCDECGRGFGFK" start="534" end="546" pre="P" post="S" isDecoy="false" id="PepEv_27004_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
625 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_CVCDECGRGFGFK" start="526" end="538" pre="P" post="S" isDecoy="false" id="PepEv_27593_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
626 <PeptideEvidence dBSequence_ref="DBSeq64736" peptide_ref="Pep_RMMESRQR" start="33" end="40" pre="K" post="S" isDecoy="true" id="PepEv_64768_RMMESRQR_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
627 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_RSDVEQLDQEIK" start="4778" end="4789" pre="I" post="E" isDecoy="false" id="PepEv_14282_RSDVEQLDQEIK_4778"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
628 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_RSDVEQLDQEIK" start="2736" end="2747" pre="I" post="E" isDecoy="false" id="PepEv_19851_RSDVEQLDQEIK_2736"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
629 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_RSDVEQLDQEIK" start="2660" end="2671" pre="I" post="E" isDecoy="false" id="PepEv_41173_RSDVEQLDQEIK_2660"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
630 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_WQEYQSRVD" start="392" end="400" pre="R" post="S" isDecoy="false" id="PepEv_9896_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
631 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_WQEYQSRVD" start="392" end="400" pre="R" post="S" isDecoy="false" id="PepEv_17507_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
632 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_WQEYQSRVD" start="316" end="324" pre="R" post="S" isDecoy="false" id="PepEv_38829_WQEYQSRVD_316"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
633 <PeptideEvidence dBSequence_ref="DBSeq4600" peptide_ref="Pep_RKFIIHRGKRKAAQ" start="1019" end="1032" pre="K" post="G" isDecoy="false" id="PepEv_5618_RKFIIHRGKRKAAQ_1019"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
634 <PeptideEvidence dBSequence_ref="DBSeq5853" peptide_ref="Pep_RKFIIHRGKRKAAQ" start="964" end="977" pre="K" post="G" isDecoy="false" id="PepEv_6816_RKFIIHRGKRKAAQ_964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
635 <PeptideEvidence dBSequence_ref="DBSeq33873" peptide_ref="Pep_RKFIIHRGKRKAAQ" start="1066" end="1079" pre="K" post="G" isDecoy="false" id="PepEv_34938_RKFIIHRGKRKAAQ_1066"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
636 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_VKDIVNLTDVNP" start="5424" end="5435" pre="K" post="N" isDecoy="true" id="PepEv_70903_VKDIVNLTDVNP_5424"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
637 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_KELVDQRYDK" start="1968" end="1977" pre="Q" post="V" isDecoy="true" id="PepEv_67447_KELVDQRYDK_1968"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
638 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_KELVDQRYDK" start="1898" end="1907" pre="Q" post="V" isDecoy="true" id="PepEv_74988_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
639 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_KELVDQRYDK" start="1898" end="1907" pre="Q" post="V" isDecoy="true" id="PepEv_96386_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
640 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_QNIDRCYPER" start="11" end="20" pre="L" post="Q" isDecoy="true" id="PepEv_105840_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
641 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_QNIDRCYPER" start="11" end="20" pre="L" post="Q" isDecoy="true" id="PepEv_106560_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
642 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_QNIDRCYPER" start="11" end="20" pre="L" post="Q" isDecoy="true" id="PepEv_110907_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
643 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLAQQTEQKGCR" start="1613" end="1624" pre="S" post="A" isDecoy="false" id="PepEv_11117_QLAQQTEQKGCR_1613"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
644 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_IFELEEH" start="1395" end="1401" pre="R" post="L" isDecoy="true" id="PepEv_66874_IFELEEH_1395"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
645 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_IFELEEH" start="1325" end="1331" pre="R" post="L" isDecoy="true" id="PepEv_74415_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
646 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_IFELEEH" start="1325" end="1331" pre="R" post="L" isDecoy="true" id="PepEv_95813_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
647 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="990" end="1005" pre="K" post="D" isDecoy="false" id="PepEv_49367_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
648 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="1022" end="1037" pre="K" post="D" isDecoy="false" id="PepEv_52273_VFEEMIEPYCLHESCK_1022"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
649 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="990" end="1005" pre="K" post="D" isDecoy="false" id="PepEv_53373_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
650 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="990" end="1005" pre="K" post="D" isDecoy="false" id="PepEv_54473_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
651 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_GLRFDWSLR" start="528" end="536" pre="P" post="E" isDecoy="true" id="PepEv_106357_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
652 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_GLRFDWSLR" start="528" end="536" pre="P" post="E" isDecoy="true" id="PepEv_107077_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
653 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_GLRFDWSLR" start="528" end="536" pre="P" post="E" isDecoy="true" id="PepEv_111424_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
654 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="259" end="280" pre="Q" post="T" isDecoy="true" id="PepEv_83890_VLETLGINKRKIVNQLSNSLTR_259"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
655 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="255" end="276" pre="Q" post="T" isDecoy="true" id="PepEv_84702_VLETLGINKRKIVNQLSNSLTR_255"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
656 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="210" end="231" pre="Q" post="T" isDecoy="true" id="PepEv_85469_VLETLGINKRKIVNQLSNSLTR_210"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
657 <PeptideEvidence dBSequence_ref="DBSeq93486" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="70" end="91" pre="Q" post="T" isDecoy="true" id="PepEv_93555_VLETLGINKRKIVNQLSNSLTR_70"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
658 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DPDNSIELE" start="874" end="882" pre="K" post="S" isDecoy="true" id="PepEv_66353_DPDNSIELE_874"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
659 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DPDNSIELE" start="804" end="812" pre="K" post="S" isDecoy="true" id="PepEv_73894_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
660 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DPDNSIELE" start="804" end="812" pre="K" post="S" isDecoy="true" id="PepEv_95292_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
661 <PeptideEvidence dBSequence_ref="DBSeq248" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_324_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
662 <PeptideEvidence dBSequence_ref="DBSeq865" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_941_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
663 <PeptideEvidence dBSequence_ref="DBSeq1482" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_1558_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
664 <PeptideEvidence dBSequence_ref="DBSeq2099" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_2175_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
665 <PeptideEvidence dBSequence_ref="DBSeq2715" peptide_ref="Pep_LIIQLEQGDEPWR" start="57" end="69" pre="K" post="E" isDecoy="false" id="PepEv_2771_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
666 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_LIIQLEQGDEPWR" start="49" end="61" pre="K" post="E" isDecoy="false" id="PepEv_3360_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
667 <PeptideEvidence dBSequence_ref="DBSeq24004" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_24080_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
668 <PeptideEvidence dBSequence_ref="DBSeq24621" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_24697_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
669 <PeptideEvidence dBSequence_ref="DBSeq25238" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_25314_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
670 <PeptideEvidence dBSequence_ref="DBSeq25855" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_25931_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
671 <PeptideEvidence dBSequence_ref="DBSeq26471" peptide_ref="Pep_LIIQLEQGDEPWR" start="57" end="69" pre="K" post="E" isDecoy="false" id="PepEv_26527_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
672 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_LIIQLEQGDEPWR" start="49" end="61" pre="K" post="E" isDecoy="false" id="PepEv_27116_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
673 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DPAPEGEIEMLDHAVK" start="3490" end="3505" pre="R" post="Q" isDecoy="true" id="PepEv_68969_DPAPEGEIEMLDHAVK_3490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
674 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DPAPEGEIEMLDHAVK" start="3420" end="3435" pre="R" post="Q" isDecoy="true" id="PepEv_76510_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
675 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DPAPEGEIEMLDHAVK" start="3420" end="3435" pre="R" post="Q" isDecoy="true" id="PepEv_97908_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
676 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EVMEHR" start="5763" end="5768" pre="K" post="L" isDecoy="false" id="PepEv_15267_EVMEHR_5763"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
677 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EVMEHR" start="3721" end="3726" pre="K" post="L" isDecoy="false" id="PepEv_20836_EVMEHR_3721"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
678 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EVMEHR" start="3645" end="3650" pre="K" post="L" isDecoy="false" id="PepEv_42158_EVMEHR_3645"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
679 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_YNKCVDK" start="266" end="272" pre="Q" post="D" isDecoy="true" id="PepEv_100177_YNKCVDK_266"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
680 <PeptideEvidence dBSequence_ref="DBSeq56223" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_56555_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
681 <PeptideEvidence dBSequence_ref="DBSeq56840" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_57172_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
682 <PeptideEvidence dBSequence_ref="DBSeq57457" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_57789_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
683 <PeptideEvidence dBSequence_ref="DBSeq58074" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_58406_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
684 <PeptideEvidence dBSequence_ref="DBSeq58690" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_59022_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
685 <PeptideEvidence dBSequence_ref="DBSeq59287" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_59619_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
686 <PeptideEvidence dBSequence_ref="DBSeq79979" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_80311_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
687 <PeptideEvidence dBSequence_ref="DBSeq80596" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_80928_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
688 <PeptideEvidence dBSequence_ref="DBSeq81213" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_81545_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
689 <PeptideEvidence dBSequence_ref="DBSeq81830" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_82162_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
690 <PeptideEvidence dBSequence_ref="DBSeq82446" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_82778_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
691 <PeptideEvidence dBSequence_ref="DBSeq83043" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_83375_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
692 <PeptideEvidence dBSequence_ref="DBSeq23875" peptide_ref="Pep_QLAQKYNCDK" start="84" end="93" pre="R" post="M" isDecoy="false" id="PepEv_23958_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
693 <PeptideEvidence dBSequence_ref="DBSeq46340" peptide_ref="Pep_QLAQKYNCDK" start="84" end="93" pre="R" post="M" isDecoy="false" id="PepEv_46423_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
694 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_DLGEEHF" start="37" end="43" pre="K" post="K" isDecoy="false" id="PepEv_43973_DLGEEHF_37"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
695 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_DLPFLSNEYK" start="3221" end="3230" pre="K" post="E" isDecoy="false" id="PepEv_12725_DLPFLSNEYK_3221"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
696 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DAHQKELVDQRYDK" start="1964" end="1977" pre="H" post="V" isDecoy="true" id="PepEv_67443_DAHQKELVDQRYDK_1964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
697 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DAHQKELVDQRYDK" start="1894" end="1907" pre="H" post="V" isDecoy="true" id="PepEv_74984_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
698 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DAHQKELVDQRYDK" start="1894" end="1907" pre="H" post="V" isDecoy="true" id="PepEv_96382_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
699 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLQEELAEHQ" start="4089" end="4098" pre="K" post="V" isDecoy="false" id="PepEv_13593_QLQEELAEHQ_4089"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
700 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_QLQEELAEHQ" start="2047" end="2056" pre="K" post="V" isDecoy="false" id="PepEv_19162_QLQEELAEHQ_2047"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
701 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_QLQEELAEHQ" start="1971" end="1980" pre="K" post="V" isDecoy="false" id="PepEv_40484_QLQEELAEHQ_1971"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
702 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_DAENTVRGR" start="2533" end="2541" pre="R" post="L" isDecoy="false" id="PepEv_12037_DAENTVRGR_2533"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
703 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_LNKDEVVTVDEAK" start="5375" end="5387" pre="L" post="E" isDecoy="true" id="PepEv_70854_LNKDEVVTVDEAK_5375"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
704 <PeptideEvidence dBSequence_ref="DBSeq8761" peptide_ref="Pep_LSETEMR" start="453" end="459" pre="Q" post="P" isDecoy="false" id="PepEv_9213_LSETEMR_453"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
705 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DELVCEDNK" start="6637" end="6645" pre="N" post="C" isDecoy="true" id="PepEv_72116_DELVCEDNK_6637"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
706 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DELVCEDNK" start="4527" end="4535" pre="N" post="C" isDecoy="true" id="PepEv_77617_DELVCEDNK_4527"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
707 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DELVCEDNK" start="4527" end="4535" pre="N" post="C" isDecoy="true" id="PepEv_99015_DELVCEDNK_4527"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
708 <PeptideEvidence dBSequence_ref="DBSeq79850" peptide_ref="Pep_CIMKDCNYKQ" start="33" end="42" pre="R" post="A" isDecoy="true" id="PepEv_79882_CIMKDCNYKQ_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
709 <PeptideEvidence dBSequence_ref="DBSeq102315" peptide_ref="Pep_CIMKDCNYKQ" start="33" end="42" pre="R" post="A" isDecoy="true" id="PepEv_102347_CIMKDCNYKQ_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
710 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ALDARDDACELLDGHCCEKHVK" start="324" end="345" pre="K" post="T" isDecoy="true" id="PepEv_100235_ALDARDDACELLDGHCCEKHVK_324"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
711 <PeptideEvidence dBSequence_ref="DBSeq94113" peptide_ref="Pep_FGYEEQSLGFSQK" start="212" end="224" pre="D" post="L" isDecoy="true" id="PepEv_94324_FGYEEQSLGFSQK_212"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
712 <PeptideEvidence dBSequence_ref="DBSeq105453" peptide_ref="Pep_FGYEEQSLGFSQK" start="213" end="225" pre="D" post="L" isDecoy="true" id="PepEv_105665_FGYEEQSLGFSQK_213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
713 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_63770_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
714 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_64625_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
715 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_91892_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
716 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_92747_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
717 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_FFNPDDE" start="492" end="498" pre="K" post="R" isDecoy="true" id="PepEv_103572_FFNPDDE_492"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
718 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_HAAEEEIY" start="604" end="611" pre="R" post="T" isDecoy="false" id="PepEv_28260_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
719 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_HAAEEEIY" start="604" end="611" pre="R" post="T" isDecoy="false" id="PepEv_29076_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
720 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_HAAEEEIY" start="604" end="611" pre="R" post="T" isDecoy="false" id="PepEv_29888_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
721 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_MPPLIPAEVDK" start="6068" end="6078" pre="R" post="I" isDecoy="false" id="PepEv_15572_MPPLIPAEVDK_6068"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
722 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_MPPLIPAEVDK" start="4026" end="4036" pre="R" post="I" isDecoy="false" id="PepEv_21141_MPPLIPAEVDK_4026"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
723 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_MPPLIPAEVDK" start="3950" end="3960" pre="R" post="I" isDecoy="false" id="PepEv_42463_MPPLIPAEVDK_3950"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
724 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ESRELWNEF" start="3666" end="3674" pre="K" post="E" isDecoy="true" id="PepEv_69145_ESRELWNEF_3666"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
725 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_ESRELWNEF" start="3596" end="3604" pre="K" post="E" isDecoy="true" id="PepEv_76686_ESRELWNEF_3596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
726 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_ESRELWNEF" start="3596" end="3604" pre="K" post="E" isDecoy="true" id="PepEv_98084_ESRELWNEF_3596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
727 <PeptideEvidence dBSequence_ref="DBSeq30052" peptide_ref="Pep_YYKVDE" start="105" end="110" pre="K" post="N" isDecoy="false" id="PepEv_30156_YYKVDE_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
728 <PeptideEvidence dBSequence_ref="DBSeq44851" peptide_ref="Pep_YYKVDE" start="105" end="110" pre="K" post="N" isDecoy="false" id="PepEv_44955_YYKVDE_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
729 <PeptideEvidence dBSequence_ref="DBSeq8761" peptide_ref="Pep_MMSASSYNE" start="472" end="480" pre="R" post="D" isDecoy="false" id="PepEv_9232_MMSASSYNE_472"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
730 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_LMHDPSR" start="6666" end="6672" pre="K" post="P" isDecoy="true" id="PepEv_72145_LMHDPSR_6666"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
731 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_LMHDPSR" start="4556" end="4562" pre="K" post="P" isDecoy="true" id="PepEv_77646_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
732 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_LMHDPSR" start="4556" end="4562" pre="K" post="P" isDecoy="true" id="PepEv_99044_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
733 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_YDGLVEQ" start="6253" end="6259" pre="R" post="I" isDecoy="true" id="PepEv_71732_YDGLVEQ_6253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
734 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_YDGLVEQ" start="4143" end="4149" pre="R" post="I" isDecoy="true" id="PepEv_77233_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
735 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_YDGLVEQ" start="4143" end="4149" pre="R" post="I" isDecoy="true" id="PepEv_98631_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
736 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_RCYPER" start="15" end="20" pre="D" post="Q" isDecoy="true" id="PepEv_105844_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
737 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_RCYPER" start="15" end="20" pre="D" post="Q" isDecoy="true" id="PepEv_106564_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
738 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_RCYPER" start="15" end="20" pre="D" post="Q" isDecoy="true" id="PepEv_110911_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
739 <PeptideEvidence dBSequence_ref="DBSeq7051" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_7575_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
740 <PeptideEvidence dBSequence_ref="DBSeq7906" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_8430_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
741 <PeptideEvidence dBSequence_ref="DBSeq35173" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_35697_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
742 <PeptideEvidence dBSequence_ref="DBSeq36028" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_36552_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
743 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_AMFEELSSLK" start="945" end="954" pre="A" post="G" isDecoy="true" id="PepEv_61519_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
744 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_AMFEELSSLK" start="944" end="953" pre="A" post="G" isDecoy="true" id="PepEv_62771_AMFEELSSLK_944"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
745 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_AMFEELSSLK" start="945" end="954" pre="A" post="G" isDecoy="true" id="PepEv_90792_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
746 <PeptideEvidence dBSequence_ref="DBSeq36883" peptide_ref="Pep_LIRRQRLRPR" start="13" end="22" pre="K" post="E" isDecoy="false" id="PepEv_36895_LIRRQRLRPR_13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
747 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_CDDQNKR" start="2931" end="2937" pre="E" post="S" isDecoy="false" id="PepEv_12435_CDDQNKR_2931"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
748 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_EACFAVEGP" start="588" end="596" pre="K" post="K" isDecoy="false" id="PepEv_44524_EACFAVEGP_588"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
749 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_SKEVSNLEFSDR" start="3254" end="3265" pre="G" post="K" isDecoy="false" id="PepEv_12758_SKEVSNLEFSDR_3254"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
750 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_63045_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
751 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_63900_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
752 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_91167_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
753 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_92022_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
754 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_WGLDMERAGGQK" start="408" end="419" pre="K" post="T" isDecoy="true" id="PepEv_106237_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
755 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_WGLDMERAGGQK" start="408" end="419" pre="K" post="T" isDecoy="true" id="PepEv_106957_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
756 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_WGLDMERAGGQK" start="408" end="419" pre="K" post="T" isDecoy="true" id="PepEv_111304_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
757 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EGQMVEEKYQK" start="6006" end="6016" pre="E" post="A" isDecoy="false" id="PepEv_15510_EGQMVEEKYQK_6006"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
758 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EGQMVEEKYQK" start="3964" end="3974" pre="E" post="A" isDecoy="false" id="PepEv_21079_EGQMVEEKYQK_3964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
759 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EGQMVEEKYQK" start="3888" end="3898" pre="E" post="A" isDecoy="false" id="PepEv_42401_EGQMVEEKYQK_3888"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
760 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_105153_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
761 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_108027_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
762 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_109159_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
763 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_110259_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
764 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_KECGAHSEDAVCTK" start="520" end="533" pre="S" post="A" isDecoy="true" id="PepEv_100431_KECGAHSEDAVCTK_520"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
765 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_PDIGDPNWISGDSE" start="214" end="227" pre="K" post="G" isDecoy="true" id="PepEv_103294_PDIGDPNWISGDSE_214"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
766 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_ELNPEEGQMVEEKYQ" start="6001" end="6015" pre="K" post="K" isDecoy="false" id="PepEv_15505_ELNPEEGQMVEEKYQ_6001"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
767 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_ELNPEEGQMVEEKYQ" start="3959" end="3973" pre="K" post="K" isDecoy="false" id="PepEv_21074_ELNPEEGQMVEEKYQ_3959"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
768 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_ELNPEEGQMVEEKYQ" start="3883" end="3897" pre="K" post="K" isDecoy="false" id="PepEv_42396_ELNPEEGQMVEEKYQ_3883"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
769 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_NQDALTFFNSNQVS" start="3135" end="3148" pre="R" post="E" isDecoy="false" id="PepEv_12639_NQDALTFFNSNQVS_3135"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
770 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_DERDAAAESYHR" start="497" end="508" pre="D" post="R" isDecoy="true" id="PepEv_103577_DERDAAAESYHR_497"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
771 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="454" end="469" pre="M" post="C" isDecoy="false" id="PepEv_48831_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
772 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="486" end="501" pre="M" post="C" isDecoy="false" id="PepEv_51737_NCNGSAACGLGYDFSR_486"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
773 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="454" end="469" pre="M" post="C" isDecoy="false" id="PepEv_52837_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
774 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="454" end="469" pre="M" post="C" isDecoy="false" id="PepEv_53937_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
775 <PeptideEvidence dBSequence_ref="DBSeq38138" peptide_ref="Pep_QSFGLSQEEYGFDGA" start="153" end="167" pre="K" post="P" isDecoy="false" id="PepEv_38290_QSFGLSQEEYGFDGA_153"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
776 <PeptideEvidence dBSequence_ref="DBSeq49478" peptide_ref="Pep_QSFGLSQEEYGFDGA" start="153" end="167" pre="K" post="P" isDecoy="false" id="PepEv_49630_QSFGLSQEEYGFDGA_153"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
777 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_THKMYEAD" start="106" end="113" pre="R" post="D" isDecoy="true" id="PepEv_60680_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
778 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_THKMYEAD" start="106" end="113" pre="R" post="D" isDecoy="true" id="PepEv_61933_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
779 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_THKMYEAD" start="106" end="113" pre="R" post="D" isDecoy="true" id="PepEv_89953_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
780 <PeptideEvidence dBSequence_ref="DBSeq7051" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_7306_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
781 <PeptideEvidence dBSequence_ref="DBSeq7906" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_8161_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
782 <PeptideEvidence dBSequence_ref="DBSeq35173" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_35428_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
783 <PeptideEvidence dBSequence_ref="DBSeq36028" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_36283_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
784 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_TEGPTYETER" start="5338" end="5347" pre="G" post="T" isDecoy="true" id="PepEv_70817_TEGPTYETER_5338"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
785 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ASINPNNDSWDYALEE" start="6818" end="6833" pre="K" post="E" isDecoy="true" id="PepEv_72297_ASINPNNDSWDYALEE_6818"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
786 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_ASINPNNDSWDYALEE" start="4706" end="4721" pre="K" post="E" isDecoy="true" id="PepEv_77796_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
787 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_ASINPNNDSWDYALEE" start="4706" end="4721" pre="K" post="E" isDecoy="true" id="PepEv_99194_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
788 <PeptideEvidence dBSequence_ref="DBSeq4600" peptide_ref="Pep_KQEESAEAGAPG" start="443" end="454" pre="R" post="G" isDecoy="false" id="PepEv_5042_KQEESAEAGAPG_443"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
789 <PeptideEvidence dBSequence_ref="DBSeq5853" peptide_ref="Pep_KQEESAEAGAPG" start="388" end="399" pre="R" post="G" isDecoy="false" id="PepEv_6240_KQEESAEAGAPG_388"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
790 <PeptideEvidence dBSequence_ref="DBSeq33873" peptide_ref="Pep_KQEESAEAGAPG" start="490" end="501" pre="R" post="G" isDecoy="false" id="PepEv_34362_KQEESAEAGAPG_490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
791 <PeptideEvidence dBSequence_ref="DBSeq248" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_632_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
792 <PeptideEvidence dBSequence_ref="DBSeq865" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_1249_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
793 <PeptideEvidence dBSequence_ref="DBSeq1482" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_1866_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
794 <PeptideEvidence dBSequence_ref="DBSeq2099" peptide_ref="Pep_PFVCLECGR" start="384" end="392" pre="R" post="G" isDecoy="false" id="PepEv_2482_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
795 <PeptideEvidence dBSequence_ref="DBSeq2715" peptide_ref="Pep_PFVCLECGR" start="365" end="373" pre="R" post="G" isDecoy="false" id="PepEv_3079_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
796 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_PFVCLECGR" start="357" end="365" pre="R" post="G" isDecoy="false" id="PepEv_3668_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
797 <PeptideEvidence dBSequence_ref="DBSeq24004" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_24388_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
798 <PeptideEvidence dBSequence_ref="DBSeq24621" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_25005_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
799 <PeptideEvidence dBSequence_ref="DBSeq25238" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_25622_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
800 <PeptideEvidence dBSequence_ref="DBSeq25855" peptide_ref="Pep_PFVCLECGR" start="384" end="392" pre="R" post="G" isDecoy="false" id="PepEv_26238_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
801 <PeptideEvidence dBSequence_ref="DBSeq26471" peptide_ref="Pep_PFVCLECGR" start="365" end="373" pre="R" post="G" isDecoy="false" id="PepEv_26835_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
802 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_PFVCLECGR" start="357" end="365" pre="R" post="G" isDecoy="false" id="PepEv_27424_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
803 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_ENLEQAFE" start="329" end="336" pre="R" post="V" isDecoy="false" id="PepEv_9833_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
804 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_ENLEQAFE" start="329" end="336" pre="R" post="V" isDecoy="false" id="PepEv_17444_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
805 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_ENLEQAFE" start="253" end="260" pre="R" post="V" isDecoy="false" id="PepEv_38766_ENLEQAFE_253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
806 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_63479_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
807 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_64334_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
808 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_91601_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
809 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_92456_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
810 <PeptideEvidence dBSequence_ref="DBSeq30052" peptide_ref="Pep_HYCGKCCL" start="139" end="146" pre="R" post="T" isDecoy="false" id="PepEv_30190_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
811 <PeptideEvidence dBSequence_ref="DBSeq44851" peptide_ref="Pep_HYCGKCCL" start="139" end="146" pre="R" post="T" isDecoy="false" id="PepEv_44989_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
812 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_PPGAQGAEGGGSAEG" start="372" end="386" pre="K" post="G" isDecoy="true" id="PepEv_106201_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
813 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_PPGAQGAEGGGSAEG" start="372" end="386" pre="K" post="G" isDecoy="true" id="PepEv_106921_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
814 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_PPGAQGAEGGGSAEG" start="372" end="386" pre="K" post="G" isDecoy="true" id="PepEv_111268_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
815 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_NQQPSLDQAHES" start="3992" end="4003" pre="R" post="I" isDecoy="true" id="PepEv_69471_NQQPSLDQAHES_3992"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
816 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_EGDYVSR" start="772" end="778" pre="E" post="L" isDecoy="true" id="PepEv_84403_EGDYVSR_772"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
817 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_EGDYVSR" start="768" end="774" pre="E" post="L" isDecoy="true" id="PepEv_85215_EGDYVSR_768"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
818 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_EGDYVSR" start="723" end="729" pre="E" post="L" isDecoy="true" id="PepEv_85982_EGDYVSR_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
819 <PeptideEvidence dBSequence_ref="DBSeq93486" peptide_ref="Pep_EGDYVSR" start="583" end="589" pre="E" post="L" isDecoy="true" id="PepEv_94068_EGDYVSR_583"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
820 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EEDASSCQEQ" start="4362" end="4371" pre="R" post="L" isDecoy="false" id="PepEv_13866_EEDASSCQEQ_4362"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
821 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EEDASSCQEQ" start="2320" end="2329" pre="R" post="L" isDecoy="false" id="PepEv_19435_EEDASSCQEQ_2320"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
822 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EEDASSCQEQ" start="2244" end="2253" pre="R" post="L" isDecoy="false" id="PepEv_40757_EEDASSCQEQ_2244"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
823 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_DENYYQ" start="572" end="577" pre="R" post="L" isDecoy="false" id="PepEv_10076_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
824 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_DENYYQ" start="572" end="577" pre="R" post="L" isDecoy="false" id="PepEv_17687_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
825 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_DENYYQ" start="496" end="501" pre="R" post="L" isDecoy="false" id="PepEv_39009_DENYYQ_496"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
826 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ESEGKGCSMEAPQ" start="4717" end="4729" pre="K" post="S" isDecoy="true" id="PepEv_70196_ESEGKGCSMEAPQ_4717"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
827 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_GEVAFCAEKDDAACCK" start="13" end="28" pre="P" post="D" isDecoy="true" id="PepEv_99924_GEVAFCAEKDDAACCK_13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
828 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_27723_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
829 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_28539_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
830 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_29351_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
831 <PeptideEvidence dBSequence_ref="DBSeq37511" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_37577_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
832 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_HGRDWF" start="206" end="211" pre="R" post="Y" isDecoy="true" id="PepEv_106035_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
833 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_HGRDWF" start="206" end="211" pre="R" post="Y" isDecoy="true" id="PepEv_106755_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
834 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_HGRDWF" start="206" end="211" pre="R" post="Y" isDecoy="true" id="PepEv_111102_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
835 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EDLVPWIEDCK" start="4961" end="4971" pre="V" post="A" isDecoy="false" id="PepEv_14465_EDLVPWIEDCK_4961"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
836 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EDLVPWIEDCK" start="2919" end="2929" pre="V" post="A" isDecoy="false" id="PepEv_20034_EDLVPWIEDCK_2919"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
837 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EDLVPWIEDCK" start="2843" end="2853" pre="V" post="A" isDecoy="false" id="PepEv_41356_EDLVPWIEDCK_2843"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
838 <PeptideEvidence dBSequence_ref="DBSeq87068" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_87217_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
839 <PeptideEvidence dBSequence_ref="DBSeq87837" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_87986_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
840 <PeptideEvidence dBSequence_ref="DBSeq88550" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_88699_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
841 <PeptideEvidence dBSequence_ref="DBSeq103640" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_103789_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
842 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_EEEKEEEE" start="315" end="322" pre="K" post="Y" isDecoy="true" id="PepEv_60889_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
843 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_EEEKEEEE" start="315" end="322" pre="K" post="Y" isDecoy="true" id="PepEv_62142_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
844 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_EEEKEEEE" start="315" end="322" pre="K" post="Y" isDecoy="true" id="PepEv_90162_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
845 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_63047_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
846 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_63902_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
847 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_91169_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
848 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_92024_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
849 <PeptideEvidence dBSequence_ref="DBSeq23875" peptide_ref="Pep_YNCDKMIC" start="89" end="96" pre="K" post="R" isDecoy="false" id="PepEv_23963_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
850 <PeptideEvidence dBSequence_ref="DBSeq46340" peptide_ref="Pep_YNCDKMIC" start="89" end="96" pre="K" post="R" isDecoy="false" id="PepEv_46428_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
851 <PeptideEvidence dBSequence_ref="DBSeq7051" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_7131_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
852 <PeptideEvidence dBSequence_ref="DBSeq7906" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_7986_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
853 <PeptideEvidence dBSequence_ref="DBSeq35173" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_35253_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
854 <PeptideEvidence dBSequence_ref="DBSeq36028" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_36108_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
855 <PeptideEvidence dBSequence_ref="DBSeq78837" peptide_ref="Pep_PRALAVAVLCTLILL" start="197" end="211" pre="K" post="K" isDecoy="true" id="PepEv_79033_PRALAVAVLCTLILL_197"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
856 <PeptideEvidence dBSequence_ref="DBSeq79051" peptide_ref="Pep_PRALAVAVLCTLILL" start="190" end="204" pre="K" post="K" isDecoy="true" id="PepEv_79240_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
857 <PeptideEvidence dBSequence_ref="DBSeq79258" peptide_ref="Pep_PRALAVAVLCTLILL" start="190" end="204" pre="K" post="K" isDecoy="true" id="PepEv_79447_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
858 <PeptideEvidence dBSequence_ref="DBSeq79465" peptide_ref="Pep_PRALAVAVLCTLILL" start="190" end="204" pre="K" post="K" isDecoy="true" id="PepEv_79654_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
859 <PeptideEvidence dBSequence_ref="DBSeq79672" peptide_ref="Pep_PRALAVAVLCTLILL" start="161" end="175" pre="K" post="K" isDecoy="true" id="PepEv_79832_PRALAVAVLCTLILL_161"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
860 <PeptideEvidence dBSequence_ref="DBSeq100983" peptide_ref="Pep_PRALAVAVLCTLILL" start="198" end="212" pre="K" post="K" isDecoy="true" id="PepEv_101180_PRALAVAVLCTLILL_198"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
861 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_CTNFSSCWSDGKM" start="292" end="304" pre="K" post="F" isDecoy="false" id="PepEv_9796_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
862 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_CTNFSSCWSDGKM" start="292" end="304" pre="K" post="F" isDecoy="false" id="PepEv_17407_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
863 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_CTNFSSCWSDGKM" start="216" end="228" pre="K" post="F" isDecoy="false" id="PepEv_38729_CTNFSSCWSDGKM_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
864 </SequenceCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
865 <AnalysisCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
866 <SpectrumIdentification spectrumIdentificationProtocol_ref="SearchProtocol_1" spectrumIdentificationList_ref="SI_LIST_1" id="SpecIdent_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
867 <InputSpectra spectraData_ref="SID_1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
868 <SearchDatabaseRef searchDatabase_ref="SearchDB_1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
869 </SpectrumIdentification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
870 </AnalysisCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
871 <AnalysisProtocolCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
872 <SpectrumIdentificationProtocol analysisSoftware_ref="ID_software" id="SearchProtocol_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
873 <SearchType>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
874 <cvParam cvRef="PSI-MS" accession="MS:1001083" name="ms-ms search"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
875 </SearchType>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
876 <AdditionalSearchParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
877 <cvParam cvRef="PSI-MS" accession="MS:1001211" name="parent mass type mono"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
878 <cvParam cvRef="PSI-MS" accession="MS:1001256" name="fragment mass type mono"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
879 <userParam name="TargetDecoyApproach" value="true"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
880 <userParam name="MinIsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
881 <userParam name="MaxIsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
882 <userParam name="FragmentMethod" value="As written in the spectrum or CID if no info"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
883 <userParam name="Instrument" value="LowRes"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
884 <userParam name="Protocol" value="Standard"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
885 <userParam name="NumTolerableTermini" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
886 <userParam name="NumMatchesPerSpec" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
887 <userParam name="MaxNumModifications" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
888 <userParam name="MinPepLength" value="6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
889 <userParam name="MaxPepLength" value="40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
890 <userParam name="MinCharge" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
891 <userParam name="MaxCharge" value="3"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
892 <userParam name="ChargeCarrierMass" value="1.00727649"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
893 </AdditionalSearchParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
894 <ModificationParams/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
895 <Enzymes>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
896 <Enzyme semiSpecific="true" missedCleavages="1000" id="Tryp">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
897 <EnzymeName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
898 <cvParam cvRef="PSI-MS" accession="MS:1001251" name="Trypsin"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
899 </EnzymeName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
900 </Enzyme>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
901 </Enzymes>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
902 <ParentTolerance>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
903 <cvParam cvRef="PSI-MS" accession="MS:1001412" name="search tolerance plus value" value="50.0" unitAccession="UO:0000169" unitName="parts per million" unitCvRef="UO"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
904 <cvParam cvRef="PSI-MS" accession="MS:1001413" name="search tolerance minus value" value="50.0" unitAccession="UO:0000169" unitName="parts per million" unitCvRef="UO"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
905 </ParentTolerance>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
906 <Threshold>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
907 <cvParam cvRef="PSI-MS" accession="MS:1001494" name="no threshold"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
908 </Threshold>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
909 </SpectrumIdentificationProtocol>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
910 </AnalysisProtocolCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
911 <DataCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
912 <Inputs>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
913 <SearchDatabase numDatabaseSequences="144" location="/private/tmp/tmp2Ljjxo/job_working_directory/000/3/working/cow.protein.PRG2012-subset.fasta" id="SearchDB_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
914 <FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
915 <cvParam cvRef="PSI-MS" accession="MS:1001348" name="FASTA format"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
916 </FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
917 <DatabaseName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
918 <userParam name="cow.protein.PRG2012-subset.fasta"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
919 </DatabaseName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
920 <cvParam cvRef="PSI-MS" accession="MS:1001197" name="DB composition target+decoy"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
921 <cvParam cvRef="PSI-MS" accession="MS:1001283" name="decoy DB accession regexp" value="^XXX"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
922 <cvParam cvRef="PSI-MS" accession="MS:1001195" name="decoy DB type reverse"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
923 </SearchDatabase>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
924 <SpectraData location="/private/tmp/tmp2Ljjxo/job_working_directory/000/3/working/201208-378803.mzML" id="SID_1" name="201208-378803.mzML">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
925 <FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
927 </FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
930 </SpectrumIDFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
931 </SpectraData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
932 </Inputs>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
933 <AnalysisData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
934 <SpectrumIdentificationList id="SI_LIST_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
935 <FragmentationTable>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
936 <Measure id="Measure_MZ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
938 </Measure>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
939 </FragmentationTable>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
940 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1224 experiment=2" spectraData_ref="SID_1" id="SIR_86">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
941 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="576.2933349609375" calculatedMassToCharge="576.2904663085938" peptide_ref="Pep_ISELFDKLDSMSVDK" rank="1" passThreshold="true" id="SII_86_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
942 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84238_ISELFDKLDSMSVDK_607"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
943 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85050_ISELFDKLDSMSVDK_603"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
944 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85817_ISELFDKLDSMSVDK_558"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
945 <PeptideEvidenceRef peptideEvidence_ref="PepEv_93903_ISELFDKLDSMSVDK_418"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
951 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
952 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
953 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
954 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
955 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
956 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=2" spectraData_ref="SID_1" id="SIR_39">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
957 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="452.254638671875" calculatedMassToCharge="451.93316650390625" peptide_ref="Pep_PKNDPKLKTQGK" rank="1" passThreshold="true" id="SII_39_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
958 <PeptideEvidenceRef peptideEvidence_ref="PepEv_31410_PKNDPKLKTQGK_318"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
959 <PeptideEvidenceRef peptideEvidence_ref="PepEv_32123_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
960 <PeptideEvidenceRef peptideEvidence_ref="PepEv_32809_PKNDPKLKTQGK_235"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
961 <PeptideEvidenceRef peptideEvidence_ref="PepEv_47926_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
963 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="54"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
964 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.911494E-7"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
965 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.0355328"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
966 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
967 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
968 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
969 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
970 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
971 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
972 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1215 experiment=4" spectraData_ref="SID_1" id="SIR_64">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
973 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="674.3531494140625" calculatedMassToCharge="673.8528442382812" peptide_ref="Pep_EPISVSSQQMLK" rank="1" passThreshold="true" id="SII_64_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
974 <PeptideEvidenceRef peptideEvidence_ref="PepEv_47057_EPISVSSQQMLK_213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
975 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
976 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="62"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
977 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.9064777E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
978 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.076016985"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
979 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
980 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
981 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
982 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
983 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
984 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
985 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1211 experiment=5" spectraData_ref="SID_1" id="SIR_49">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
986 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="498.2347412109375" calculatedMassToCharge="497.9245300292969" peptide_ref="Pep_VWGFKVAGAQDEGK" rank="1" passThreshold="true" id="SII_49_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
987 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105272_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
988 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108178_VWGFKVAGAQDEGK_952"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
989 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109278_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
990 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110378_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
991 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
992 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
993 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.5485353E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
994 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.10241799"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
995 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
996 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
997 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
998 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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999 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1000 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1001 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1219 experiment=4" spectraData_ref="SID_1" id="SIR_79">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1002 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="482.21160888671875" calculatedMassToCharge="482.2301330566406" peptide_ref="Pep_PTAEFQDR" rank="1" passThreshold="true" id="SII_79_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1011 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1012 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1013 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1015 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="467.236083984375" calculatedMassToCharge="467.2357482910156" peptide_ref="Pep_TVMENFVAFVDK" rank="1" passThreshold="true" id="SII_36_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1016 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44505_TVMENFVAFVDK_569"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1023 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1024 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1025 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1026 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1027 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1239 experiment=2" spectraData_ref="SID_1" id="SIR_102">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1028 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="486.2041320800781" calculatedMassToCharge="485.8894958496094" peptide_ref="Pep_ESRCSRESRCSR" rank="1" passThreshold="true" id="SII_102_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1029 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72991_ESRCSRESRCSR_7512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1030 <PeptideEvidenceRef peptideEvidence_ref="PepEv_78490_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1031 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99888_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1037 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.75"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1038 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1039 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1040 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1041 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1042 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=3" spectraData_ref="SID_1" id="SIR_51">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1043 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="577.2473754882812" calculatedMassToCharge="576.9359130859375" peptide_ref="Pep_ACCEELTAEYEKALR" rank="1" passThreshold="true" id="SII_51_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1044 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100134_ACCEELTAEYEKALR_223"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1045 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="3"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1046 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1047 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.329578E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1048 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.21497919"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1049 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1050 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1051 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1052 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1053 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1054 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1055 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=4" spectraData_ref="SID_1" id="SIR_45">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1056 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="547.7760620117188" calculatedMassToCharge="547.2616577148438" peptide_ref="Pep_EVEDEGFLR" rank="1" passThreshold="true" id="SII_45_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1057 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67474_EVEDEGFLR_1995"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1058 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75015_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1059 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96413_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1060 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-7"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1061 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1062 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.260432E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1063 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.28565443"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1064 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1065 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1066 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1067 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1068 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1069 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1070 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1235 experiment=2" spectraData_ref="SID_1" id="SIR_98">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1110 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1111 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1124 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1125 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1126 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1127 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1128 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1428 experiment=2" spectraData_ref="SID_1" id="SIR_105">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1138 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1146 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92730_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1154 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1155 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1156 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1159 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9220_PNTEPTHHFI_460"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1166 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1167 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1168 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1169 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1170 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=5" spectraData_ref="SID_1" id="SIR_68">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1171 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="575.8047485351562" calculatedMassToCharge="575.8055419921875" peptide_ref="Pep_EGVAICKAGFR" rank="1" passThreshold="true" id="SII_68_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1172 <PeptideEvidenceRef peptideEvidence_ref="PepEv_103307_EGVAICKAGFR_227"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1178 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1179 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1180 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1181 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1182 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1183 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1217 experiment=4" spectraData_ref="SID_1" id="SIR_71">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1184 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="571.8231811523438" calculatedMassToCharge="571.3450317382812" peptide_ref="Pep_QLEDILVLAK" rank="1" passThreshold="true" id="SII_71_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1185 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14994_QLEDILVLAK_5490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1186 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20563_QLEDILVLAK_3448"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1187 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41885_QLEDILVLAK_3372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1188 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1190 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.18926155E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1192 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1193 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1194 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1195 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1196 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1197 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1198 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1223 experiment=3" spectraData_ref="SID_1" id="SIR_85">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1199 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="478.24365234375" calculatedMassToCharge="478.26397705078125" peptide_ref="Pep_AAQGALQPSL" rank="1" passThreshold="true" id="SII_85_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1200 <PeptideEvidenceRef peptideEvidence_ref="PepEv_5629_AAQGALQPSL_1030"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1201 <PeptideEvidenceRef peptideEvidence_ref="PepEv_6827_AAQGALQPSL_975"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1202 <PeptideEvidenceRef peptideEvidence_ref="PepEv_34949_AAQGALQPSL_1077"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1203 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1204 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1205 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.2600591E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1207 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1208 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1209 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1210 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1211 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1212 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1230 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99524_FEIWVELLKYLEEIRGK_5036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1237 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1238 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1239 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1240 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1241 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1231 experiment=2" spectraData_ref="SID_1" id="SIR_96">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1242 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="490.2488098144531" calculatedMassToCharge="489.9119567871094" peptide_ref="Pep_TIFDTEIESTSPK" rank="1" passThreshold="true" id="SII_96_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1243 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27908_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1244 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28724_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1245 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29536_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1246 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37762_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1251 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1252 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1253 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1254 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1255 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1256 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1257 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1236 experiment=2" spectraData_ref="SID_1" id="SIR_99">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1258 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="482.2271423339844" calculatedMassToCharge="481.73980712890625" peptide_ref="Pep_DTNIQICR" rank="1" passThreshold="true" id="SII_99_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1259 <PeptideEvidenceRef peptideEvidence_ref="PepEv_60768_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1260 <PeptideEvidenceRef peptideEvidence_ref="PepEv_62021_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1261 <PeptideEvidenceRef peptideEvidence_ref="PepEv_90041_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1262 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1263 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1264 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.2036973E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1265 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.86257124"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1266 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1267 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1268 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1269 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1270 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1271 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1272 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1220 experiment=2" spectraData_ref="SID_1" id="SIR_80">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1274 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13046_QLEGRLQDLR_3542"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1275 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-8"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1277 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.3277607E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1279 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1280 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1281 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1282 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1283 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1284 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1285 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1203 experiment=3" spectraData_ref="SID_1" id="SIR_30">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1286 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="520.2384033203125" calculatedMassToCharge="519.742919921875" peptide_ref="Pep_RAFQECER" rank="1" passThreshold="true" id="SII_30_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1287 <PeptideEvidenceRef peptideEvidence_ref="PepEv_83736_RAFQECER_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1288 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84548_RAFQECER_101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1289 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85315_RAFQECER_56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1290 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1291 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="55"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1294 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1295 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1296 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1297 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1298 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1299 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1300 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1181 experiment=2" spectraData_ref="SID_1" id="SIR_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1301 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.2500305175781" peptide_ref="Pep_LECTNLYR" rank="1" passThreshold="true" id="SII_1_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1302 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10101_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1303 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17712_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1304 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39034_LECTNLYR_521"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1306 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1307 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.9523253E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1308 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.1555992"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1309 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1310 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1311 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1312 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1313 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1314 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1315 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1202 experiment=2" spectraData_ref="SID_1" id="SIR_27">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1316 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="489.23614501953125" calculatedMassToCharge="489.2486877441406" peptide_ref="Pep_LMLLSRDDSGSGSK" rank="1" passThreshold="true" id="SII_27_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1317 <PeptideEvidenceRef peptideEvidence_ref="PepEv_16054_LMLLSRDDSGSGSK_6550"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1318 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21623_LMLLSRDDSGSGSK_4508"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1319 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42945_LMLLSRDDSGSGSK_4432"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1320 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1321 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="75"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1322 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.1620126E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1323 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.270718"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1324 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1325 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1326 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1327 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1328 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1329 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1330 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1207 experiment=2" spectraData_ref="SID_1" id="SIR_35">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1331 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="540.2457885742188" calculatedMassToCharge="540.2278442382812" peptide_ref="Pep_ATEGTQLFNDYCEQ" rank="1" passThreshold="true" id="SII_35_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1332 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105372_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1333 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108278_ATEGTQLFNDYCEQ_1052"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1334 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109378_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1335 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110478_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1336 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1337 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1338 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.191305E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1339 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.2824897"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1340 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1341 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1342 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1343 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1344 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1345 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1346 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1222 experiment=2" spectraData_ref="SID_1" id="SIR_83">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1347 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="582.2852172851562" calculatedMassToCharge="582.3135986328125" peptide_ref="Pep_IQNGALNCEEKLTLAK" rank="1" passThreshold="true" id="SII_83_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1348 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10016_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1349 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17627_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1350 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38949_IQNGALNCEEKLTLAK_436"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1351 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1352 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="94"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1353 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.4877667E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1354 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.4119875"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1356 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1357 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1358 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1359 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1360 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1361 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=3" spectraData_ref="SID_1" id="SIR_91">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1362 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="710.8026733398438" calculatedMassToCharge="710.7939453125" peptide_ref="Pep_CVCDECGRGFGFK" rank="1" passThreshold="true" id="SII_91_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1363 <PeptideEvidenceRef peptideEvidence_ref="PepEv_801_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1364 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1418_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1365 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2035_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1366 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2651_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1367 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3248_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1368 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3837_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1369 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24557_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1370 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25174_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1371 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25791_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1372 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26407_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1373 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27004_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1374 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27593_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1375 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1376 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1377 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.7364465E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1379 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1380 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1381 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1382 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1383 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1384 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1385 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=3" spectraData_ref="SID_1" id="SIR_55">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1386 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="547.2749633789062" calculatedMassToCharge="547.2713012695312" peptide_ref="Pep_RMMESRQR" rank="1" passThreshold="true" id="SII_55_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1387 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64768_RMMESRQR_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1388 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1389 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="42"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1390 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.915081E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1391 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.532441"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1392 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1393 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1394 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1395 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1396 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1397 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1398 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1219 experiment=2" spectraData_ref="SID_1" id="SIR_77">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1399 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="487.2433166503906" calculatedMassToCharge="487.2510681152344" peptide_ref="Pep_RSDVEQLDQEIK" rank="1" passThreshold="true" id="SII_77_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1400 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14282_RSDVEQLDQEIK_4778"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1401 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19851_RSDVEQLDQEIK_2736"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1402 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41173_RSDVEQLDQEIK_2660"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1403 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-10"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1404 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="80"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1405 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.2131483E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1406 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.6799086"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1407 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1408 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1409 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1410 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1411 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1412 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1413 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1228 experiment=3" spectraData_ref="SID_1" id="SIR_89">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1414 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="606.2748413085938" calculatedMassToCharge="605.7780151367188" peptide_ref="Pep_WQEYQSRVD" rank="1" passThreshold="true" id="SII_89_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1415 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9896_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1416 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17507_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1417 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38829_WQEYQSRVD_316"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1418 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1419 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="36"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1420 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.2569478E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1421 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.6748536"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1422 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1423 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1424 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1425 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1426 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1427 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1428 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=3" spectraData_ref="SID_1" id="SIR_40">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1430 <PeptideEvidenceRef peptideEvidence_ref="PepEv_5618_RKFIIHRGKRKAAQ_1019"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1431 <PeptideEvidenceRef peptideEvidence_ref="PepEv_6816_RKFIIHRGKRKAAQ_964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1432 <PeptideEvidenceRef peptideEvidence_ref="PepEv_34938_RKFIIHRGKRKAAQ_1066"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1439 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1440 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1441 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1442 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1443 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1192 experiment=2" spectraData_ref="SID_1" id="SIR_10">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1444 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="443.2386779785156" calculatedMassToCharge="442.91363525390625" peptide_ref="Pep_VKDIVNLTDVNP" rank="1" passThreshold="true" id="SII_10_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1445 <PeptideEvidenceRef peptideEvidence_ref="PepEv_70903_VKDIVNLTDVNP_5424"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1446 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1447 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1448 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.838571E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1450 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1451 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1452 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1453 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1454 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1455 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1456 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=4" spectraData_ref="SID_1" id="SIR_75">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1457 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="647.8163452148438" calculatedMassToCharge="647.343505859375" peptide_ref="Pep_KELVDQRYDK" rank="1" passThreshold="true" id="SII_75_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1458 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67447_KELVDQRYDK_1968"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1459 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74988_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1460 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96386_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1461 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1462 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1463 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.8764297E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1464 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9277989"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1465 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1466 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1467 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1468 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1469 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1470 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="647.8163452148438" calculatedMassToCharge="647.3038940429688" peptide_ref="Pep_QNIDRCYPER" rank="2" passThreshold="true" id="SII_75_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1471 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105840_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1472 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106560_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1473 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110907_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1474 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1475 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1476 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.8764297E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1477 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9277989"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1478 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1479 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1480 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1481 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1482 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1483 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1484 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=2" spectraData_ref="SID_1" id="SIR_65">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1485 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="464.21527099609375" calculatedMassToCharge="463.9016418457031" peptide_ref="Pep_QLAQQTEQKGCR" rank="1" passThreshold="true" id="SII_65_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1486 <PeptideEvidenceRef peptideEvidence_ref="PepEv_11117_QLAQQTEQKGCR_1613"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1487 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1488 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="61"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1489 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.9378592E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1490 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9688725"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1491 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1492 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1493 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1494 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1495 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1496 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1497 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1193 experiment=2" spectraData_ref="SID_1" id="SIR_12">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1498 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="458.7034606933594" calculatedMassToCharge="458.7241516113281" peptide_ref="Pep_IFELEEH" rank="1" passThreshold="true" id="SII_12_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1499 <PeptideEvidenceRef peptideEvidence_ref="PepEv_66874_IFELEEH_1395"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1500 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74415_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1501 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95813_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1507 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1508 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1509 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1510 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1511 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1512 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=2" spectraData_ref="SID_1" id="SIR_50">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1513 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="653.3101806640625" calculatedMassToCharge="652.9561767578125" peptide_ref="Pep_VFEEMIEPYCLHESCK" rank="1" passThreshold="true" id="SII_50_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1514 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49367_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1515 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52273_VFEEMIEPYCLHESCK_1022"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1516 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53373_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1517 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54473_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1520 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.4227086E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1522 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1523 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1524 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1525 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1526 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1527 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1528 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=5" spectraData_ref="SID_1" id="SIR_57">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1529 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="575.3018188476562" calculatedMassToCharge="575.3118286132812" peptide_ref="Pep_GLRFDWSLR" rank="1" passThreshold="true" id="SII_57_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1530 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106357_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1531 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107077_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1532 <PeptideEvidenceRef peptideEvidence_ref="PepEv_111424_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1533 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1534 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1535 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.5088716E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1536 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.1674106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1537 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1538 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1539 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1540 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1541 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1542 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1543 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=4" spectraData_ref="SID_1" id="SIR_92">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1544 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="832.8515625" calculatedMassToCharge="832.825439453125" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" rank="1" passThreshold="true" id="SII_92_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1545 <PeptideEvidenceRef peptideEvidence_ref="PepEv_83890_VLETLGINKRKIVNQLSNSLTR_259"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1546 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84702_VLETLGINKRKIVNQLSNSLTR_255"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1547 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85469_VLETLGINKRKIVNQLSNSLTR_210"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1548 <PeptideEvidenceRef peptideEvidence_ref="PepEv_93555_VLETLGINKRKIVNQLSNSLTR_70"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1549 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-25"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1550 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="107"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1551 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.553615E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1552 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.2965865"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1553 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1554 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1555 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1556 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1557 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1558 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1559 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1234 experiment=2" spectraData_ref="SID_1" id="SIR_97">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1560 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="516.2442626953125" calculatedMassToCharge="516.2300415039062" peptide_ref="Pep_DPDNSIELE" rank="1" passThreshold="true" id="SII_97_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1561 <PeptideEvidenceRef peptideEvidence_ref="PepEv_66353_DPDNSIELE_874"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1562 <PeptideEvidenceRef peptideEvidence_ref="PepEv_73894_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1563 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95292_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1564 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1565 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1566 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.5706063E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1567 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.1916993"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1568 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1569 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1570 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1571 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1572 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1573 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1574 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1580 experiment=2" spectraData_ref="SID_1" id="SIR_106">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1575 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="533.2622680664062" calculatedMassToCharge="532.9508666992188" peptide_ref="Pep_LIIQLEQGDEPWR" rank="1" passThreshold="true" id="SII_106_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1576 <PeptideEvidenceRef peptideEvidence_ref="PepEv_324_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1577 <PeptideEvidenceRef peptideEvidence_ref="PepEv_941_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1578 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1558_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1579 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2175_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1580 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2771_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1581 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3360_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1582 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24080_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1583 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24697_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1584 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25314_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1585 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25931_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1586 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26527_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1587 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27116_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1588 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-31"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1589 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="38"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1590 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.964108E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1591 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.387492"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1592 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1593 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1594 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1595 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1596 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1597 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1598 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=5" spectraData_ref="SID_1" id="SIR_53">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1599 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="584.6378784179688" calculatedMassToCharge="584.2821044921875" peptide_ref="Pep_DPAPEGEIEMLDHAVK" rank="1" passThreshold="true" id="SII_53_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1600 <PeptideEvidenceRef peptideEvidence_ref="PepEv_68969_DPAPEGEIEMLDHAVK_3490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1601 <PeptideEvidenceRef peptideEvidence_ref="PepEv_76510_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1602 <PeptideEvidenceRef peptideEvidence_ref="PepEv_97908_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1603 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1604 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1605 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.189589E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1606 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.505793"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1607 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1608 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1609 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1610 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1611 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1612 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1613 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1191 experiment=3" spectraData_ref="SID_1" id="SIR_9">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1614 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="400.6839294433594" calculatedMassToCharge="400.6896057128906" peptide_ref="Pep_EVMEHR" rank="1" passThreshold="true" id="SII_9_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1615 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15267_EVMEHR_5763"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1616 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20836_EVMEHR_3721"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1617 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42158_EVMEHR_3645"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1618 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1619 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="27"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1620 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.842939E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1621 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.6465752"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1622 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1623 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1624 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1625 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1626 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1627 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1628 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1191 experiment=2" spectraData_ref="SID_1" id="SIR_8">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1629 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="435.7113037109375" calculatedMassToCharge="435.212890625" peptide_ref="Pep_YNKCVDK" rank="1" passThreshold="true" id="SII_8_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1630 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100177_YNKCVDK_266"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1631 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-9"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1632 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1633 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.040255E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1634 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.7402081"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1635 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1636 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1637 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1638 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1639 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1640 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1641 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1187 experiment=2" spectraData_ref="SID_1" id="SIR_4">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1642 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="441.6909484863281" calculatedMassToCharge="441.2059326171875" peptide_ref="Pep_GFGRGCER" rank="1" passThreshold="true" id="SII_4_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1643 <PeptideEvidenceRef peptideEvidence_ref="PepEv_56555_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1644 <PeptideEvidenceRef peptideEvidence_ref="PepEv_57172_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1645 <PeptideEvidenceRef peptideEvidence_ref="PepEv_57789_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1646 <PeptideEvidenceRef peptideEvidence_ref="PepEv_58406_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1647 <PeptideEvidenceRef peptideEvidence_ref="PepEv_59022_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1648 <PeptideEvidenceRef peptideEvidence_ref="PepEv_59619_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1649 <PeptideEvidenceRef peptideEvidence_ref="PepEv_80311_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1650 <PeptideEvidenceRef peptideEvidence_ref="PepEv_80928_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1651 <PeptideEvidenceRef peptideEvidence_ref="PepEv_81545_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1652 <PeptideEvidenceRef peptideEvidence_ref="PepEv_82162_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1653 <PeptideEvidenceRef peptideEvidence_ref="PepEv_82778_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1654 <PeptideEvidenceRef peptideEvidence_ref="PepEv_83375_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1655 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1656 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="76"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1657 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.454565E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1659 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1660 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1661 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1662 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1663 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1664 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1665 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=5" spectraData_ref="SID_1" id="SIR_42">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1666 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="404.19219970703125" calculatedMassToCharge="404.2010192871094" peptide_ref="Pep_QLAQKYNCDK" rank="1" passThreshold="true" id="SII_42_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1667 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23958_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1668 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46423_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1669 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1670 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="51"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1671 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.684107E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1672 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.037758"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1673 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1674 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1675 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1676 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1677 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1678 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1679 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1202 experiment=3" spectraData_ref="SID_1" id="SIR_28">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1680 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="423.6785888671875" calculatedMassToCharge="423.6850280761719" peptide_ref="Pep_DLGEEHF" rank="1" passThreshold="true" id="SII_28_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1681 <PeptideEvidenceRef peptideEvidence_ref="PepEv_43973_DLGEEHF_37"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1682 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-12"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1683 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="36"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1684 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.7868164E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1685 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.0307846"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1686 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1687 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1688 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1689 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1690 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1691 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1692 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1215 experiment=3" spectraData_ref="SID_1" id="SIR_63">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1693 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="613.7810668945312" calculatedMassToCharge="613.30859375" peptide_ref="Pep_DLPFLSNEYK" rank="1" passThreshold="true" id="SII_63_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1694 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12725_DLPFLSNEYK_3221"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1695 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1696 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1697 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.023354E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1698 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.1718724"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1699 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1700 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1701 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1702 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1703 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1704 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1705 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1627 experiment=2" spectraData_ref="SID_1" id="SIR_108">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1706 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="582.2650756835938" calculatedMassToCharge="582.2919921875" peptide_ref="Pep_DAHQKELVDQRYDK" rank="1" passThreshold="true" id="SII_108_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1707 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67443_DAHQKELVDQRYDK_1964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1708 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74984_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1709 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96382_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1711 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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diff changeset
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1898 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1911 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1926 </SpectrumIdentificationItem>
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1927 </SpectrumIdentificationResult>
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1928 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1214 experiment=2" spectraData_ref="SID_1" id="SIR_58">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1929 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="510.2083740234375" calculatedMassToCharge="510.1940612792969" peptide_ref="Pep_MMSASSYNE" rank="1" passThreshold="true" id="SII_58_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1930 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9232_MMSASSYNE_472"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1931 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-20"/>
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1932 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1933 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.2431844E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1934 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.891185"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1935 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1936 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1937 <userParam name="IsotopeError" value="0"/>
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1938 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1939 </SpectrumIdentificationItem>
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1940 </SpectrumIdentificationResult>
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1941 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1188 experiment=3" spectraData_ref="SID_1" id="SIR_6">
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1942 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="428.7035217285156" calculatedMassToCharge="428.210693359375" peptide_ref="Pep_LMHDPSR" rank="1" passThreshold="true" id="SII_6_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1943 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72145_LMHDPSR_6666"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1944 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77646_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1945 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99044_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1946 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
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1947 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="93"/>
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1948 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4716851E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1949 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.7280927"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1950 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
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1951 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1952 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1953 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1954 </SpectrumIdentificationItem>
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1955 </SpectrumIdentificationResult>
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1956 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1221 experiment=2" spectraData_ref="SID_1" id="SIR_81">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1957 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="412.68389892578125" calculatedMassToCharge="412.1952209472656" peptide_ref="Pep_YDGLVEQ" rank="1" passThreshold="true" id="SII_81_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1958 <PeptideEvidenceRef peptideEvidence_ref="PepEv_71732_YDGLVEQ_6253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1959 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77233_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1960 <PeptideEvidenceRef peptideEvidence_ref="PepEv_98631_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1961 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
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galaxyp
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1962 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1963 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4825392E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1964 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.770339"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1965 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1966 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1967 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1968 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1969 </SpectrumIdentificationItem>
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1970 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="412.68389892578125" calculatedMassToCharge="412.1976013183594" peptide_ref="Pep_RCYPER" rank="2" passThreshold="true" id="SII_81_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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parents:
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1971 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105844_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1972 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106564_RCYPER_15"/>
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1973 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110911_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1974 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
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1975 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
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1976 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4825392E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1977 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.7338686"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1978 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1979 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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parents:
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1980 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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1981 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1982 </SpectrumIdentificationItem>
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1983 </SpectrumIdentificationResult>
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1984 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1217 experiment=5" spectraData_ref="SID_1" id="SIR_72">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1985 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="476.6978454589844" calculatedMassToCharge="476.213623046875" peptide_ref="Pep_ARGCSEELS" rank="1" passThreshold="true" id="SII_72_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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parents:
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1986 <PeptideEvidenceRef peptideEvidence_ref="PepEv_7575_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1987 <PeptideEvidenceRef peptideEvidence_ref="PepEv_8430_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1988 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35697_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1989 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36552_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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parents:
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1990 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-25"/>
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1991 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="35"/>
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1992 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4944564E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1993 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.8797894"/>
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1994 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
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1995 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1996 <userParam name="IsotopeError" value="1"/>
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1997 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1998 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1999 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2000 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=2" spectraData_ref="SID_1" id="SIR_73">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2001 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="577.770751953125" calculatedMassToCharge="577.791748046875" peptide_ref="Pep_AMFEELSSLK" rank="1" passThreshold="true" id="SII_73_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2002 <PeptideEvidenceRef peptideEvidence_ref="PepEv_61519_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2003 <PeptideEvidenceRef peptideEvidence_ref="PepEv_62771_AMFEELSSLK_944"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2004 <PeptideEvidenceRef peptideEvidence_ref="PepEv_90792_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2005 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2006 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2007 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.570459E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2008 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.2084956"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2009 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2010 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2011 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2012 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
2013 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2014 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2015 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1238 experiment=2" spectraData_ref="SID_1" id="SIR_101">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2016 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="455.6540832519531" calculatedMassToCharge="455.3005065917969" peptide_ref="Pep_LIRRQRLRPR" rank="1" passThreshold="true" id="SII_101_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2017 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36895_LIRRQRLRPR_13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2018 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2019 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="25"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2020 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.6960995E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2021 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.70519"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2022 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2023 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2024 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2025 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2026 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2027 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2028 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1201 experiment=2" spectraData_ref="SID_1" id="SIR_24">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2029 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="440.1820373535156" calculatedMassToCharge="439.69287109375" peptide_ref="Pep_CDDQNKR" rank="1" passThreshold="true" id="SII_24_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2030 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12435_CDDQNKR_2931"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2031 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2032 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2033 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.7229663E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2034 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.706129"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2035 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2036 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2037 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2038 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2039 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2040 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2041 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=3" spectraData_ref="SID_1" id="SIR_44">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2042 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="461.7162170410156" calculatedMassToCharge="461.7023620605469" peptide_ref="Pep_EACFAVEGP" rank="1" passThreshold="true" id="SII_44_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2043 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44524_EACFAVEGP_588"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2044 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-18"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2045 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2046 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.7894078E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2047 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.040246"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2048 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2049 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2050 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2051 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2052 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2053 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2054 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=3" spectraData_ref="SID_1" id="SIR_74">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2055 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="471.2165222167969" calculatedMassToCharge="470.9001770019531" peptide_ref="Pep_SKEVSNLEFSDR" rank="1" passThreshold="true" id="SII_74_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2056 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12758_SKEVSNLEFSDR_3254"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2057 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-27"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2058 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2059 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.8095516E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2060 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.215225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2061 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2062 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2063 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2064 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2065 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2066 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2067 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1203 experiment=2" spectraData_ref="SID_1" id="SIR_29">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2068 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="533.7421264648438" calculatedMassToCharge="533.7360229492188" peptide_ref="Pep_EKTGNTSSDQ" rank="1" passThreshold="true" id="SII_29_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2069 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63045_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2082 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2085 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106237_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2086 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106957_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2087 <PeptideEvidenceRef peptideEvidence_ref="PepEv_111304_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2094 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2095 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2096 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2097 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2098 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1221 experiment=3" spectraData_ref="SID_1" id="SIR_82">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2099 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="684.796142578125" calculatedMassToCharge="684.8268432617188" peptide_ref="Pep_EGQMVEEKYQK" rank="1" passThreshold="true" id="SII_82_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2100 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15510_EGQMVEEKYQK_6006"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2101 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21079_EGQMVEEKYQK_3964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2102 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42401_EGQMVEEKYQK_3888"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2104 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="85"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2105 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.1989181E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2106 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="8.731244"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2107 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2108 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2109 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2110 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2111 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2112 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="684.796142578125" calculatedMassToCharge="684.2944946289062" peptide_ref="Pep_NTPDVMMSDTEK" rank="2" passThreshold="true" id="SII_82_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2113 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105153_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2114 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108027_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2115 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109159_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2116 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110259_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2117 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2118 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="85"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2119 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.1989181E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2120 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="8.767746"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2121 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2122 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2123 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2124 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2125 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2126 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2127 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1214 experiment=3" spectraData_ref="SID_1" id="SIR_59">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2128 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="493.2047424316406" calculatedMassToCharge="493.2185363769531" peptide_ref="Pep_KECGAHSEDAVCTK" rank="1" passThreshold="true" id="SII_59_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2129 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100431_KECGAHSEDAVCTK_520"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2130 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2131 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="82"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2132 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.555741E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2133 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="10.270757"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2134 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2135 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2136 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2137 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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2138 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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2139 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2140 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=3" spectraData_ref="SID_1" id="SIR_66">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2178 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2206 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2207 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2234 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2241 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35428_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2242 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36283_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2247 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2248 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2249 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2250 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2251 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2252 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2253 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1281 experiment=2" spectraData_ref="SID_1" id="SIR_103">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2254 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="591.745361328125" calculatedMassToCharge="591.767333984375" peptide_ref="Pep_TEGPTYETER" rank="1" passThreshold="true" id="SII_103_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2255 <PeptideEvidenceRef peptideEvidence_ref="PepEv_70817_TEGPTYETER_5338"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2258 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.2281268E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2260 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2261 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2262 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2263 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2264 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2265 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2266 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1230 experiment=3" spectraData_ref="SID_1" id="SIR_95">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2267 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="613.2512817382812" calculatedMassToCharge="613.267333984375" peptide_ref="Pep_ASINPNNDSWDYALEE" rank="1" passThreshold="true" id="SII_95_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2268 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72297_ASINPNNDSWDYALEE_6818"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2269 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77796_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2270 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99194_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2272 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="66"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2273 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.8350522E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2275 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2276 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2277 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2278 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2279 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2280 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2281 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=5" spectraData_ref="SID_1" id="SIR_76">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2282 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="587.7717895507812" calculatedMassToCharge="587.2727661132812" peptide_ref="Pep_KQEESAEAGAPG" rank="1" passThreshold="true" id="SII_76_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2283 <PeptideEvidenceRef peptideEvidence_ref="PepEv_5042_KQEESAEAGAPG_443"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2284 <PeptideEvidenceRef peptideEvidence_ref="PepEv_6240_KQEESAEAGAPG_388"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2285 <PeptideEvidenceRef peptideEvidence_ref="PepEv_34362_KQEESAEAGAPG_490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2286 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-31"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2287 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="52"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2290 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2291 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2292 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2293 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2294 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2295 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2296 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1201 experiment=3" spectraData_ref="SID_1" id="SIR_25">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2297 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="512.2169799804688" calculatedMassToCharge="512.2411499023438" peptide_ref="Pep_PFVCLECGR" rank="1" passThreshold="true" id="SII_25_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2298 <PeptideEvidenceRef peptideEvidence_ref="PepEv_632_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2299 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1249_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2300 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1866_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2301 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2482_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2302 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3079_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2303 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3668_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2304 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24388_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2305 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25005_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2306 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25622_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2307 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26238_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2308 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26835_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2309 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27424_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2310 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2311 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2312 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.290015E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2313 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="20.813036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2314 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2315 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2316 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2317 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2318 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2319 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2320 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1208 experiment=3" spectraData_ref="SID_1" id="SIR_38">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2321 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="490.20404052734375" calculatedMassToCharge="490.22198486328125" peptide_ref="Pep_ENLEQAFE" rank="1" passThreshold="true" id="SII_38_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2322 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9833_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2323 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17444_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2324 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38766_ENLEQAFE_253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2325 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2326 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="76"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2327 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.55107E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2328 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="21.727999"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2329 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2330 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2331 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2332 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2333 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2334 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2335 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1204 experiment=4" spectraData_ref="SID_1" id="SIR_33">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2336 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="464.1875305175781" calculatedMassToCharge="464.1719665527344" peptide_ref="Pep_WDFDEES" rank="1" passThreshold="true" id="SII_33_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2337 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63479_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2338 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64334_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2339 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91601_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2340 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92456_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2341 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2342 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="32"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2343 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.305883E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2344 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="24.543758"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2345 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2346 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2347 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2348 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2349 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2350 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="464.1875305175781" calculatedMassToCharge="463.68768310546875" peptide_ref="Pep_HYCGKCCL" rank="2" passThreshold="true" id="SII_33_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2351 <PeptideEvidenceRef peptideEvidence_ref="PepEv_30190_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2352 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44989_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2353 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2354 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="32"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2388 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2389 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2390 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2392 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="413.6736755371094" calculatedMassToCharge="413.19049072265625" peptide_ref="Pep_EGDYVSR" rank="1" passThreshold="true" id="SII_56_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2393 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84403_EGDYVSR_772"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2394 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85215_EGDYVSR_768"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2395 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85982_EGDYVSR_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2396 <PeptideEvidenceRef peptideEvidence_ref="PepEv_94068_EGDYVSR_583"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2402 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2403 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2404 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2405 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2406 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2407 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1200 experiment=2" spectraData_ref="SID_1" id="SIR_21">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2408 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="563.2123413085938" calculatedMassToCharge="563.2036743164062" peptide_ref="Pep_EEDASSCQEQ" rank="1" passThreshold="true" id="SII_21_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2409 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13866_EEDASSCQEQ_4362"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2410 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19435_EEDASSCQEQ_2320"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2411 <PeptideEvidenceRef peptideEvidence_ref="PepEv_40757_EEDASSCQEQ_2244"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2412 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2413 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="79"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2416 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2417 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2418 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2419 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2420 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2421 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2422 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1183 experiment=2" spectraData_ref="SID_1" id="SIR_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2423 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="416.1649169921875" calculatedMassToCharge="416.161376953125" peptide_ref="Pep_DENYYQ" rank="1" passThreshold="true" id="SII_2_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2424 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10076_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2425 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17687_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2426 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39009_DENYYQ_496"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2512 <PeptideEvidenceRef peptideEvidence_ref="PepEv_87986_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2514 <PeptideEvidenceRef peptideEvidence_ref="PepEv_103789_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2522 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2523 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2526 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="526.192138671875" calculatedMassToCharge="525.7091064453125" peptide_ref="Pep_EEEKEEEE" rank="1" passThreshold="true" id="SII_3_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2527 <PeptideEvidenceRef peptideEvidence_ref="PepEv_60889_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2528 <PeptideEvidenceRef peptideEvidence_ref="PepEv_62142_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2529 <PeptideEvidenceRef peptideEvidence_ref="PepEv_90162_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2534 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2535 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2536 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2537 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2538 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2539 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2540 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=4" spectraData_ref="SID_1" id="SIR_67">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2541 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="405.6540222167969" calculatedMassToCharge="405.1672058105469" peptide_ref="Pep_TGNTSSDQ" rank="1" passThreshold="true" id="SII_67_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2542 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63047_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2543 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63902_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2544 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91169_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2545 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92024_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2546 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2547 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="24"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2548 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0019735042"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2549 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="77.246895"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2550 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2551 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2552 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2553 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2554 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2555 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2556 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1199 experiment=3" spectraData_ref="SID_1" id="SIR_20">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2557 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="495.1852722167969" calculatedMassToCharge="495.1980895996094" peptide_ref="Pep_YNCDKMIC" rank="1" passThreshold="true" id="SII_20_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2558 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23963_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2559 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46428_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2560 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2561 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2562 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0025026577"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2563 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="97.95903"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2564 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2565 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2566 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2567 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2568 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2569 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="495.1852722167969" calculatedMassToCharge="494.6878967285156" peptide_ref="Pep_CGDCKFNVC" rank="2" passThreshold="true" id="SII_20_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2570 <PeptideEvidenceRef peptideEvidence_ref="PepEv_7131_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2571 <PeptideEvidenceRef peptideEvidence_ref="PepEv_7986_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2572 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35253_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2573 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36108_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2574 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2575 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2576 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0025026577"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2577 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="98.46456"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2578 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2579 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2580 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2581 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2582 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2583 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2584 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=2" spectraData_ref="SID_1" id="SIR_90">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2585 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="522.6893920898438" calculatedMassToCharge="522.6652221679688" peptide_ref="Pep_PRALAVAVLCTLILL" rank="1" passThreshold="true" id="SII_90_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2586 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79033_PRALAVAVLCTLILL_197"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2587 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79240_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2588 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79447_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2589 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79654_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2590 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79832_PRALAVAVLCTLILL_161"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2591 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101180_PRALAVAVLCTLILL_198"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2592 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2593 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="65"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2594 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0051770797"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2595 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="208.82787"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2596 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2597 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2598 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2599 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2600 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2601 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2602 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1188 experiment=2" spectraData_ref="SID_1" id="SIR_5">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2603 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="489.1662292480469" calculatedMassToCharge="489.1896667480469" peptide_ref="Pep_CTNFSSCWSDGKM" rank="1" passThreshold="true" id="SII_5_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2604 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9796_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2605 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17407_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2606 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38729_CTNFSSCWSDGKM_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2607 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-61"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2608 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2609 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0058590886"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2610 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="234.54517"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2611 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2612 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2613 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2614 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2615 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2616 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2617 </SpectrumIdentificationList>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2618 </AnalysisData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2619 </DataCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2620 </MzIdentML>