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comparison test-data/201208-378803-msgf-50ppm-semitryptic-no_mods.mzid @ 0:ee56530a559f draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
author galaxyp
date Sun, 21 Feb 2016 11:04:06 -0500
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-1:000000000000 0:ee56530a559f
1 <?xml version="1.0" encoding="UTF-8"?>
2 <MzIdentML id="MS-GF+" version="1.1.0" xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2015-11-09T22:46:41" >
3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
4 <cv id="PSI-MS" uri="http://psidev.cvs.sourceforge.net/viewvc/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo" version="3.30.0" fullName="PSI-MS"/>
5 <cv id="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" fullName="UNIMOD"/>
6 <cv id="UO" uri="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo" fullName="UNIT-ONTOLOGY"/>
7 </cvList>
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10 <SoftwareName>
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12 </SoftwareName>
13 </AnalysisSoftware>
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185 </DBSequence>
186 <DBSequence accession="gi|28849955|ref|NP_788795.1|" searchDatabase_ref="SearchDB_1" length="375" id="DBSeq38138">
187 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|28849955|ref|NP_788795.1| pregnancy-associated glycoprotein 12 precursor [Bos taurus]" name="protein description"/>
188 </DBSequence>
189 <DBSequence accession="gi|119924469|ref|XP_001252524.1|" searchDatabase_ref="SearchDB_1" length="376" id="DBSeq49478">
190 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|119924469|ref|XP_001252524.1| PREDICTED: pregnancy-associated glycoprotein 2-like [Bos taurus]" name="protein description"/>
191 </DBSequence>
192 <DBSequence accession="XXX_gi|528993971|ref|XP_005219929.1|" searchDatabase_ref="SearchDB_1" length="768" id="DBSeq87068"/>
193 <DBSequence accession="XXX_gi|528993973|ref|XP_005219930.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq87837"/>
194 <DBSequence accession="XXX_gi|528993975|ref|XP_005219931.1|" searchDatabase_ref="SearchDB_1" length="685" id="DBSeq88550"/>
195 <DBSequence accession="XXX_gi|27806851|ref|NP_776358.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq103640"/>
196 <DBSequence accession="XXX_gi|528953234|ref|XP_005208080.1|" searchDatabase_ref="SearchDB_1" length="213" id="DBSeq78837"/>
197 <DBSequence accession="XXX_gi|528953236|ref|XP_005208081.1|" searchDatabase_ref="SearchDB_1" length="206" id="DBSeq79051"/>
198 <DBSequence accession="XXX_gi|528953238|ref|XP_005208082.1|" searchDatabase_ref="SearchDB_1" length="206" id="DBSeq79258"/>
199 <DBSequence accession="XXX_gi|528953240|ref|XP_005208083.1|" searchDatabase_ref="SearchDB_1" length="206" id="DBSeq79465"/>
200 <DBSequence accession="XXX_gi|528953246|ref|XP_005208086.1|" searchDatabase_ref="SearchDB_1" length="177" id="DBSeq79672"/>
201 <DBSequence accession="XXX_gi|30794348|ref|NP_851372.1|" searchDatabase_ref="SearchDB_1" length="214" id="DBSeq100983"/>
202 <Peptide id="Pep1">
203 <PeptideSequence>ISELFDKLDSMSVDK</PeptideSequence>
204 </Peptide>
205 <Peptide id="Pep2">
206 <PeptideSequence>PKNDPKLKTQGK</PeptideSequence>
207 </Peptide>
208 <Peptide id="Pep3">
209 <PeptideSequence>EPISVSSQQMLK</PeptideSequence>
210 </Peptide>
211 <Peptide id="Pep4">
212 <PeptideSequence>VWGFKVAGAQDEGK</PeptideSequence>
213 </Peptide>
214 <Peptide id="Pep5">
215 <PeptideSequence>PTAEFQDR</PeptideSequence>
216 </Peptide>
217 <Peptide id="Pep6">
218 <PeptideSequence>TVMENFVAFVDK</PeptideSequence>
219 </Peptide>
220 <Peptide id="Pep7">
221 <PeptideSequence>ESRCSRESRCSR</PeptideSequence>
222 </Peptide>
223 <Peptide id="Pep8">
224 <PeptideSequence>ACCEELTAEYEKALR</PeptideSequence>
225 </Peptide>
226 <Peptide id="Pep9">
227 <PeptideSequence>EVEDEGFLR</PeptideSequence>
228 </Peptide>
229 <Peptide id="Pep10">
230 <PeptideSequence>MHQIYVQCAKL</PeptideSequence>
231 </Peptide>
232 <Peptide id="Pep11">
233 <PeptideSequence>KKYMRWMNHKKSR</PeptideSequence>
234 </Peptide>
235 <Peptide id="Pep12">
236 <PeptideSequence>LAEAEKEGR</PeptideSequence>
237 </Peptide>
238 <Peptide id="Pep13">
239 <PeptideSequence>AEMFEHLSEK</PeptideSequence>
240 </Peptide>
241 <Peptide id="Pep14">
242 <PeptideSequence>SFNQEPQYR</PeptideSequence>
243 </Peptide>
244 <Peptide id="Pep15">
245 <PeptideSequence>SKVNNYFWELSQTR</PeptideSequence>
246 </Peptide>
247 <Peptide id="Pep16">
248 <PeptideSequence>PNTEPTHHFI</PeptideSequence>
249 </Peptide>
250 <Peptide id="Pep17">
251 <PeptideSequence>EGVAICKAGFR</PeptideSequence>
252 </Peptide>
253 <Peptide id="Pep18">
254 <PeptideSequence>QLEDILVLAK</PeptideSequence>
255 </Peptide>
256 <Peptide id="Pep19">
257 <PeptideSequence>AAQGALQPSL</PeptideSequence>
258 </Peptide>
259 <Peptide id="Pep20">
260 <PeptideSequence>VNPVTALTLLEKMK</PeptideSequence>
261 </Peptide>
262 <Peptide id="Pep21">
263 <PeptideSequence>FEIWVELLKYLEEIRGK</PeptideSequence>
264 </Peptide>
265 <Peptide id="Pep22">
266 <PeptideSequence>TIFDTEIESTSPK</PeptideSequence>
267 </Peptide>
268 <Peptide id="Pep23">
269 <PeptideSequence>DTNIQICR</PeptideSequence>
270 </Peptide>
271 <Peptide id="Pep24">
272 <PeptideSequence>QLEGRLQDLR</PeptideSequence>
273 </Peptide>
274 <Peptide id="Pep25">
275 <PeptideSequence>RAFQECER</PeptideSequence>
276 </Peptide>
277 <Peptide id="Pep26">
278 <PeptideSequence>LECTNLYR</PeptideSequence>
279 </Peptide>
280 <Peptide id="Pep27">
281 <PeptideSequence>LMLLSRDDSGSGSK</PeptideSequence>
282 </Peptide>
283 <Peptide id="Pep28">
284 <PeptideSequence>ATEGTQLFNDYCEQ</PeptideSequence>
285 </Peptide>
286 <Peptide id="Pep29">
287 <PeptideSequence>IQNGALNCEEKLTLAK</PeptideSequence>
288 </Peptide>
289 <Peptide id="Pep30">
290 <PeptideSequence>CVCDECGRGFGFK</PeptideSequence>
291 </Peptide>
292 <Peptide id="Pep31">
293 <PeptideSequence>RMMESRQR</PeptideSequence>
294 </Peptide>
295 <Peptide id="Pep32">
296 <PeptideSequence>RSDVEQLDQEIK</PeptideSequence>
297 </Peptide>
298 <Peptide id="Pep33">
299 <PeptideSequence>WQEYQSRVD</PeptideSequence>
300 </Peptide>
301 <Peptide id="Pep34">
302 <PeptideSequence>RKFIIHRGKRKAAQ</PeptideSequence>
303 </Peptide>
304 <Peptide id="Pep35">
305 <PeptideSequence>VKDIVNLTDVNP</PeptideSequence>
306 </Peptide>
307 <Peptide id="Pep36">
308 <PeptideSequence>KELVDQRYDK</PeptideSequence>
309 </Peptide>
310 <Peptide id="Pep37">
311 <PeptideSequence>QNIDRCYPER</PeptideSequence>
312 </Peptide>
313 <Peptide id="Pep38">
314 <PeptideSequence>QLAQQTEQKGCR</PeptideSequence>
315 </Peptide>
316 <Peptide id="Pep39">
317 <PeptideSequence>IFELEEH</PeptideSequence>
318 </Peptide>
319 <Peptide id="Pep40">
320 <PeptideSequence>VFEEMIEPYCLHESCK</PeptideSequence>
321 </Peptide>
322 <Peptide id="Pep41">
323 <PeptideSequence>GLRFDWSLR</PeptideSequence>
324 </Peptide>
325 <Peptide id="Pep42">
326 <PeptideSequence>VLETLGINKRKIVNQLSNSLTR</PeptideSequence>
327 </Peptide>
328 <Peptide id="Pep43">
329 <PeptideSequence>DPDNSIELE</PeptideSequence>
330 </Peptide>
331 <Peptide id="Pep44">
332 <PeptideSequence>LIIQLEQGDEPWR</PeptideSequence>
333 </Peptide>
334 <Peptide id="Pep45">
335 <PeptideSequence>DPAPEGEIEMLDHAVK</PeptideSequence>
336 </Peptide>
337 <Peptide id="Pep46">
338 <PeptideSequence>EVMEHR</PeptideSequence>
339 </Peptide>
340 <Peptide id="Pep47">
341 <PeptideSequence>YNKCVDK</PeptideSequence>
342 </Peptide>
343 <Peptide id="Pep48">
344 <PeptideSequence>GFGRGCER</PeptideSequence>
345 </Peptide>
346 <Peptide id="Pep49">
347 <PeptideSequence>QLAQKYNCDK</PeptideSequence>
348 </Peptide>
349 <Peptide id="Pep50">
350 <PeptideSequence>DLGEEHF</PeptideSequence>
351 </Peptide>
352 <Peptide id="Pep51">
353 <PeptideSequence>DLPFLSNEYK</PeptideSequence>
354 </Peptide>
355 <Peptide id="Pep52">
356 <PeptideSequence>DAHQKELVDQRYDK</PeptideSequence>
357 </Peptide>
358 <Peptide id="Pep53">
359 <PeptideSequence>QLQEELAEHQ</PeptideSequence>
360 </Peptide>
361 <Peptide id="Pep54">
362 <PeptideSequence>DAENTVRGR</PeptideSequence>
363 </Peptide>
364 <Peptide id="Pep55">
365 <PeptideSequence>LNKDEVVTVDEAK</PeptideSequence>
366 </Peptide>
367 <Peptide id="Pep56">
368 <PeptideSequence>LSETEMR</PeptideSequence>
369 </Peptide>
370 <Peptide id="Pep57">
371 <PeptideSequence>DELVCEDNK</PeptideSequence>
372 </Peptide>
373 <Peptide id="Pep58">
374 <PeptideSequence>CIMKDCNYKQ</PeptideSequence>
375 </Peptide>
376 <Peptide id="Pep59">
377 <PeptideSequence>ALDARDDACELLDGHCCEKHVK</PeptideSequence>
378 </Peptide>
379 <Peptide id="Pep60">
380 <PeptideSequence>FGYEEQSLGFSQK</PeptideSequence>
381 </Peptide>
382 <Peptide id="Pep61">
383 <PeptideSequence>AQQCVCCVWVK</PeptideSequence>
384 </Peptide>
385 <Peptide id="Pep62">
386 <PeptideSequence>FFNPDDE</PeptideSequence>
387 </Peptide>
388 <Peptide id="Pep63">
389 <PeptideSequence>HAAEEEIY</PeptideSequence>
390 </Peptide>
391 <Peptide id="Pep64">
392 <PeptideSequence>ESRELWNEF</PeptideSequence>
393 </Peptide>
394 <Peptide id="Pep65">
395 <PeptideSequence>MPPLIPAEVDK</PeptideSequence>
396 </Peptide>
397 <Peptide id="Pep66">
398 <PeptideSequence>YYKVDE</PeptideSequence>
399 </Peptide>
400 <Peptide id="Pep67">
401 <PeptideSequence>MMSASSYNE</PeptideSequence>
402 </Peptide>
403 <Peptide id="Pep68">
404 <PeptideSequence>LMHDPSR</PeptideSequence>
405 </Peptide>
406 <Peptide id="Pep69">
407 <PeptideSequence>YDGLVEQ</PeptideSequence>
408 </Peptide>
409 <Peptide id="Pep70">
410 <PeptideSequence>RCYPER</PeptideSequence>
411 </Peptide>
412 <Peptide id="Pep71">
413 <PeptideSequence>ARGCSEELS</PeptideSequence>
414 </Peptide>
415 <Peptide id="Pep72">
416 <PeptideSequence>AMFEELSSLK</PeptideSequence>
417 </Peptide>
418 <Peptide id="Pep73">
419 <PeptideSequence>LIRRQRLRPR</PeptideSequence>
420 </Peptide>
421 <Peptide id="Pep74">
422 <PeptideSequence>CDDQNKR</PeptideSequence>
423 </Peptide>
424 <Peptide id="Pep75">
425 <PeptideSequence>EACFAVEGP</PeptideSequence>
426 </Peptide>
427 <Peptide id="Pep76">
428 <PeptideSequence>SKEVSNLEFSDR</PeptideSequence>
429 </Peptide>
430 <Peptide id="Pep77">
431 <PeptideSequence>EKTGNTSSDQ</PeptideSequence>
432 </Peptide>
433 <Peptide id="Pep78">
434 <PeptideSequence>WGLDMERAGGQK</PeptideSequence>
435 </Peptide>
436 <Peptide id="Pep79">
437 <PeptideSequence>EGQMVEEKYQK</PeptideSequence>
438 </Peptide>
439 <Peptide id="Pep80">
440 <PeptideSequence>NTPDVMMSDTEK</PeptideSequence>
441 </Peptide>
442 <Peptide id="Pep81">
443 <PeptideSequence>KECGAHSEDAVCTK</PeptideSequence>
444 </Peptide>
445 <Peptide id="Pep82">
446 <PeptideSequence>PDIGDPNWISGDSE</PeptideSequence>
447 </Peptide>
448 <Peptide id="Pep83">
449 <PeptideSequence>ELNPEEGQMVEEKYQ</PeptideSequence>
450 </Peptide>
451 <Peptide id="Pep84">
452 <PeptideSequence>NQDALTFFNSNQVS</PeptideSequence>
453 </Peptide>
454 <Peptide id="Pep85">
455 <PeptideSequence>DERDAAAESYHR</PeptideSequence>
456 </Peptide>
457 <Peptide id="Pep86">
458 <PeptideSequence>QSFGLSQEEYGFDGA</PeptideSequence>
459 </Peptide>
460 <Peptide id="Pep87">
461 <PeptideSequence>NCNGSAACGLGYDFSR</PeptideSequence>
462 </Peptide>
463 <Peptide id="Pep88">
464 <PeptideSequence>THKMYEAD</PeptideSequence>
465 </Peptide>
466 <Peptide id="Pep89">
467 <PeptideSequence>AEDEPEWPQ</PeptideSequence>
468 </Peptide>
469 <Peptide id="Pep90">
470 <PeptideSequence>TEGPTYETER</PeptideSequence>
471 </Peptide>
472 <Peptide id="Pep91">
473 <PeptideSequence>ASINPNNDSWDYALEE</PeptideSequence>
474 </Peptide>
475 <Peptide id="Pep92">
476 <PeptideSequence>KQEESAEAGAPG</PeptideSequence>
477 </Peptide>
478 <Peptide id="Pep93">
479 <PeptideSequence>PFVCLECGR</PeptideSequence>
480 </Peptide>
481 <Peptide id="Pep94">
482 <PeptideSequence>ENLEQAFE</PeptideSequence>
483 </Peptide>
484 <Peptide id="Pep95">
485 <PeptideSequence>HYCGKCCL</PeptideSequence>
486 </Peptide>
487 <Peptide id="Pep96">
488 <PeptideSequence>WDFDEES</PeptideSequence>
489 </Peptide>
490 <Peptide id="Pep97">
491 <PeptideSequence>PPGAQGAEGGGSAEG</PeptideSequence>
492 </Peptide>
493 <Peptide id="Pep98">
494 <PeptideSequence>NQQPSLDQAHES</PeptideSequence>
495 </Peptide>
496 <Peptide id="Pep99">
497 <PeptideSequence>EGDYVSR</PeptideSequence>
498 </Peptide>
499 <Peptide id="Pep100">
500 <PeptideSequence>EEDASSCQEQ</PeptideSequence>
501 </Peptide>
502 <Peptide id="Pep101">
503 <PeptideSequence>DENYYQ</PeptideSequence>
504 </Peptide>
505 <Peptide id="Pep102">
506 <PeptideSequence>ESEGKGCSMEAPQ</PeptideSequence>
507 </Peptide>
508 <Peptide id="Pep103">
509 <PeptideSequence>GEVAFCAEKDDAACCK</PeptideSequence>
510 </Peptide>
511 <Peptide id="Pep104">
512 <PeptideSequence>MCNFHYQG</PeptideSequence>
513 </Peptide>
514 <Peptide id="Pep105">
515 <PeptideSequence>HGRDWF</PeptideSequence>
516 </Peptide>
517 <Peptide id="Pep106">
518 <PeptideSequence>EDLVPWIEDCK</PeptideSequence>
519 </Peptide>
520 <Peptide id="Pep107">
521 <PeptideSequence>MGHDRCR</PeptideSequence>
522 </Peptide>
523 <Peptide id="Pep108">
524 <PeptideSequence>EEEKEEEE</PeptideSequence>
525 </Peptide>
526 <Peptide id="Pep109">
527 <PeptideSequence>TGNTSSDQ</PeptideSequence>
528 </Peptide>
529 <Peptide id="Pep110">
530 <PeptideSequence>CGDCKFNVC</PeptideSequence>
531 </Peptide>
532 <Peptide id="Pep111">
533 <PeptideSequence>YNCDKMIC</PeptideSequence>
534 </Peptide>
535 <Peptide id="Pep112">
536 <PeptideSequence>PRALAVAVLCTLILL</PeptideSequence>
537 </Peptide>
538 <Peptide id="Pep113">
539 <PeptideSequence>CTNFSSCWSDGKM</PeptideSequence>
540 </Peptide>
541 <PeptideEvidence isDecoy="true" post="I" pre="R" end="621" start="607" peptide_ref="Pep1" dBSequence_ref="DBSeq83632" id="PepEv_84238_1_607"/>
542 <PeptideEvidence isDecoy="true" post="I" pre="R" end="617" start="603" peptide_ref="Pep1" dBSequence_ref="DBSeq84448" id="PepEv_85050_1_603"/>
543 <PeptideEvidence isDecoy="true" post="I" pre="R" end="572" start="558" peptide_ref="Pep1" dBSequence_ref="DBSeq85260" id="PepEv_85817_1_558"/>
544 <PeptideEvidence isDecoy="true" post="I" pre="R" end="432" start="418" peptide_ref="Pep1" dBSequence_ref="DBSeq93486" id="PepEv_93903_1_418"/>
545 <PeptideEvidence isDecoy="false" post="C" pre="F" end="329" start="318" peptide_ref="Pep2" dBSequence_ref="DBSeq31093" id="PepEv_31410_2_318"/>
546 <PeptideEvidence isDecoy="false" post="C" pre="F" end="273" start="262" peptide_ref="Pep2" dBSequence_ref="DBSeq31862" id="PepEv_32123_2_262"/>
547 <PeptideEvidence isDecoy="false" post="C" pre="F" end="246" start="235" peptide_ref="Pep2" dBSequence_ref="DBSeq32575" id="PepEv_32809_2_235"/>
548 <PeptideEvidence isDecoy="false" post="C" pre="F" end="273" start="262" peptide_ref="Pep2" dBSequence_ref="DBSeq47665" id="PepEv_47926_2_262"/>
549 <PeptideEvidence isDecoy="false" post="F" pre="K" end="224" start="213" peptide_ref="Pep3" dBSequence_ref="DBSeq46845" id="PepEv_47057_3_213"/>
550 <PeptideEvidence isDecoy="true" post="N" pre="K" end="933" start="920" peptide_ref="Pep4" dBSequence_ref="DBSeq104353" id="PepEv_105272_4_920"/>
551 <PeptideEvidence isDecoy="true" post="N" pre="K" end="965" start="952" peptide_ref="Pep4" dBSequence_ref="DBSeq107227" id="PepEv_108178_4_952"/>
552 <PeptideEvidence isDecoy="true" post="N" pre="K" end="933" start="920" peptide_ref="Pep4" dBSequence_ref="DBSeq108359" id="PepEv_109278_4_920"/>
553 <PeptideEvidence isDecoy="true" post="N" pre="K" end="933" start="920" peptide_ref="Pep4" dBSequence_ref="DBSeq109459" id="PepEv_110378_4_920"/>
554 <PeptideEvidence isDecoy="false" post="I" pre="V" end="496" start="489" peptide_ref="Pep5" dBSequence_ref="DBSeq47106" id="PepEv_47594_5_489"/>
555 <PeptideEvidence isDecoy="false" post="C" pre="K" end="580" start="569" peptide_ref="Pep6" dBSequence_ref="DBSeq43937" id="PepEv_44505_6_569"/>
556 <PeptideEvidence isDecoy="true" post="E" pre="R" end="7523" start="7512" peptide_ref="Pep7" dBSequence_ref="DBSeq65480" id="PepEv_72991_7_7512"/>
557 <PeptideEvidence isDecoy="true" post="E" pre="R" end="5411" start="5400" peptide_ref="Pep7" dBSequence_ref="DBSeq73091" id="PepEv_78490_7_5400"/>
558 <PeptideEvidence isDecoy="true" post="E" pre="R" end="5411" start="5400" peptide_ref="Pep7" dBSequence_ref="DBSeq94489" id="PepEv_99888_7_5400"/>
559 <PeptideEvidence isDecoy="true" post="L" pre="K" end="237" start="223" peptide_ref="Pep8" dBSequence_ref="DBSeq99912" id="PepEv_100134_8_223"/>
560 <PeptideEvidence isDecoy="true" post="A" pre="V" end="2003" start="1995" peptide_ref="Pep9" dBSequence_ref="DBSeq65480" id="PepEv_67474_9_1995"/>
561 <PeptideEvidence isDecoy="true" post="A" pre="V" end="1933" start="1925" peptide_ref="Pep9" dBSequence_ref="DBSeq73091" id="PepEv_75015_9_1925"/>
562 <PeptideEvidence isDecoy="true" post="A" pre="V" end="1933" start="1925" peptide_ref="Pep9" dBSequence_ref="DBSeq94489" id="PepEv_96413_9_1925"/>
563 <PeptideEvidence isDecoy="true" post="S" pre="R" end="49" start="39" peptide_ref="Pep10" dBSequence_ref="DBSeq60575" id="PepEv_60613_10_39"/>
564 <PeptideEvidence isDecoy="true" post="S" pre="R" end="49" start="39" peptide_ref="Pep10" dBSequence_ref="DBSeq61828" id="PepEv_61866_10_39"/>
565 <PeptideEvidence isDecoy="true" post="S" pre="R" end="49" start="39" peptide_ref="Pep10" dBSequence_ref="DBSeq89848" id="PepEv_89886_10_39"/>
566 <PeptideEvidence isDecoy="false" post="V" pre="R" end="7201" start="7189" peptide_ref="Pep11" dBSequence_ref="DBSeq9505" id="PepEv_16693_11_7189"/>
567 <PeptideEvidence isDecoy="false" post="V" pre="R" end="5155" start="5143" peptide_ref="Pep11" dBSequence_ref="DBSeq17116" id="PepEv_22258_11_5143"/>
568 <PeptideEvidence isDecoy="false" post="V" pre="R" end="5079" start="5067" peptide_ref="Pep11" dBSequence_ref="DBSeq38514" id="PepEv_43580_11_5067"/>
569 <PeptideEvidence isDecoy="false" post="L" pre="T" end="2686" start="2678" peptide_ref="Pep12" dBSequence_ref="DBSeq9505" id="PepEv_12182_12_2678"/>
570 <PeptideEvidence isDecoy="false" post="L" pre="Q" end="4275" start="4266" peptide_ref="Pep13" dBSequence_ref="DBSeq9505" id="PepEv_13770_13_4266"/>
571 <PeptideEvidence isDecoy="false" post="L" pre="Q" end="2233" start="2224" peptide_ref="Pep13" dBSequence_ref="DBSeq17116" id="PepEv_19339_13_2224"/>
572 <PeptideEvidence isDecoy="false" post="L" pre="Q" end="2157" start="2148" peptide_ref="Pep13" dBSequence_ref="DBSeq38514" id="PepEv_40661_13_2148"/>
573 <PeptideEvidence isDecoy="true" post="L" pre="K" end="198" start="190" peptide_ref="Pep14" dBSequence_ref="DBSeq92858" id="PepEv_93047_14_190"/>
574 <PeptideEvidence isDecoy="true" post="L" pre="R" end="741" start="728" peptide_ref="Pep15" dBSequence_ref="DBSeq63026" id="PepEv_63753_15_728"/>
575 <PeptideEvidence isDecoy="true" post="L" pre="R" end="741" start="728" peptide_ref="Pep15" dBSequence_ref="DBSeq63881" id="PepEv_64608_15_728"/>
576 <PeptideEvidence isDecoy="true" post="L" pre="R" end="741" start="728" peptide_ref="Pep15" dBSequence_ref="DBSeq91148" id="PepEv_91875_15_728"/>
577 <PeptideEvidence isDecoy="true" post="L" pre="R" end="741" start="728" peptide_ref="Pep15" dBSequence_ref="DBSeq92003" id="PepEv_92730_15_728"/>
578 <PeptideEvidence isDecoy="false" post="H" pre="R" end="469" start="460" peptide_ref="Pep16" dBSequence_ref="DBSeq8761" id="PepEv_9220_16_460"/>
579 <PeptideEvidence isDecoy="true" post="H" pre="S" end="237" start="227" peptide_ref="Pep17" dBSequence_ref="DBSeq103081" id="PepEv_103307_17_227"/>
580 <PeptideEvidence isDecoy="false" post="Q" pre="K" end="5499" start="5490" peptide_ref="Pep18" dBSequence_ref="DBSeq9505" id="PepEv_14994_18_5490"/>
581 <PeptideEvidence isDecoy="false" post="Q" pre="K" end="3457" start="3448" peptide_ref="Pep18" dBSequence_ref="DBSeq17116" id="PepEv_20563_18_3448"/>
582 <PeptideEvidence isDecoy="false" post="Q" pre="K" end="3381" start="3372" peptide_ref="Pep18" dBSequence_ref="DBSeq38514" id="PepEv_41885_18_3372"/>
583 <PeptideEvidence isDecoy="false" post="Y" pre="K" end="1039" start="1030" peptide_ref="Pep19" dBSequence_ref="DBSeq4600" id="PepEv_5629_19_1030"/>
584 <PeptideEvidence isDecoy="false" post="Y" pre="K" end="984" start="975" peptide_ref="Pep19" dBSequence_ref="DBSeq5853" id="PepEv_6827_19_975"/>
585 <PeptideEvidence isDecoy="false" post="Y" pre="K" end="1086" start="1077" peptide_ref="Pep19" dBSequence_ref="DBSeq33873" id="PepEv_34949_19_1077"/>
586 <PeptideEvidence isDecoy="false" post="D" pre="R" end="772" start="759" peptide_ref="Pep20" dBSequence_ref="DBSeq28473" id="PepEv_29231_20_759"/>
587 <PeptideEvidence isDecoy="true" post="E" pre="G" end="7164" start="7148" peptide_ref="Pep21" dBSequence_ref="DBSeq65480" id="PepEv_72627_21_7148"/>
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699 <PeptideEvidence isDecoy="false" post="V" pre="K" end="4098" start="4089" peptide_ref="Pep53" dBSequence_ref="DBSeq9505" id="PepEv_13593_53_4089"/>
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722 <PeptideEvidence isDecoy="true" post="E" pre="K" end="3604" start="3596" peptide_ref="Pep64" dBSequence_ref="DBSeq73091" id="PepEv_76686_64_3596"/>
723 <PeptideEvidence isDecoy="true" post="E" pre="K" end="3604" start="3596" peptide_ref="Pep64" dBSequence_ref="DBSeq94489" id="PepEv_98084_64_3596"/>
724 <PeptideEvidence isDecoy="false" post="I" pre="R" end="6078" start="6068" peptide_ref="Pep65" dBSequence_ref="DBSeq9505" id="PepEv_15572_65_6068"/>
725 <PeptideEvidence isDecoy="false" post="I" pre="R" end="4036" start="4026" peptide_ref="Pep65" dBSequence_ref="DBSeq17116" id="PepEv_21141_65_4026"/>
726 <PeptideEvidence isDecoy="false" post="I" pre="R" end="3960" start="3950" peptide_ref="Pep65" dBSequence_ref="DBSeq38514" id="PepEv_42463_65_3950"/>
727 <PeptideEvidence isDecoy="false" post="N" pre="K" end="110" start="105" peptide_ref="Pep66" dBSequence_ref="DBSeq30052" id="PepEv_30156_66_105"/>
728 <PeptideEvidence isDecoy="false" post="N" pre="K" end="110" start="105" peptide_ref="Pep66" dBSequence_ref="DBSeq44851" id="PepEv_44955_66_105"/>
729 <PeptideEvidence isDecoy="false" post="D" pre="R" end="480" start="472" peptide_ref="Pep67" dBSequence_ref="DBSeq8761" id="PepEv_9232_67_472"/>
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731 <PeptideEvidence isDecoy="true" post="P" pre="K" end="4562" start="4556" peptide_ref="Pep68" dBSequence_ref="DBSeq73091" id="PepEv_77646_68_4556"/>
732 <PeptideEvidence isDecoy="true" post="P" pre="K" end="4562" start="4556" peptide_ref="Pep68" dBSequence_ref="DBSeq94489" id="PepEv_99044_68_4556"/>
733 <PeptideEvidence isDecoy="true" post="I" pre="R" end="6259" start="6253" peptide_ref="Pep69" dBSequence_ref="DBSeq65480" id="PepEv_71732_69_6253"/>
734 <PeptideEvidence isDecoy="true" post="I" pre="R" end="4149" start="4143" peptide_ref="Pep69" dBSequence_ref="DBSeq73091" id="PepEv_77233_69_4143"/>
735 <PeptideEvidence isDecoy="true" post="I" pre="R" end="4149" start="4143" peptide_ref="Pep69" dBSequence_ref="DBSeq94489" id="PepEv_98631_69_4143"/>
736 <PeptideEvidence isDecoy="true" post="Q" pre="D" end="20" start="15" peptide_ref="Pep70" dBSequence_ref="DBSeq105830" id="PepEv_105844_70_15"/>
737 <PeptideEvidence isDecoy="true" post="Q" pre="D" end="20" start="15" peptide_ref="Pep70" dBSequence_ref="DBSeq106550" id="PepEv_106564_70_15"/>
738 <PeptideEvidence isDecoy="true" post="Q" pre="D" end="20" start="15" peptide_ref="Pep70" dBSequence_ref="DBSeq110897" id="PepEv_110911_70_15"/>
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740 <PeptideEvidence isDecoy="false" post="K" pre="R" end="533" start="525" peptide_ref="Pep71" dBSequence_ref="DBSeq7906" id="PepEv_8430_71_525"/>
741 <PeptideEvidence isDecoy="false" post="K" pre="R" end="533" start="525" peptide_ref="Pep71" dBSequence_ref="DBSeq35173" id="PepEv_35697_71_525"/>
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744 <PeptideEvidence isDecoy="true" post="G" pre="A" end="953" start="944" peptide_ref="Pep72" dBSequence_ref="DBSeq61828" id="PepEv_62771_72_944"/>
745 <PeptideEvidence isDecoy="true" post="G" pre="A" end="954" start="945" peptide_ref="Pep72" dBSequence_ref="DBSeq89848" id="PepEv_90792_72_945"/>
746 <PeptideEvidence isDecoy="false" post="E" pre="K" end="22" start="13" peptide_ref="Pep73" dBSequence_ref="DBSeq36883" id="PepEv_36895_73_13"/>
747 <PeptideEvidence isDecoy="false" post="S" pre="E" end="2937" start="2931" peptide_ref="Pep74" dBSequence_ref="DBSeq9505" id="PepEv_12435_74_2931"/>
748 <PeptideEvidence isDecoy="false" post="K" pre="K" end="596" start="588" peptide_ref="Pep75" dBSequence_ref="DBSeq43937" id="PepEv_44524_75_588"/>
749 <PeptideEvidence isDecoy="false" post="K" pre="G" end="3265" start="3254" peptide_ref="Pep76" dBSequence_ref="DBSeq9505" id="PepEv_12758_76_3254"/>
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751 <PeptideEvidence isDecoy="true" post="L" pre="R" end="29" start="20" peptide_ref="Pep77" dBSequence_ref="DBSeq63881" id="PepEv_63900_77_20"/>
752 <PeptideEvidence isDecoy="true" post="L" pre="R" end="29" start="20" peptide_ref="Pep77" dBSequence_ref="DBSeq91148" id="PepEv_91167_77_20"/>
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758 <PeptideEvidence isDecoy="false" post="A" pre="E" end="3974" start="3964" peptide_ref="Pep79" dBSequence_ref="DBSeq17116" id="PepEv_21079_79_3964"/>
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761 <PeptideEvidence isDecoy="true" post="L" pre="D" end="812" start="801" peptide_ref="Pep80" dBSequence_ref="DBSeq107227" id="PepEv_108027_80_801"/>
762 <PeptideEvidence isDecoy="true" post="L" pre="D" end="812" start="801" peptide_ref="Pep80" dBSequence_ref="DBSeq108359" id="PepEv_109159_80_801"/>
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764 <PeptideEvidence isDecoy="true" post="A" pre="S" end="533" start="520" peptide_ref="Pep81" dBSequence_ref="DBSeq99912" id="PepEv_100431_81_520"/>
765 <PeptideEvidence isDecoy="true" post="G" pre="K" end="227" start="214" peptide_ref="Pep82" dBSequence_ref="DBSeq103081" id="PepEv_103294_82_214"/>
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768 <PeptideEvidence isDecoy="false" post="K" pre="K" end="3897" start="3883" peptide_ref="Pep83" dBSequence_ref="DBSeq38514" id="PepEv_42396_83_3883"/>
769 <PeptideEvidence isDecoy="false" post="E" pre="R" end="3148" start="3135" peptide_ref="Pep84" dBSequence_ref="DBSeq9505" id="PepEv_12639_84_3135"/>
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772 <PeptideEvidence isDecoy="false" post="P" pre="K" end="167" start="153" peptide_ref="Pep86" dBSequence_ref="DBSeq49478" id="PepEv_49630_86_153"/>
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780 <PeptideEvidence isDecoy="false" post="P" pre="R" end="264" start="256" peptide_ref="Pep89" dBSequence_ref="DBSeq7051" id="PepEv_7306_89_256"/>
781 <PeptideEvidence isDecoy="false" post="P" pre="R" end="264" start="256" peptide_ref="Pep89" dBSequence_ref="DBSeq7906" id="PepEv_8161_89_256"/>
782 <PeptideEvidence isDecoy="false" post="P" pre="R" end="264" start="256" peptide_ref="Pep89" dBSequence_ref="DBSeq35173" id="PepEv_35428_89_256"/>
783 <PeptideEvidence isDecoy="false" post="P" pre="R" end="264" start="256" peptide_ref="Pep89" dBSequence_ref="DBSeq36028" id="PepEv_36283_89_256"/>
784 <PeptideEvidence isDecoy="true" post="T" pre="G" end="5347" start="5338" peptide_ref="Pep90" dBSequence_ref="DBSeq65480" id="PepEv_70817_90_5338"/>
785 <PeptideEvidence isDecoy="true" post="E" pre="K" end="6833" start="6818" peptide_ref="Pep91" dBSequence_ref="DBSeq65480" id="PepEv_72297_91_6818"/>
786 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4721" start="4706" peptide_ref="Pep91" dBSequence_ref="DBSeq73091" id="PepEv_77796_91_4706"/>
787 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4721" start="4706" peptide_ref="Pep91" dBSequence_ref="DBSeq94489" id="PepEv_99194_91_4706"/>
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789 <PeptideEvidence isDecoy="false" post="G" pre="R" end="399" start="388" peptide_ref="Pep92" dBSequence_ref="DBSeq5853" id="PepEv_6240_92_388"/>
790 <PeptideEvidence isDecoy="false" post="G" pre="R" end="501" start="490" peptide_ref="Pep92" dBSequence_ref="DBSeq33873" id="PepEv_34362_92_490"/>
791 <PeptideEvidence isDecoy="false" post="G" pre="R" end="393" start="385" peptide_ref="Pep93" dBSequence_ref="DBSeq248" id="PepEv_632_93_385"/>
792 <PeptideEvidence isDecoy="false" post="G" pre="R" end="393" start="385" peptide_ref="Pep93" dBSequence_ref="DBSeq865" id="PepEv_1249_93_385"/>
793 <PeptideEvidence isDecoy="false" post="G" pre="R" end="393" start="385" peptide_ref="Pep93" dBSequence_ref="DBSeq1482" id="PepEv_1866_93_385"/>
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796 <PeptideEvidence isDecoy="false" post="G" pre="R" end="365" start="357" peptide_ref="Pep93" dBSequence_ref="DBSeq3312" id="PepEv_3668_93_357"/>
797 <PeptideEvidence isDecoy="false" post="G" pre="R" end="393" start="385" peptide_ref="Pep93" dBSequence_ref="DBSeq24004" id="PepEv_24388_93_385"/>
798 <PeptideEvidence isDecoy="false" post="G" pre="R" end="393" start="385" peptide_ref="Pep93" dBSequence_ref="DBSeq24621" id="PepEv_25005_93_385"/>
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801 <PeptideEvidence isDecoy="false" post="G" pre="R" end="373" start="365" peptide_ref="Pep93" dBSequence_ref="DBSeq26471" id="PepEv_26835_93_365"/>
802 <PeptideEvidence isDecoy="false" post="G" pre="R" end="365" start="357" peptide_ref="Pep93" dBSequence_ref="DBSeq27068" id="PepEv_27424_93_357"/>
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805 <PeptideEvidence isDecoy="false" post="V" pre="R" end="260" start="253" peptide_ref="Pep94" dBSequence_ref="DBSeq38514" id="PepEv_38766_94_253"/>
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807 <PeptideEvidence isDecoy="false" post="T" pre="R" end="146" start="139" peptide_ref="Pep95" dBSequence_ref="DBSeq44851" id="PepEv_44989_95_139"/>
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809 <PeptideEvidence isDecoy="true" post="D" pre="R" end="460" start="454" peptide_ref="Pep96" dBSequence_ref="DBSeq63881" id="PepEv_64334_96_454"/>
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811 <PeptideEvidence isDecoy="true" post="D" pre="R" end="460" start="454" peptide_ref="Pep96" dBSequence_ref="DBSeq92003" id="PepEv_92456_96_454"/>
812 <PeptideEvidence isDecoy="true" post="G" pre="K" end="386" start="372" peptide_ref="Pep97" dBSequence_ref="DBSeq105830" id="PepEv_106201_97_372"/>
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814 <PeptideEvidence isDecoy="true" post="G" pre="K" end="386" start="372" peptide_ref="Pep97" dBSequence_ref="DBSeq110897" id="PepEv_111268_97_372"/>
815 <PeptideEvidence isDecoy="true" post="I" pre="R" end="4003" start="3992" peptide_ref="Pep98" dBSequence_ref="DBSeq65480" id="PepEv_69471_98_3992"/>
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817 <PeptideEvidence isDecoy="true" post="L" pre="E" end="774" start="768" peptide_ref="Pep99" dBSequence_ref="DBSeq84448" id="PepEv_85215_99_768"/>
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820 <PeptideEvidence isDecoy="false" post="L" pre="R" end="4371" start="4362" peptide_ref="Pep100" dBSequence_ref="DBSeq9505" id="PepEv_13866_100_4362"/>
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826 <PeptideEvidence isDecoy="true" post="S" pre="K" end="4729" start="4717" peptide_ref="Pep102" dBSequence_ref="DBSeq65480" id="PepEv_70196_102_4717"/>
827 <PeptideEvidence isDecoy="true" post="D" pre="P" end="28" start="13" peptide_ref="Pep103" dBSequence_ref="DBSeq99912" id="PepEv_99924_103_13"/>
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829 <PeptideEvidence isDecoy="false" post="F" pre="K" end="74" start="67" peptide_ref="Pep104" dBSequence_ref="DBSeq28473" id="PepEv_28539_104_67"/>
830 <PeptideEvidence isDecoy="false" post="F" pre="K" end="74" start="67" peptide_ref="Pep104" dBSequence_ref="DBSeq29285" id="PepEv_29351_104_67"/>
831 <PeptideEvidence isDecoy="false" post="F" pre="K" end="74" start="67" peptide_ref="Pep104" dBSequence_ref="DBSeq37511" id="PepEv_37577_104_67"/>
832 <PeptideEvidence isDecoy="true" post="Y" pre="R" end="211" start="206" peptide_ref="Pep105" dBSequence_ref="DBSeq105830" id="PepEv_106035_105_206"/>
833 <PeptideEvidence isDecoy="true" post="Y" pre="R" end="211" start="206" peptide_ref="Pep105" dBSequence_ref="DBSeq106550" id="PepEv_106755_105_206"/>
834 <PeptideEvidence isDecoy="true" post="Y" pre="R" end="211" start="206" peptide_ref="Pep105" dBSequence_ref="DBSeq110897" id="PepEv_111102_105_206"/>
835 <PeptideEvidence isDecoy="false" post="A" pre="V" end="4971" start="4961" peptide_ref="Pep106" dBSequence_ref="DBSeq9505" id="PepEv_14465_106_4961"/>
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2590 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101180_112_198"/>
2591 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-53" name="MS-GF:RawScore"/>
2592 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="65" name="MS-GF:DeNovoScore"/>
2593 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0051770797" name="MS-GF:SpecEValue"/>
2594 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="208.82787" name="MS-GF:EValue"/>
2595 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
2596 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
2597 <userParam value="0" name="IsotopeError"/>
2598 <userParam value="HCD" name="AssumedDissociationMethod"/>
2599 </SpectrumIdentificationItem>
2600 </SpectrumIdentificationResult>
2601 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1188 experiment=2" id="SIR_5">
2602 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep113" calculatedMassToCharge="489.1896667480469" experimentalMassToCharge="489.1662292480469" chargeState="3" id="SII_5_1">
2603 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9796_113_292"/>
2604 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17407_113_292"/>
2605 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38729_113_216"/>
2606 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-61" name="MS-GF:RawScore"/>
2607 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="64" name="MS-GF:DeNovoScore"/>
2608 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0058590886" name="MS-GF:SpecEValue"/>
2609 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="234.54517" name="MS-GF:EValue"/>
2610 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
2611 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
2612 <userParam value="0" name="IsotopeError"/>
2613 <userParam value="HCD" name="AssumedDissociationMethod"/>
2614 </SpectrumIdentificationItem>
2615 </SpectrumIdentificationResult>
2616 </SpectrumIdentificationList>
2617 </AnalysisData>
2618 </DataCollection>
2619 </MzIdentML>