view test-data/201208-378803-msgf-2mmu-tryptic-many_mods.mzid @ 1:797c755b9e74 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6-dirty
author galaxyp
date Sun, 21 Feb 2016 11:27:00 -0500
parents ee56530a559f
children
line wrap: on
line source

<?xml version="1.0" encoding="UTF-8"?>
<MzIdentML id="MS-GF+" version="1.1.0" xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2015-11-09T22:47:09" >
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</cvList>
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</AnalysisSoftwareList>
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        <PeptideSequence>AMGSNMEKVCLK</PeptideSequence>
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        <PeptideSequence>PLMSNHSLKK</PeptideSequence>
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            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
        <Modification monoisotopicMassDelta="343.03178476" location="4">
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        <Modification monoisotopicMassDelta="144.102063" location="10">
            <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep9">
        <PeptideSequence>RLYNWSILSK</PeptideSequence>
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        </Modification>
        <Modification monoisotopicMassDelta="343.03178476" location="6">
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        <Modification monoisotopicMassDelta="144.102063" location="10">
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        </Modification>
    </Peptide>
    <Peptide id="Pep10">
        <PeptideSequence>RLYNWSILSK</PeptideSequence>
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        </Modification>
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        <Modification monoisotopicMassDelta="144.102063" location="10">
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        </Modification>
    </Peptide>
    <Peptide id="Pep11">
        <PeptideSequence>RDDLLRQLLK</PeptideSequence>
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        </Modification>
        <Modification monoisotopicMassDelta="144.102063" location="10">
            <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep12">
        <PeptideSequence>LLQRLLDDRK</PeptideSequence>
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        </Modification>
        <Modification monoisotopicMassDelta="144.102063" location="10">
            <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep13">
        <PeptideSequence>NLNEWANNMEDISKKVEPK</PeptideSequence>
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        </Modification>
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        </Modification>
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        <Modification monoisotopicMassDelta="144.102063" location="19">
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        </Modification>
    </Peptide>
    <Peptide id="Pep14">
        <PeptideSequence>PEVKKSIDEMNNAWENLNK</PeptideSequence>
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        </Modification>
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        <Modification monoisotopicMassDelta="144.102063" location="5">
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        </Modification>
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        <Modification monoisotopicMassDelta="144.102063" location="19">
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        </Modification>
    </Peptide>
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        <PeptideSequence>LVSDANEQYK</PeptideSequence>
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        </Modification>
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            <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep16">
        <PeptideSequence>YQENADSVLK</PeptideSequence>
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        </Modification>
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        </Modification>
    </Peptide>
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        <PeptideSequence>QMEAESISSSEQKHIQK</PeptideSequence>
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        </Modification>
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        </Modification>
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        <Modification monoisotopicMassDelta="144.102063" location="17">
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        </Modification>
    </Peptide>
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        <PeptideSequence>QQAHIGEKMSHLRELQPVK</PeptideSequence>
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        </Modification>
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        </Modification>
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        </Modification>
    </Peptide>
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        <PeptideSequence>EDHELCLQRTFVNK</PeptideSequence>
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        </Modification>
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        </Modification>
        <Modification monoisotopicMassDelta="343.03178476" location="6">
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
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        <PeptideSequence>TRGPAALSEEK</PeptideSequence>
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        </Modification>
    </Peptide>
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        <Modification monoisotopicMassDelta="144.102063" location="20">
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        </Modification>
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        </Modification>
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        </Modification>
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        </Modification>
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        <PeptideSequence>RCNVARPHLRAYCK</PeptideSequence>
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        </Modification>
    </Peptide>
    <Peptide id="Pep37">
        <PeptideSequence>MSHLRELQPVKYK</PeptideSequence>
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        <PeptideSequence>QLCLCVEQHLK</PeptideSequence>
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        </Modification>
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        </Modification>
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        </Modification>
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        </Modification>
    </Peptide>
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        <PeptideSequence>NLNEWANNMEDISKK</PeptideSequence>
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        </Modification>
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        </Modification>
        <Modification monoisotopicMassDelta="144.102063" location="15">
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        </Modification>
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        </Modification>
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        </Modification>
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</DataCollection>
</MzIdentML>