Mercurial > repos > galaxyp > msi_qualitycontrol

changeset 7:b86a66dd1a16 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_qualitycontrol commit dd64f41874a56c4e2619bf58ae3681d806cf9b3f
author galaxyp
date Tue, 08 May 2018 02:36:43 -0400
parents 5c63fe03ed9e
children 52ef77866de8
files msi_qualitycontrol.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/msi_qualitycontrol.xml	Mon Apr 23 17:19:35 2018 -0400
+++ b/msi_qualitycontrol.xml	Tue May 08 02:36:43 2018 -0400
@@ -576,7 +576,7 @@
 
         ### plot the ppm difference theor. mz value to closest mz value: 
 
-        calibrant_names = as.character(calibrant_list[,2])
+        calibrant_names = as.character(inputcalibrants[,2])
         diff_df = data.frame(differencevector, calibrant_names)        
         diff_plot<-ggplot(data=diff_df, aes(x=calibrant_names, y=differencevector)) + geom_col() + theme_minimal() +
         labs(title="Theoretical calibrant mz vs. closest measured mz", x="calibrants", y = "Difference in ppm")+