Mercurial > repos > galaxyp > msms_extractor

diff test-data/test_psmreport.tabular @ 0:4bef80b09854 draft default tip

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"planemo upload commit 498440b547e1feaa6a81764b55ac8208626d70a8"
author galaxyp
date Tue, 29 Oct 2019 11:09:46 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_psmreport.tabular	Tue Oct 29 11:09:46 2019 -0400
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+	Protein(s)	Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Localization Confidence	Probabilistic PTM score	D-score	Confidence [%]	Validation
+10575	A0A087WNL7, A0A087WNX7, A0A087WP63, A0A087WQ44, P58390, Q61670	QPPPPPR		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.10305.10305.2		4652.1978	467.2789612	2+	2+	931.5361349	1	4.155868855				93.06930693	Confident
+10576	Q9D6J6, Q9D6J6-2	GPGFGVQAGL		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.8410.8410.2		3878.6177	523.791687	2+	2+	1045.567829	0	0.947096				100	Confident
+10577	A0A140T8V5, P17918	IEDEEAS		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.2555.2555.2		1516.3381	468.7180481	2+	2+	935.4205556	0	1.05361899				95.04950495	Confident
+10578	P10854, Q64478, Q64525, Q6ZWY9	IAGEASR		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.1505.1505.2		1063.2866	424.2417908	2+	2+	846.4681149	0	1.076889273				93.06930693	Confident
+10579	Q60692	FTIATLPPP		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.10811.10811.2		4869.3752	550.828064	2+	2+	1099.639931	0	1.492079647				94.05940594	Confident
+10580	Q9CXU4, Q9WTQ8	GSLLQQSL		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.8515.8515.2		3922.2633	495.291626	2+	2+	988.5674946	0	1.215895185				91.08910891	Confident
+10581	A6X925, B2KF55, Q9D2M8, Q9D2M8-2	LPQPPEGQTYNN		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.5771.5771.2		2795.7924	751.3736572	2+	2+	1500.733056	0	-0.196181326				96.03960396	Confident
+10582	P09411	VLPGVDALSNV		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.11153.11153.2		5015.2472	614.3571167	2+	2+	1226.699237	0	0.360900738				100	Confident
+10583	P63038, P63038-2	DPGMGAMGGMGGG	Oxidation of M(4, 10, 7)	iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.1230.1230.2		936.9463	643.7511597	2+	2+	1285.485892	0	1.455532533	Oxidation of M (4: Very Confident, 7: Very Confident, 10: Very Confident)	Oxidation of M (4: 100.0, 7: 100.0, 10: 100.0)	Oxidation of M (4: 99.85994397759103, 7: 99.85994397759103, 10: 99.85994397759103)	95.04950495	Confident
+10584	D3Z3Z9, E9Q2Q9, F6X737, K4DI78, Q3TRP8, Q8C0D9, Q8C0D9-2, Q9DBN9, Q9JKY0, Q9WUZ7	GIPLPPQ		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.6828.6828.2		3218.7408	433.2674561	2+	2+	864.5190878	0	1.467161264				97.02970297	Confident
+10585	H3BLM7, H9H9T1, Q3TGF2	TGQEVAQAQES		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.1968.1968.2		1266.375	646.3167114	2+	2+	1290.617358	0	1.169742125				96.03960396	Confident
+10586	E9Q3W4, Q9QXS1, Q9QXS1-10, Q9QXS1-11, Q9QXS1-12, Q9QXS1-13, Q9QXS1-14, Q9QXS1-15, Q9QXS1-16, Q9QXS1-2, Q9QXS1-3, Q9QXS1-4, Q9QXS1-5, Q9QXS1-6, Q9QXS1-7, Q9QXS1-8, Q9QXS1-9	YASGPSASLGGPESAVA		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.6943.6943.2		3266.5296	832.9186401	2+	2+	1663.817514	0	3.1294327				100	Confident
+10587	Q8BGD8	FEAGGFQSSQSTENS		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.5795.5795.2		2804.2182	860.8845215	2+	2+	1718.750557	1	0.336087629				97.02970297	Confident
+10588	A0A087WQS2, Q9CQC6	NAEEESESEAEEGD		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.2725.2725.2		1584.4306	834.8273315	2+	2+	1667.640397	0	-0.171970548				100	Confident
+10589	Q99L27	VTQQVNPIFSNSQ		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.7612.7612.2		3547.5953	803.92	2+	2+	1604.828019	1	-3.688672461				90.0990099	Confident
+10590	H3BLM7, H9H9T1, Q3TGF2	TGQEVAQAQES		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.2044.2044.2		1298.5425	646.3157959	2+	2+	1290.617358	0	-0.246790046				99.00990099	Confident
+10591	D3Z2H9, E9Q5J9, P21107-2	MLDQTLLDLNEM	Oxidation of M(12, 1)	iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.10715.10715.2		4829.5611	806.3909302	2+	2+	1610.765345	0	1.21702246	Oxidation of M (1: Very Confident, 12: Very Confident)	Oxidation of M (1: 100.0, 12: 100.0)	Oxidation of M (1: 100.0, 12: 100.0)	100	Confident
+10592	Q64010	LLDQQNPDEDFS		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.8198.8198.2		3792.9843	782.8687134	2+	2+	1563.717466	0	3.453967916				100	Confident
+10593	D3Z6F5, Q03265	EIVTNFLAGFEP		iTRAQ 4-plex of peptide N-term(1)	Mo_Tai_iTRAQ_f1.mgf	Mo_Tai_iTRAQ_f1.11592.11592.2		5136.2899	740.8937988	2+	2+	1479.77313	0	-0.057710511				94.05940594	Confident