# HG changeset patch
# User galaxyp
# Date 1710244011 0
# Node ID de7593c294991210ca884bb52dabbb01026f784d
# Parent  b7034eff0db18d86571c89f052c5b8311c0bf678
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msstats commit 63cff07026599f16d57da27c5897b7e88ad41ae5

diff -r b7034eff0db1 -r de7593c29499 msstats.xml
--- a/msstats.xml	Tue Jan 31 18:14:55 2023 +0000
+++ b/msstats.xml	Tue Mar 12 11:46:51 2024 +0000
@@ -23,6 +23,9 @@
         </xml>
         
     </macros>
+    <xrefs>
+        <xref type="bio.tools">msstatstmt</xref>
+    </xrefs>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">bioconductor-msstats</requirement>
     </requirements>
@@ -1020,7 +1023,7 @@
 
 **Input data**
 
-- Data in tabular or csv format, either in the 10-column MSstats format or the outputs of spectral processing tools such as `MaxQuant <http://coxdocs.org/doku.php?id=maxquant:start/>`_, `OpenSWATH <http://openswath.org/en/latest/>`_
+- Data in tabular or csv format, either in the 10-column MSstats format or the outputs of spectral processing tools such as `MaxQuant <https://cox-labs.github.io/coxdocs/maxquant_instructions.html>`_, `OpenSWATH <http://openswath.org/en/latest/>`_
 
     - MSstats format: tabular file with 10 column either manually curated or other sources such as Swath2stats tool which is implemented in Pyprophet export in Galaxy. For manual curation: Names of headers are fixed but not case sensitive: