Mercurial > repos > galaxyp > msstatstmt
diff msstatstmt.xml @ 5:a5e394b36d87 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msstatstmt commit 909dc08cad859acb747324c8c867770022a2a455"
| author | galaxyp |
|---|---|
| date | Wed, 11 Aug 2021 11:11:22 +0000 |
| parents | 8375a0035d79 |
| children | bd1535813cfe |
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--- a/msstatstmt.xml Mon Jul 26 20:21:27 2021 +0000 +++ b/msstatstmt.xml Wed Aug 11 11:11:22 2021 +0000 @@ -564,7 +564,7 @@ **Notes** -- MSstatsTMT 11 column format: For TMT datasets an additional 'Channel' column is required. +- MSstatsTMT 11 column format: For TMT datasets an additional 'Channel' column is required, which has to be in the format 'channel.X' with X being the channel number.. :: @@ -582,13 +582,13 @@ #> 4 3 .(TMT6plex)AFVEVNEEGTEAAAATAGMM(Oxidation)TVR_3 3 #> 5 3 .(TMT6plex)AFVEVNEEGTEAAAATAGMM(Oxidation)TVR_3 3 #> 6 3 .(TMT6plex)AFVEVNEEGTEAAAATAGMM(Oxidation)TVR_3 3 - #> TechRepMixture Run Channel BioReplicate Condition Intensity - #> 1 3_3 3_3_3 1 21 Long_HF NA - #> 2 3_3 3_3_3 2 22 Norm 1068.580 - #> 3 3_3 3_3_3 3 23 Long_M 1508.330 - #> 4 3_3 3_3_3 4 24 Long_HF NA - #> 5 3_3 3_3_3 5 25 Long_LF 1580.951 - #> 6 3_3 3_3_3 6 26 Long_HF 1820.072 + #> TechRepMixture Run Channel BioReplicate Condition Intensity + #> 1 3_3 3_3_3 channel.1 21 Long_HF NA + #> 2 3_3 3_3_3 channel.2 22 Norm 1068.580 + #> 3 3_3 3_3_3 channel.3 23 Long_M 1508.330 + #> 4 3_3 3_3_3 channel.4 24 Long_HF NA + #> 5 3_3 3_3_3 channel.5 25 Long_LF 1580.951 + #> 6 3_3 3_3_3 channel.6 26 Long_HF 1820.072 For more information please visit the `MSstatsConvert documentation <https://bioconductor.org/packages/devel/bioc/vignettes/MSstatsConvert/inst/doc/msstats_data_format.html>`_ @@ -619,6 +619,7 @@ For additional help please visit the `MSstatsTMT documentation <https://msstats.org/msstatstmt/>`_ ]]> </help> + <citations> <citation type="doi">10.1074/mcp.ra120.002105</citation> </citations>