view test-data/201208-378803-msgf.mzid @ 3:64af47ae134d draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 82368da0ad9f7dcce4ce99a15c749eed915606ee
author galaxyp
date Thu, 02 Nov 2017 14:14:54 -0400
parents 8240d0714a97
children
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<?xml version="1.0" encoding="UTF-8"?>
<MzIdentML id="MS-GF+" version="1.1.0" xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2014-09-05T13:19:45" >
<cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
    <cv id="PSI-MS" uri="http://psidev.cvs.sourceforge.net/viewvc/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo" version="3.30.0" fullName="PSI-MS"/>
    <cv id="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" fullName="UNIMOD"/>
    <cv id="UO" uri="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo" fullName="UNIT-ONTOLOGY"/>
</cvList>
<AnalysisSoftwareList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
    <AnalysisSoftware version="Beta (v10072)" name="MS-GF+" id="ID_software">
        <SoftwareName>
            <cvParam accession="MS:1002048" cvRef="PSI-MS" name="MS-GF+"/>
        </SoftwareName>
    </AnalysisSoftware>
</AnalysisSoftwareList>
<SequenceCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|30794280|ref|NP_851335.1| serum albumin precursor [Bos taurus]" name="protein description"/>
    </DBSequence>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528993971|ref|XP_005219929.1| PREDICTED: lactoperoxidase isoform X1 [Bos taurus]" name="protein description"/>
    </DBSequence>
    <DBSequence accession="gi|528993973|ref|XP_005219930.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq31862">
        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528993973|ref|XP_005219930.1| PREDICTED: lactoperoxidase isoform X2 [Bos taurus]" name="protein description"/>
    </DBSequence>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528993975|ref|XP_005219931.1| PREDICTED: lactoperoxidase isoform X3 [Bos taurus]" name="protein description"/>
    </DBSequence>
    <DBSequence accession="gi|27806851|ref|NP_776358.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq47665">
        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|27806851|ref|NP_776358.1| lactoperoxidase precursor [Bos taurus]" name="protein description"/>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|27806963|ref|NP_776953.1| alpha-S2-casein precursor [Bos taurus]" name="protein description"/>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528944676|ref|XP_005204734.1| PREDICTED: microtubule-actin cross-linking factor 1 isoform X1 [Bos taurus]" name="protein description"/>
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    <DBSequence accession="gi|219804516|ref|NP_001137332.1|" searchDatabase_ref="SearchDB_1" length="5422" id="DBSeq38514">
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    <DBSequence accession="gi|32880221|ref|NP_872593.1|" searchDatabase_ref="SearchDB_1" length="558" id="DBSeq47106">
        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|32880221|ref|NP_872593.1| glutamate dehydrogenase 1, mitochondrial precursor [Bos taurus]" name="protein description"/>
    </DBSequence>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528923273|ref|XP_005196452.1| PREDICTED: rab effector MyRIP isoform X1 [Bos taurus]" name="protein description"/>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|119924469|ref|XP_001252524.1| PREDICTED: pregnancy-associated glycoprotein 2-like [Bos taurus]" name="protein description"/>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|358414198|ref|XP_002700672.2| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 12 member 1 [Bos taurus]" name="protein description"/>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|529012038|ref|XP_005226889.1| PREDICTED: pregnancy-associated glycoprotein 2 isoform X1 [Bos taurus]" name="protein description"/>
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        <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|139948503|ref|NP_001077142.1| uncharacterized protein LOC512219 [Bos taurus]" name="protein description"/>
    </DBSequence>
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    <DBSequence accession="XXX_gi|87196497|ref|NP_776354.2|" searchDatabase_ref="SearchDB_1" length="178" id="DBSeq101198"/>
    <Peptide id="Pep1">
        <PeptideSequence>YICDNQDTISSK</PeptideSequence>
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            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="5">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep2">
        <PeptideSequence>LVNELTEFAK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="3">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep3">
        <PeptideSequence>CCTESLVNR</PeptideSequence>
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            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="2">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="8">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep4">
        <PeptideSequence>CDENSPYR</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="1">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="4">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep5">
        <PeptideSequence>NAVPITPTLNR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="1">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep6">
        <PeptideSequence>TITGDCNNR</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="6">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="8">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep7">
        <PeptideSequence>TITGDCNNR</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="6">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep8">
        <PeptideSequence>ISELFDKLDSMSVDK</PeptideSequence>
    </Peptide>
    <Peptide id="Pep9">
        <PeptideSequence>NEMFQQLK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="1">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep10">
        <PeptideSequence>KQTALVELLK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="2">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep11">
        <PeptideSequence>GFCGLSQPK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="3">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep12">
        <PeptideSequence>EFENWLERSEK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="4">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep13">
        <PeptideSequence>SVQESLER</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="3">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep14">
        <PeptideSequence>KLYGTTTFKDAR</PeptideSequence>
    </Peptide>
    <Peptide id="Pep15">
        <PeptideSequence>LQDRWHR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="2">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep16">
        <PeptideSequence>ELQEYQNLVR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="6">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep17">
        <PeptideSequence>PKNDPKLKTQGK</PeptideSequence>
    </Peptide>
    <Peptide id="Pep18">
        <PeptideSequence>PKNDPKLKTQGK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="3">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep19">
        <PeptideSequence>HVGDLGNVTADK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep20">
        <PeptideSequence>QLQTGGIIDTVTGR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="1">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep21">
        <PeptideSequence>QLQTGGIIDTVTGR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="3">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep22">
        <PeptideSequence>NVFTRQLCLEHDEK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="6">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="8">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep23">
        <PeptideSequence>EQKWHVVSSKMEER</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="11">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep24">
        <PeptideSequence>NVFTRQLCLEHDEK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="8">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep25">
        <PeptideSequence>DFPIANGER</PeptideSequence>
    </Peptide>
    <Peptide id="Pep26">
        <PeptideSequence>ALAQRFTSWAHFCR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="4">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="13">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep27">
        <PeptideSequence>LGRQFQQIR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="4">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="6">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep28">
        <PeptideSequence>EEVMQGEEPNLEK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="5">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep29">
        <PeptideSequence>PTAEFQDR</PeptideSequence>
    </Peptide>
    <Peptide id="Pep30">
        <PeptideSequence>EPISVSSQQMLK</PeptideSequence>
    </Peptide>
    <Peptide id="Pep31">
        <PeptideSequence>VICQPRFNK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="3">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="4">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="8">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep32">
        <PeptideSequence>NEGIQEVQ</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="8">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep33">
        <PeptideSequence>RRCGDCK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="3">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="6">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep34">
        <PeptideSequence>RMMESR</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="3">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep35">
        <PeptideSequence>TSDATEMFQTVMDR</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="7">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
        <Modification monoisotopicMassDelta="15.9949" location="12">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep36">
        <PeptideSequence>YNNSVDPR</PeptideSequence>
    </Peptide>
    <Peptide id="Pep37">
        <PeptideSequence>FEDLAMWGGGVR</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="6">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep38">
        <PeptideSequence>QLEGRLQDLR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep39">
        <PeptideSequence>VWVCCVCQQARVLR</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="4">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="5">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="7">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="8">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="9">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep40">
        <PeptideSequence>LIGSDQESK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="6">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep41">
        <PeptideSequence>LAEAEKEGR</PeptideSequence>
    </Peptide>
    <Peptide id="Pep42">
        <PeptideSequence>GLKEFQDCNQK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="8">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="9">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="10">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep43">
        <PeptideSequence>KVQDWPN</PeptideSequence>
    </Peptide>
    <Peptide id="Pep44">
        <PeptideSequence>MMEQQATTE</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="1">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
        <Modification monoisotopicMassDelta="15.9949" location="2">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep45">
        <PeptideSequence>DYELQLMTYK</PeptideSequence>
    </Peptide>
    <Peptide id="Pep46">
        <PeptideSequence>SSDEETLSER</PeptideSequence>
    </Peptide>
    <Peptide id="Pep47">
        <PeptideSequence>EVEDEGFLR</PeptideSequence>
    </Peptide>
    <Peptide id="Pep48">
        <PeptideSequence>HSFLEDMSDK</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="7">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep49">
        <PeptideSequence>DLPFLSNEYK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep50">
        <PeptideSequence>PYDDDAEYMK</PeptideSequence>
    </Peptide>
    <Peptide id="Pep51">
        <PeptideSequence>NDQPHFDK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="1">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep52">
        <PeptideSequence>FSDHQAHIEK</PeptideSequence>
    </Peptide>
    <Peptide id="Pep53">
        <PeptideSequence>LMHDPSR</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="2">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep54">
        <PeptideSequence>AEMFEHLSEK</PeptideSequence>
    </Peptide>
    <Peptide id="Pep55">
        <PeptideSequence>AAQGALQPSL</PeptideSequence>
    </Peptide>
    <Peptide id="Pep56">
        <PeptideSequence>LETQYCK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="6">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep57">
        <PeptideSequence>QQSEVFAK</PeptideSequence>
        <Modification monoisotopicMassDelta="-17.026" location="0">
            <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="2">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep58">
        <PeptideSequence>QRSEMMRK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="1">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep59">
        <PeptideSequence>QSIDIEDDKKENK</PeptideSequence>
        <Modification monoisotopicMassDelta="-17.026" location="0">
            <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep60">
        <PeptideSequence>YNCDKMICRK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="3">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="8">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep61">
        <PeptideSequence>LQDSMAQDEK</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="5">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep62">
        <PeptideSequence>EGSHTRQHRIL</PeptideSequence>
    </Peptide>
    <Peptide id="Pep63">
        <PeptideSequence>QSHAILMEKR</PeptideSequence>
        <Modification monoisotopicMassDelta="-17.026" location="0">
            <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
        </Modification>
        <Modification monoisotopicMassDelta="15.9949" location="7">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep64">
        <PeptideSequence>FCKVMVDNIPKLR</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="2">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="15.9949" location="5">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="8">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep65">
        <PeptideSequence>DKNSCISIFQ</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="5">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="10">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep66">
        <PeptideSequence>ARWQEYQSR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="4">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep67">
        <PeptideSequence>ARWQEYQSR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep68">
        <PeptideSequence>GGVYIRLKCDKWKK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="9">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep69">
        <PeptideSequence>DFHPQDNK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep70">
        <PeptideSequence>LDGIKTRYAD</PeptideSequence>
    </Peptide>
    <Peptide id="Pep71">
        <PeptideSequence>EAQCCEQFVGNYK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="4">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="5">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="7">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="11">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep72">
        <PeptideSequence>LQSYLEM</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="7">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep73">
        <PeptideSequence>DAMETASR</PeptideSequence>
    </Peptide>
    <Peptide id="Pep74">
        <PeptideSequence>EQIGENK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="2">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="6">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep75">
        <PeptideSequence>LMLCLPVLEMYSK</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="4">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep76">
        <PeptideSequence>YINDKCL</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="3">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="58.00548" location="6">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep77">
        <PeptideSequence>ALELTTVEDHVKNFR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="13">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep78">
        <PeptideSequence>QQEEMR</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="1">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="2">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep79">
        <PeptideSequence>LEECEQ</PeptideSequence>
        <Modification monoisotopicMassDelta="58.00548" location="4">
            <cvParam accession="MS:1001460" cvRef="UNIMOD" name="unknown modification"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep80">
        <PeptideSequence>SPDHMLKSTISVK</PeptideSequence>
        <Modification monoisotopicMassDelta="15.9949" location="5">
            <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep81">
        <PeptideSequence>VVRMTQQQENPK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="6">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="10">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
    </Peptide>
    <Peptide id="Pep82">
        <PeptideSequence>QFMENK</PeptideSequence>
        <Modification monoisotopicMassDelta="0.984016" location="1">
            <cvParam accession="UNIMOD:7" cvRef="UNIMOD" name="Deamidated"/>
        </Modification>
        <Modification monoisotopicMassDelta="0.984016" location="5">
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        </Modification>
    </Peptide>
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        </Modification>
    </Peptide>
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    </Peptide>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
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        </Modification>
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        </Modification>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
    </Peptide>
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        </Modification>
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        </Modification>
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        </Modification>
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        </Modification>
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        </Modification>
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                    <userParam value="0.0" name="StdevErrorAll"/>
                    <userParam value="5.6731687" name="MeanErrorTop7"/>
                    <userParam value="0.0" name="StdevErrorTop7"/>
                    <userParam value="-5.6731687" name="MeanRelErrorAll"/>
                    <userParam value="0.0" name="StdevRelErrorAll"/>
                    <userParam value="-5.6731687" name="MeanRelErrorTop7"/>
                    <userParam value="0.0" name="StdevRelErrorTop7"/>
                </SpectrumIdentificationItem>
                <SpectrumIdentificationItem passThreshold="true" rank="3" peptide_ref="Pep123" calculatedMassToCharge="677.2850341796875" experimentalMassToCharge="677.2626342773438" chargeState="2" id="SII_48_3">
                    <PeptideEvidenceRef peptideEvidence_ref="PepEv_66843_123_1364"/>
                    <PeptideEvidenceRef peptideEvidence_ref="PepEv_74384_123_1294"/>
                    <PeptideEvidenceRef peptideEvidence_ref="PepEv_95782_123_1294"/>
                    <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-42" name="MS-GF:RawScore"/>
                    <cvParam accession="MS:1002050" cvRef="PSI-MS" value="40" name="MS-GF:DeNovoScore"/>
                    <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0031106102" name="MS-GF:SpecEValue"/>
                    <cvParam accession="MS:1002053" cvRef="PSI-MS" value="123.513" name="MS-GF:EValue"/>
                    <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
                    <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
                    <userParam value="0" name="IsotopeError"/>
                    <userParam value="HCD" name="AssumedDissociationMethod"/>
                    <userParam value="0.02173913" name="ExplainedIonCurrentRatio"/>
                    <userParam value="0.0" name="NTermIonCurrentRatio"/>
                    <userParam value="0.02173913" name="CTermIonCurrentRatio"/>
                    <userParam value="138.0" name="MS2IonCurrent"/>
                    <userParam value="1" name="NumMatchedMainIons"/>
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                    <userParam value="0.0" name="StdevErrorAll"/>
                    <userParam value="5.6731687" name="MeanErrorTop7"/>
                    <userParam value="0.0" name="StdevErrorTop7"/>
                    <userParam value="-5.6731687" name="MeanRelErrorAll"/>
                    <userParam value="0.0" name="StdevRelErrorAll"/>
                    <userParam value="-5.6731687" name="MeanRelErrorTop7"/>
                    <userParam value="0.0" name="StdevRelErrorTop7"/>
                </SpectrumIdentificationItem>
            </SpectrumIdentificationResult>
        </SpectrumIdentificationList>
    </AnalysisData>
</DataCollection>
</MzIdentML>