Mercurial > repos > galaxyp > mz_to_sqlite

diff mz_to_sqlite.xml @ 2:1320693cbf1e draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mz_to_sqlite commit ae0093d9f1576f38aee83b2ed5e7f70c901d5864
author galaxyp
date Mon, 11 Feb 2019 17:30:46 -0500
parents e34bdac5b157
children 728d459bafe8
line wrap: on
line diff
--- a/mz_to_sqlite.xml	Wed Mar 28 09:33:18 2018 -0400
+++ b/mz_to_sqlite.xml	Mon Feb 11 17:30:46 2019 -0500
@@ -1,7 +1,7 @@
-<tool id="mz_to_sqlite" name="mz to sqlite" version="2.0.0">
+<tool id="mz_to_sqlite" name="mz to sqlite" version="2.0.2">
     <description>Extract mzIdentML and associated proteomics datasets into a SQLite DB</description>
     <requirements>
-      <requirement type="package" version="2.0.0">mztosqlite</requirement>
+      <requirement type="package" version="2.0.2">mztosqlite</requirement>
     </requirements>
    <stdio>
        <exit_code range="1:"  level="fatal" description="Error Running mz_to_sqlite" />
@@ -38,6 +38,10 @@
     </outputs>
     <tests>
         <test>
+            <param name="mzinput" value="test_id.mzid" ftype="mzid"></param>
+            <param name="scanfiles" value="test.mgf" ftype="mgf"></param>
+            <param name="searchdbs" value="test.fasta" ftype="fasta"></param>
+            <output name="sqlite_db" file="sqlite.db" />
         </test>
     </tests>
     <help>
@@ -46,4 +50,5 @@
 
 ]]>
     </help>
+    <citations></citations>
 </tool>