Mercurial > repos > galaxyp > openms
comparison idxml_to_peptides.xml @ 2:cf0d72c7b482 draft
Update.
author | galaxyp |
---|---|
date | Fri, 10 May 2013 17:31:05 -0400 |
parents | ba86fd127f5a |
children |
comparison
equal
deleted
inserted
replaced
1:5c65f8116244 | 2:cf0d72c7b482 |
---|---|
1 <tool id="openms_idxml_to_peptides" version="0.1.0" name="Export peptide report from idXML "> | 1 <tool id="openms_idxml_to_peptides" version="0.1.0" name="Export peptide report from idXML "> |
2 <description> | 2 <description> |
3 </description> | 3 </description> |
4 <requirements> | 4 <macros> |
5 <requirement type="package">openms</requirement> | 5 <import>macros.xml</import> |
6 </requirements> | 6 </macros> |
7 <expand macro="stdio" /> | |
8 <expand macro="requires" /> | |
7 <command interpreter="python"> | 9 <command interpreter="python"> |
8 idxml_exporter.py --type peptide --in ${in} --out ${out} | 10 openms_exporter.py --type peptide --in ${in} --out ${out} |
9 </command> | 11 </command> |
10 <inputs> | 12 <inputs> |
11 <param format="idxml" name="in" type="data" label="Input Identification File"/> | 13 <param format="idxml" name="in" type="data" label="Input Identification File"/> |
12 </inputs> | 14 </inputs> |
13 <outputs> | 15 <outputs> |