--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/pepnovo_models.loc.sample	Wed Sep 09 20:04:20 2020 +0000
@@ -0,0 +1,23 @@
+# This is a sample file distributed with Galaxy that enables tools
+# to use pepnovo models
+# The file has three tab separated columns: name, value, and path.
+# The idea is that there are a number of models in a directory:
+# - each model directory has a unique name (columns 2 and 0)
+# - each model can contain a set of models (column 1)
+#
+# The following example works fo the default models from 
+# http://proteomics.ucsd.edu/Software/PepNovo.html (just remove the comment
+# chars and replace DIR_TO_PEPNOVO_MODELS)
+
+#default_models	CID_IT_TRYP	DIR_TO_PEPNOVO_MODELS
+#default_models	LTQ_COMP	DIR_TO_PEPNOVO_MODELS
+#default_models	DBC4_PEAK	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_TAG5	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_TAG6	DIR_TO_PEPNOVO_MODELS
+#default_models	ITDNV_PEAK	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_SCORE	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_TAG3	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_DNVPART	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_TAG4	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_DB	DIR_TO_PEPNOVO_MODELS
+#default_models	CID_IT_TRYP_CSP	DIR_TO_PEPNOVO_MODELS