Mercurial > repos > galaxyp > openms_compnovocid
diff CompNovoCID.xml @ 11:654700d6e02e draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
| author | galaxyp |
|---|---|
| date | Fri, 17 May 2019 04:58:54 -0400 |
| parents | e06fcd216b76 |
| children | ea09480c5d8f |
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--- a/CompNovoCID.xml Tue Mar 20 15:17:46 2018 -0400 +++ b/CompNovoCID.xml Fri May 17 04:58:54 2019 -0400 @@ -10,7 +10,7 @@ <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> - <command>CompNovoCID + <command detect_errors="aggressive"><![CDATA[CompNovoCID #if $param_in: -in $param_in @@ -104,7 +104,7 @@ -algorithm:residue_set "$adv_opts.param_algorithm_residue_set" #end if #end if -</command> +]]></command> <inputs> <param name="param_in" type="data" format="mzml" optional="False" label="input file in mzML format" help="(-in) "/> <param name="param_algorithm_tryptic_only" type="text" size="30" value="true" label="if set to true only tryptic peptides are reported" help="(-tryptic_only) "> @@ -5218,5 +5218,5 @@ <help>Performs a de novo peptide identification using the CompNovo engine. -For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_CompNovoCID.html</help> +For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_CompNovoCID.html</help> </tool>