Mercurial > repos > galaxyp > openms_consensusid
diff generate-foo.sh @ 17:abffdfee3021 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms"
author | galaxyp |
---|---|
date | Mon, 22 Feb 2021 10:46:10 +0000 |
parents | feebe2054e40 |
children | f4be248c3d47 |
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--- a/generate-foo.sh Fri Nov 06 19:49:28 2020 +0000 +++ b/generate-foo.sh Mon Feb 22 10:46:10 2021 +0000 @@ -83,7 +83,7 @@ #echo python3 fill_ctd_clargs.py --ctd $ini $cli # using eval: otherwise for some reason quoted values are not used properly ('A B' -> ["'A", "B'"]) # >&2 echo "python3 fill_ctd_clargs.py --ctd $ini $cli" - eval "python3 fill_ctd_clargs.py --ctd $ini $cli" > "$ctdtmp" + eval "python3 fill_ctd_clargs.py --ini_file $ini --ctd_file ctd/$tool_id.ctd $cli" > "$ctdtmp" # echo $ctdtmp # >&2 cat $ctdtmp testtmp=$(mktemp)