Mercurial > repos > galaxyp > openms_converttramltotsv
comparison ConvertTraMLToTSV.xml @ 0:5d0e9de15ab1 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
| author | galaxyp |
|---|---|
| date | Wed, 01 Mar 2017 12:34:13 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:5d0e9de15ab1 |
|---|---|
| 1 <?xml version='1.0' encoding='UTF-8'?> | |
| 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> | |
| 3 <!--Proposed Tool Section: [Targeted Experiments]--> | |
| 4 <tool id="ConvertTraMLToTSV" name="ConvertTraMLToTSV" version="2.1.0"> | |
| 5 <description>Converts a TraML file to an OpenSWATH transition TSV file</description> | |
| 6 <macros> | |
| 7 <token name="@EXECUTABLE@">ConvertTraMLToTSV</token> | |
| 8 <import>macros.xml</import> | |
| 9 </macros> | |
| 10 <expand macro="references"/> | |
| 11 <expand macro="stdio"/> | |
| 12 <expand macro="requirements"/> | |
| 13 <command>ConvertTraMLToTSV | |
| 14 | |
| 15 #if $param_in: | |
| 16 -in $param_in | |
| 17 #end if | |
| 18 #if $param_out: | |
| 19 -out $param_out | |
| 20 #end if | |
| 21 #if $adv_opts.adv_opts_selector=='advanced': | |
| 22 #if $adv_opts.param_force: | |
| 23 -force | |
| 24 #end if | |
| 25 #end if | |
| 26 </command> | |
| 27 <inputs> | |
| 28 <param name="param_in" type="data" format="traml" optional="False" label="Input TraML file" help="(-in) "/> | |
| 29 <expand macro="advanced_options"> | |
| 30 <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/> | |
| 31 </expand> | |
| 32 </inputs> | |
| 33 <outputs> | |
| 34 <data name="param_out" format="tabular"/> | |
| 35 </outputs> | |
| 36 <help>Converts a TraML file to an OpenSWATH transition TSV file | |
| 37 | |
| 38 | |
| 39 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/doxygen/parameters/output/TOPP_ConvertTraMLToTSV.html</help> | |
| 40 </tool> |