Mercurial > repos > galaxyp > openms_converttramltotsv
diff ConvertTraMLToTSV.xml @ 0:5d0e9de15ab1 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
author | galaxyp |
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date | Wed, 01 Mar 2017 12:34:13 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ConvertTraMLToTSV.xml Wed Mar 01 12:34:13 2017 -0500 @@ -0,0 +1,40 @@ +<?xml version='1.0' encoding='UTF-8'?> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--Proposed Tool Section: [Targeted Experiments]--> +<tool id="ConvertTraMLToTSV" name="ConvertTraMLToTSV" version="2.1.0"> + <description>Converts a TraML file to an OpenSWATH transition TSV file</description> + <macros> + <token name="@EXECUTABLE@">ConvertTraMLToTSV</token> + <import>macros.xml</import> + </macros> + <expand macro="references"/> + <expand macro="stdio"/> + <expand macro="requirements"/> + <command>ConvertTraMLToTSV + +#if $param_in: + -in $param_in +#end if +#if $param_out: + -out $param_out +#end if +#if $adv_opts.adv_opts_selector=='advanced': + #if $adv_opts.param_force: + -force +#end if +#end if +</command> + <inputs> + <param name="param_in" type="data" format="traml" optional="False" label="Input TraML file" help="(-in) "/> + <expand macro="advanced_options"> + <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/> + </expand> + </inputs> + <outputs> + <data name="param_out" format="tabular"/> + </outputs> + <help>Converts a TraML file to an OpenSWATH transition TSV file + + +For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/doxygen/parameters/output/TOPP_ConvertTraMLToTSV.html</help> +</tool>