Mercurial > repos > galaxyp > openms_digestor

comparison 404-urls.patch @ 11:ede260ee1404 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f5fcdd54599554099fb00b1973cc91a766ad246a"
author galaxyp
date Wed, 23 Sep 2020 15:00:03 +0000
parents
children 4827e132ac53
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equal deleted inserted replaced
10:7af5860ae563 11:ede260ee1404
1 diff -ruN ClusterMassTracesByPrecursor.xml ClusterMassTracesByPrecursor.xml
2 --- ClusterMassTracesByPrecursor.xml 2020-09-21 17:02:36.060104555 +0200
3 +++ ClusterMassTracesByPrecursor.xml 2020-09-21 17:00:02.864815223 +0200
4 @@ -75,8 +75,6 @@
5 <expand macro="manutest_ClusterMassTracesByPrecursor"/>
6 </tests>
7 <help><![CDATA[Correlate precursor masstraces with fragment ion masstraces in SWATH maps based on their elution profile.
8 -
9 -
10 -For more information, visit http://www.openms.de/documentation/UTILS_ClusterMassTracesByPrecursor.html]]></help>
11 +]]></help>
12 <expand macro="references"/>
13 </tool>
14 diff -ruN ClusterMassTraces.xml ClusterMassTraces.xml
15 --- ClusterMassTraces.xml 2020-09-21 17:02:36.060104555 +0200
16 +++ ClusterMassTraces.xml 2020-09-21 17:00:22.192722036 +0200
17 @@ -69,8 +69,6 @@
18 <expand macro="manutest_ClusterMassTraces"/>
19 </tests>
20 <help><![CDATA[Creates pseudo spectra.
21 -
22 -
23 -For more information, visit http://www.openms.de/documentation/UTILS_ClusterMassTraces.html]]></help>
24 +]]></help>
25 <expand macro="references"/>
26 </tool>
27 diff -ruN FeatureFinderSuperHirn.xml FeatureFinderSuperHirn.xml
28 --- FeatureFinderSuperHirn.xml 2020-09-21 17:02:36.060104555 +0200
29 +++ FeatureFinderSuperHirn.xml 2020-09-21 17:00:42.372625907 +0200
30 @@ -103,8 +103,6 @@
31 <expand macro="manutest_FeatureFinderSuperHirn"/>
32 </tests>
33 <help><![CDATA[Finds mass spectrometric features in mass spectra.
34 -
35 -
36 -For more information, visit http://www.openms.de/documentation/TOPP_FeatureFinderSuperHirn.html]]></help>
37 +]]></help>
38 <expand macro="references"/>
39 </tool>
40 diff -ruN MSFraggerAdapter.xml MSFraggerAdapter.xml
41 --- MSFraggerAdapter.xml 2020-09-21 17:02:36.060104555 +0200
42 +++ MSFraggerAdapter.xml 2020-09-21 17:01:04.892519985 +0200
43 @@ -250,8 +250,6 @@
44 <expand macro="manutest_MSFraggerAdapter"/>
45 </tests>
46 <help><![CDATA[Peptide Identification with MSFragger
47 -
48 -
49 -For more information, visit http://www.openms.de/documentation/UTILS_MSFraggerAdapter.html]]></help>
50 +]]></help>
51 <expand macro="references"/>
52 </tool>
53 diff -ruN SimpleSearchEngine.xml SimpleSearchEngine.xml
54 --- SimpleSearchEngine.xml 2020-09-21 17:02:36.060104555 +0200
55 +++ SimpleSearchEngine.xml 2020-09-21 17:01:33.020389600 +0200
56 @@ -5373,8 +5373,6 @@
57 <expand macro="manutest_SimpleSearchEngine"/>
58 </tests>
59 <help><![CDATA[Annotates MS/MS spectra using SimpleSearchEngine.
60 -
61 -
62 -For more information, visit http://www.openms.de/documentation/UTILS_SimpleSearchEngine.html]]></help>
63 +]]></help>
64 <expand macro="references"/>
65 </tool>