Mercurial > repos > galaxyp > openms_dtaextractor

comparison DTAExtractor.xml @ 15:d8b1ec05fbd7 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:19:35 +0000
parents e31fe5424cbe
children 79706b7647c3
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14:856b0f25f4cc 15:d8b1ec05fbd7
50 </param> 50 </param>
51 <param name="level" argument="-level" type="text" optional="true" value="1,2,3" label="MS levels to extract" help=""> 51 <param name="level" argument="-level" type="text" optional="true" value="1,2,3" label="MS levels to extract" help="">
52 <expand macro="list_string_san"/> 52 <expand macro="list_string_san"/>
53 </param> 53 </param>
54 <expand macro="adv_opts_macro"> 54 <expand macro="adv_opts_macro">
55 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 55 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
56 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 56 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
57 <expand macro="list_string_san"/> 57 <expand macro="list_string_san"/>
58 </param> 58 </param>
59 </expand> 59 </expand>
60 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 60 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
61 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 61 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
62 </param> 62 </param>
63 </inputs> 63 </inputs>
64 <outputs> 64 <outputs>
65 <data name="stdout" format="txt" label="${tool.name} on ${on_string}: stdout"> 65 <data name="stdout" format="txt" label="${tool.name} on ${on_string}: stdout">
74 <expand macro="manutest_DTAExtractor"/> 74 <expand macro="manutest_DTAExtractor"/>
75 </tests> 75 </tests>
76 <help><![CDATA[Extracts spectra of an MS run file to several files in DTA format. 76 <help><![CDATA[Extracts spectra of an MS run file to several files in DTA format.
77 77
78 78
79 For more information, visit http://www.openms.de/documentation/TOPP_DTAExtractor.html]]></help> 79 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_DTAExtractor.html]]></help>
80 <expand macro="references"/> 80 <expand macro="references"/>
81 </tool> 81 </tool>