Mercurial > repos > galaxyp > openms_eicextractor

comparison EICExtractor.xml @ 13:0546885ddaf9 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:23:13 +0000
parents 2bd3c83eed94
children f253d41d9170
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12:aeaadbf1d7ec 13:0546885ddaf9
79 </section> 79 </section>
80 <expand macro="adv_opts_macro"> 80 <expand macro="adv_opts_macro">
81 <param name="out_separator" argument="-out_separator" type="text" optional="true" value="," label="Separator character for output CSV file" help=""> 81 <param name="out_separator" argument="-out_separator" type="text" optional="true" value="," label="Separator character for output CSV file" help="">
82 <expand macro="list_string_san"/> 82 <expand macro="list_string_san"/>
83 </param> 83 </param>
84 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 84 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
85 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 85 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
86 <expand macro="list_string_san"/> 86 <expand macro="list_string_san"/>
87 </param> 87 </param>
88 </expand> 88 </expand>
89 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 89 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
90 <option value="out_debug_TIC_FLAG">out_debug_TIC (Optional output file (for first input) containing the smoothed TIC, S/N levels and picked RT positions)</option> 90 <option value="out_debug_TIC_FLAG">out_debug_TIC (Optional output file (for first input) containing the smoothed TIC, S/N levels and picked RT positions)</option>
91 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 91 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
92 </param> 92 </param>
93 </inputs> 93 </inputs>
94 <outputs> 94 <outputs>
105 <expand macro="manutest_EICExtractor"/> 105 <expand macro="manutest_EICExtractor"/>
106 </tests> 106 </tests>
107 <help><![CDATA[Extracts intensities from dedicates positions in a LC/MS map 107 <help><![CDATA[Extracts intensities from dedicates positions in a LC/MS map
108 108
109 109
110 For more information, visit http://www.openms.de/documentation/TOPP_EICExtractor.html]]></help> 110 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_EICExtractor.html]]></help>
111 <expand macro="references"/> 111 <expand macro="references"/>
112 </tool> 112 </tool>