Mercurial > repos > galaxyp > openms_eicextractor

diff EICExtractor.xml @ 9:e8a9dc186db5 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:28:13 -0400
parents 72e0bc55a462
children 2bd3c83eed94
line wrap: on
line diff
--- a/EICExtractor.xml	Tue Mar 20 14:56:09 2018 -0400
+++ b/EICExtractor.xml	Wed May 15 08:28:13 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>EICExtractor
+  <command detect_errors="aggressive"><![CDATA[EICExtractor
 
 -in
   #for token in $param_in:
@@ -55,7 +55,7 @@
   -auto_rt:SNThreshold $adv_opts.param_auto_rt_SNThreshold
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzml" multiple="true" optional="False" size="30" label="Input raw data file" help="(-in) ">
       <sanitizer>
@@ -99,5 +99,5 @@
   <help>Extracts intensities from dedicates positions in a LC/MS map
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_EICExtractor.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_EICExtractor.html</help>
 </tool>