Mercurial > repos > galaxyp > openms_externalcalibration

comparison ExternalCalibration.xml @ 12:61f5ad339398 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:22:30 +0000
parents 4f6a44916c89
children 1168fee85066
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11:2a7feb3bf985 12:61f5ad339398
47 <param name="power" argument="-power" type="float" optional="true" value="0.0" label="Power (dependent on m/z)" help=""/> 47 <param name="power" argument="-power" type="float" optional="true" value="0.0" label="Power (dependent on m/z)" help=""/>
48 <param name="ms_level" argument="-ms_level" type="text" optional="true" value="1 2 3" label="Target MS levels to apply the transformation onto" help="Scans with other levels remain unchanged (space separated list, in order to allow for spaces in list items surround them by single quotes)"> 48 <param name="ms_level" argument="-ms_level" type="text" optional="true" value="1 2 3" label="Target MS levels to apply the transformation onto" help="Scans with other levels remain unchanged (space separated list, in order to allow for spaces in list items surround them by single quotes)">
49 <expand macro="list_integer_valsan"/> 49 <expand macro="list_integer_valsan"/>
50 </param> 50 </param>
51 <expand macro="adv_opts_macro"> 51 <expand macro="adv_opts_macro">
52 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 52 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
53 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 53 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
54 <expand macro="list_string_san"/> 54 <expand macro="list_string_san"/>
55 </param> 55 </param>
56 </expand> 56 </expand>
57 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 57 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
58 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 58 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
59 </param> 59 </param>
60 </inputs> 60 </inputs>
61 <outputs> 61 <outputs>
62 <data name="out" label="${tool.name} on ${on_string}: out" format="mzml"/> 62 <data name="out" label="${tool.name} on ${on_string}: out" format="mzml"/>
69 <expand macro="manutest_ExternalCalibration"/> 69 <expand macro="manutest_ExternalCalibration"/>
70 </tests> 70 </tests>
71 <help><![CDATA[Applies an external mass recalibration. 71 <help><![CDATA[Applies an external mass recalibration.
72 72
73 73
74 For more information, visit http://www.openms.de/documentation/TOPP_ExternalCalibration.html]]></help> 74 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_ExternalCalibration.html]]></help>
75 <expand macro="references"/> 75 <expand macro="references"/>
76 </tool> 76 </tool>