diff FeatureFinderIdentification.xml @ 1:6a3bbd5b8cb6 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
author galaxyp
date Tue, 18 Apr 2017 16:04:04 -0400
parents 3a61c78033f0
children c040ffc3ac9b
line wrap: on
line diff
--- a/FeatureFinderIdentification.xml	Wed Mar 01 12:55:55 2017 -0500
+++ b/FeatureFinderIdentification.xml	Tue Apr 18 16:04:04 2017 -0400
@@ -31,7 +31,12 @@
   -trafo_out $param_trafo_out
 #end if
 #if $param_extract_reference_rt:
-  -extract:reference_rt $param_extract_reference_rt
+  -extract:reference_rt
+  #if " " in str($param_extract_reference_rt):
+    "$param_extract_reference_rt"
+  #else
+    $param_extract_reference_rt
+  #end if
 #end if
 #if $param_extract_rt_window:
   -extract:rt_window $param_extract_rt_window
@@ -46,7 +51,12 @@
   -detect:peak_width $param_detect_peak_width
 #end if
 #if $param_model_type:
-  -model:type $param_model_type
+  -model:type
+  #if " " in str($param_model_type):
+    "$param_model_type"
+  #else
+    $param_model_type
+  #end if
 #end if
 #if $adv_opts.adv_opts_selector=='advanced':
     #if $adv_opts.param_force: