Mercurial > repos > galaxyp > openms_featurefinderisotopewavelet

comparison FeatureFinderIsotopeWavelet.xml @ 13:4643d1a80309 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:04:43 +0000
parents becf3642c634
children 832c471f0d31
comparison
equal deleted inserted replaced
12:b3881e7a2990 13:4643d1a80309
57 <param name="rt_votes_cutoff" argument="-algorithm:sweep_line:rt_votes_cutoff" type="integer" optional="true" min="0" value="5" label="Defines the minimum number of subsequent scans where a pattern must occur to be considered as a feature" help=""/> 57 <param name="rt_votes_cutoff" argument="-algorithm:sweep_line:rt_votes_cutoff" type="integer" optional="true" min="0" value="5" label="Defines the minimum number of subsequent scans where a pattern must occur to be considered as a feature" help=""/>
58 <param name="rt_interleave" argument="-algorithm:sweep_line:rt_interleave" type="integer" optional="true" min="0" value="1" label="Defines the maximum number of scans (w.r.t" help="rt_votes_cutoff) where an expected pattern is missing. There is usually no reason to change the default value"/> 58 <param name="rt_interleave" argument="-algorithm:sweep_line:rt_interleave" type="integer" optional="true" min="0" value="1" label="Defines the maximum number of scans (w.r.t" help="rt_votes_cutoff) where an expected pattern is missing. There is usually no reason to change the default value"/>
59 </section> 59 </section>
60 </section> 60 </section>
61 <expand macro="adv_opts_macro"> 61 <expand macro="adv_opts_macro">
62 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 62 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
63 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 63 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
64 <expand macro="list_string_san"/> 64 <expand macro="list_string_san"/>
65 </param> 65 </param>
66 </expand> 66 </expand>
67 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 67 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
68 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 68 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
69 </param> 69 </param>
70 </inputs> 70 </inputs>
71 <outputs> 71 <outputs>
72 <data name="out" label="${tool.name} on ${on_string}: out" format="featurexml"/> 72 <data name="out" label="${tool.name} on ${on_string}: out" format="featurexml"/>
79 <expand macro="manutest_FeatureFinderIsotopeWavelet"/> 79 <expand macro="manutest_FeatureFinderIsotopeWavelet"/>
80 </tests> 80 </tests>
81 <help><![CDATA[Detects two-dimensional features in LC-MS data. 81 <help><![CDATA[Detects two-dimensional features in LC-MS data.
82 82
83 83
84 For more information, visit http://www.openms.de/documentation/TOPP_FeatureFinderIsotopeWavelet.html]]></help> 84 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_FeatureFinderIsotopeWavelet.html]]></help>
85 <expand macro="references"/> 85 <expand macro="references"/>
86 </tool> 86 </tool>