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comparison FileInfo.xml @ 9:92922182d423 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Fri, 17 May 2019 04:48:47 -0400
parents 3b8f7c6ecda1
children 98f171dab07c
comparison
equal deleted inserted replaced
8:2dc090ddb8af 9:92922182d423
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
10 <expand macro="references"/> 10 <expand macro="references"/>
11 <expand macro="stdio"/> 11 <expand macro="stdio"/>
12 <expand macro="requirements"/> 12 <expand macro="requirements"/>
13 <command>FileInfo 13 <command detect_errors="aggressive"><![CDATA[FileInfo
14 14
15 #if $param_in: 15 #if $param_in:
16 -in $param_in 16 -in $param_in
17 #end if 17 #end if
18 #if $param_out: 18 #if $param_out:
45 #if $adv_opts.adv_opts_selector=='advanced': 45 #if $adv_opts.adv_opts_selector=='advanced':
46 #if $adv_opts.param_force: 46 #if $adv_opts.param_force:
47 -force 47 -force
48 #end if 48 #end if
49 #end if 49 #end if
50 </command> 50 ]]></command>
51 <inputs> 51 <inputs>
52 <param name="param_in" type="data" format="mzData,mzxml,mzml,dta,dta2d,mgf,featurexml,consensusxml,idxml,pepxml,fid,mzid,trafoxml,fasta" optional="False" label="input file" help="(-in) "/> 52 <param name="param_in" type="data" format="mzData,mzxml,mzml,dta,dta2d,mgf,featurexml,consensusxml,idxml,pepxml,fid,mzid,trafoxml,fasta" optional="False" label="input file" help="(-in) "/>
53 <param name="param_m" display="radio" type="boolean" truevalue="-m" falsevalue="" checked="false" optional="True" label="Show meta information about the whole experiment" help="(-m) "/> 53 <param name="param_m" display="radio" type="boolean" truevalue="-m" falsevalue="" checked="false" optional="True" label="Show meta information about the whole experiment" help="(-m) "/>
54 <param name="param_p" display="radio" type="boolean" truevalue="-p" falsevalue="" checked="false" optional="True" label="Shows data processing information" help="(-p) "/> 54 <param name="param_p" display="radio" type="boolean" truevalue="-p" falsevalue="" checked="false" optional="True" label="Shows data processing information" help="(-p) "/>
55 <param name="param_s" display="radio" type="boolean" truevalue="-s" falsevalue="" checked="false" optional="True" label="Computes a five-number statistics of intensities, qualities, and widths" help="(-s) "/> 55 <param name="param_s" display="radio" type="boolean" truevalue="-s" falsevalue="" checked="false" optional="True" label="Computes a five-number statistics of intensities, qualities, and widths" help="(-s) "/>
66 <data name="param_out_tsv" format="tabular"/> 66 <data name="param_out_tsv" format="tabular"/>
67 </outputs> 67 </outputs>
68 <help>Shows basic information about the file, such as data ranges and file type. 68 <help>Shows basic information about the file, such as data ranges and file type.
69 69
70 70
71 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_FileInfo.html</help> 71 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_FileInfo.html</help>
72 </tool> 72 </tool>