Mercurial > repos > galaxyp > openms_filemerger

comparison FileMerger.xml @ 9:7186f4354d84 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Fri, 17 May 2019 04:56:52 -0400
parents 3d5cda05df45
children 1dfc532aadd1
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8:a643701f5726 9:7186f4354d84
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
10 <expand macro="references"/> 10 <expand macro="references"/>
11 <expand macro="stdio"/> 11 <expand macro="stdio"/>
12 <expand macro="requirements"/> 12 <expand macro="requirements"/>
13 <command>FileMerger 13 <command detect_errors="aggressive"><![CDATA[FileMerger
14 14
15 -in 15 -in
16 #for token in $param_in: 16 #for token in $param_in:
17 $token 17 $token
18 #end for 18 #end for
59 #if $adv_opts.adv_opts_selector=='advanced': 59 #if $adv_opts.adv_opts_selector=='advanced':
60 #if $adv_opts.param_force: 60 #if $adv_opts.param_force:
61 -force 61 -force
62 #end if 62 #end if
63 #end if 63 #end if
64 </command> 64 ]]></command>
65 <inputs> 65 <inputs>
66 <param name="param_in" type="data" format="mzData,mzxml,mzml,dta,dta2d,mgf,featurexml,consensusxml,fid,traml,fasta" multiple="true" optional="False" size="30" label="Input files separated by blank" help="(-in) "> 66 <param name="param_in" type="data" format="mzData,mzxml,mzml,dta,dta2d,mgf,featurexml,consensusxml,fid,traml,fasta" multiple="true" optional="False" size="30" label="Input files separated by blank" help="(-in) ">
67 <sanitizer> 67 <sanitizer>
68 <valid initial="string.printable"> 68 <valid initial="string.printable">
69 <remove value="'"/> 69 <remove value="'"/>
95 <data name="param_rt_concat_trafo_out" format="trafoxml"/> 95 <data name="param_rt_concat_trafo_out" format="trafoxml"/>
96 </outputs> 96 </outputs>
97 <help>Merges several MS files into one file. 97 <help>Merges several MS files into one file.
98 98
99 99
100 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_FileMerger.html</help> 100 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_FileMerger.html</help>
101 </tool> 101 </tool>