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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit ddf41e8bda1ba065f5cdec98e93dee8165ffc1b9"
author galaxyp
date Thu, 27 Aug 2020 19:54:16 -0400
parents cabf2360876a
children ed9a839cbbda
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# seems not possible for 2.5 https://github.com/OpenMS/OpenMS/issues/4426
DigestorMotif

# deprecated https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/latest/html/UTILS_IDDecoyProbability.html
# https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/latest/html/a16242.html
IDDecoyProbability

# personal communication with author V. Bafna: 
# "InsPect is no longer maintained as there are many better tools including MS-GF+"
InspectAdapter

# licence? see https://github.com/bioconda/bioconda-recipes/issues/18953
#MSFraggerAdapter

# seems currently unusable https://github.com/OpenMS/OpenMS/pull/4443
OpenSwathDIAPreScoring

# https://github.com/OpenMS/OpenMS/issues/4550#issuecomment-594065727
ProteomicsLFQ

# https://github.com/OpenMS/OpenMS/issues/4401
InclusionExclusionListCreator
RTPredict
PTPredict