diff IDFilter.xml @ 9:ce9d29147d5b draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:18:36 -0400
parents 54be6743323c
children a050a685eea1
line wrap: on
line diff
--- a/IDFilter.xml	Tue Mar 20 14:48:01 2018 -0400
+++ b/IDFilter.xml	Wed May 15 08:18:36 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>IDFilter
+  <command detect_errors="aggressive"><![CDATA[IDFilter
 
 #if $param_in:
   -in $param_in
@@ -181,7 +181,7 @@
   -best:n_to_m_peptide_hits     "$adv_opts.param_best_n_to_m_peptide_hits"
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="idxml" optional="False" label="input file" help="(-in) "/>
     <param name="param_length" type="text" size="30" value=":" label="Keep only peptide hits with a sequence length in this range" help="(-length) ">
@@ -5381,5 +5381,5 @@
   <help>Filters results from protein or peptide identification engines based on different criteria.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_IDFilter.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_IDFilter.html</help>
 </tool>