Mercurial > repos > galaxyp > openms_idmapper

comparison IDMapper.xml @ 7:f9dbe4e67097 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 58476cadaaf10b494317a604ad81d41c2d15f29b
author galaxyp
date Mon, 12 Feb 2018 12:58:34 -0500
parents d92d43ce63ce
children d29bb4c9831e
comparison
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6:d92d43ce63ce 7:f9dbe4e67097
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version='1.0' encoding='UTF-8'?>
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
3 <!--Proposed Tool Section: [ID Processing]--> 3 <!--Proposed Tool Section: [ID Processing]-->
4 <tool id="IDMapper" name="IDMapper" version="2.2.0"> 4 <tool id="IDMapper" name="IDMapper" version="2.3.0">
5 <description>Assigns protein/peptide identifications to features or consensus features.</description> 5 <description>Assigns protein/peptide identifications to features or consensus features.</description>
6 <macros> 6 <macros>
7 <token name="@EXECUTABLE@">IDMapper</token> 7 <token name="@EXECUTABLE@">IDMapper</token>
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
89 <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/> 89 <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
90 <param name="param_consensus_annotate_ids_with_subelements" display="radio" type="boolean" truevalue="-consensus:annotate_ids_with_subelements" falsevalue="" checked="false" optional="True" label="Store the map index of the sub-feature in the peptide ID" help="(-annotate_ids_with_subelements) "/> 90 <param name="param_consensus_annotate_ids_with_subelements" display="radio" type="boolean" truevalue="-consensus:annotate_ids_with_subelements" falsevalue="" checked="false" optional="True" label="Store the map index of the sub-feature in the peptide ID" help="(-annotate_ids_with_subelements) "/>
91 </expand> 91 </expand>
92 </inputs> 92 </inputs>
93 <outputs> 93 <outputs>
94 <data name="param_out" metadata_source="param_in" format_source="param_in"/> 94 <data name="param_out" metadata_source="param_in" format_source="param_in" />
95 </outputs> 95 </outputs>
96 <help>Assigns protein/peptide identifications to features or consensus features. 96 <help>Assigns protein/peptide identifications to features or consensus features.
97 97
98 98
99 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_IDMapper.html</help> 99 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_IDMapper.html</help>