Mercurial > repos > galaxyp > openms_isobaricanalyzer

comparison IsobaricAnalyzer.xml @ 7:7d2ed325f2e5 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 07:56:58 -0400
parents edb972ad2c81
children d52e76ea2c11
comparison
equal deleted inserted replaced
6:4555b2965a82 7:7d2ed325f2e5
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
10 <expand macro="references"/> 10 <expand macro="references"/>
11 <expand macro="stdio"/> 11 <expand macro="stdio"/>
12 <expand macro="requirements"/> 12 <expand macro="requirements"/>
13 <command>IsobaricAnalyzer 13 <command detect_errors="aggressive"><![CDATA[IsobaricAnalyzer
14 14
15 #if $param_type: 15 #if $param_type:
16 -type 16 -type
17 #if " " in str($param_type): 17 #if " " in str($param_type):
18 "$param_type" 18 "$param_type"
282 #else 282 #else
283 $adv_opts.param_extraction_purity_interpolation 283 $adv_opts.param_extraction_purity_interpolation
284 #end if 284 #end if
285 #end if 285 #end if
286 #end if 286 #end if
287 </command> 287 ]]></command>
288 <inputs> 288 <inputs>
289 <param name="param_type" type="select" optional="False" value="itraq4plex" label="Isobaric Quantitation method used in the experiment" help="(-type) "> 289 <param name="param_type" type="select" optional="False" value="itraq4plex" label="Isobaric Quantitation method used in the experiment" help="(-type) ">
290 <option value="itraq4plex" selected="true">itraq4plex</option> 290 <option value="itraq4plex" selected="true">itraq4plex</option>
291 <option value="itraq8plex">itraq8plex</option> 291 <option value="itraq8plex">itraq8plex</option>
292 <option value="tmt10plex">tmt10plex</option> 292 <option value="tmt10plex">tmt10plex</option>
734 <data name="param_out" format="consensusxml"/> 734 <data name="param_out" format="consensusxml"/>
735 </outputs> 735 </outputs>
736 <help>Calculates isobaric quantitative values for peptides 736 <help>Calculates isobaric quantitative values for peptides
737 737
738 738
739 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_IsobaricAnalyzer.html</help> 739 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_IsobaricAnalyzer.html</help>
740 </tool> 740 </tool>