Mercurial > repos > galaxyp > openms_maprttransformer

comparison MapRTTransformer.xml @ 11:88ac532206c7 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 19:48:32 +0000
parents fd6de4cdb9e9
children aec26bf377fb
comparison
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10:aa2bf9c53765 11:88ac532206c7
147 <expand macro="list_string_san"/> 147 <expand macro="list_string_san"/>
148 </param> 148 </param>
149 </section> 149 </section>
150 </section> 150 </section>
151 <expand macro="adv_opts_macro"> 151 <expand macro="adv_opts_macro">
152 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 152 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
153 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 153 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
154 <expand macro="list_string_san"/> 154 <expand macro="list_string_san"/>
155 </param> 155 </param>
156 </expand> 156 </expand>
157 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="false"> 157 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
158 <option value="out_FLAG">out (Type of extrapolation to apply: two-point-linear: use the first and last data point to build a single linear model, four-point-linear: build two linear models on both ends using the first two / last two points, global-linear: use all points to build a single linear model)</option> 158 <option value="out_FLAG">out (Output file (same file type as 'in'))</option>
159 <option value="trafo_out_FLAG">trafo_out (Type of extrapolation to apply: two-point-linear: use the first and last data point to build a single linear model, four-point-linear: build two linear models on both ends using the first two / last two points, global-linear: use all points to build a single linear model)</option> 159 <option value="trafo_out_FLAG">trafo_out (Transformation output file)</option>
160 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 160 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
161 </param> 161 </param>
162 </inputs> 162 </inputs>
163 <outputs> 163 <outputs>
164 <data name="out" label="${tool.name} on ${on_string}: out" format_source="in" metadata_source="in"> 164 <data name="out" label="${tool.name} on ${on_string}: out" format_source="in" metadata_source="in">
179 <expand macro="manutest_MapRTTransformer"/> 179 <expand macro="manutest_MapRTTransformer"/>
180 </tests> 180 </tests>
181 <help><![CDATA[Applies retention time transformations to maps. 181 <help><![CDATA[Applies retention time transformations to maps.
182 182
183 183
184 For more information, visit http://www.openms.de/documentation/TOPP_MapRTTransformer.html]]></help> 184 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_MapRTTransformer.html]]></help>
185 <expand macro="references"/> 185 <expand macro="references"/>
186 </tool> 186 </tool>