Mercurial > repos > galaxyp > openms_maraclusteradapter

comparison MaRaClusterAdapter.xml @ 2:2be8c63444db draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:03:38 +0000
parents c1f58afbc706
children f7195ee7e18d
comparison
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1:9edc02572ab9 2:2be8c63444db
68 <param name="precursor_tolerance_units" argument="-precursor_tolerance_units" display="radio" type="select" optional="false" label="tolerance_mass_units 0=ppm, 1=Da" help=""> 68 <param name="precursor_tolerance_units" argument="-precursor_tolerance_units" display="radio" type="select" optional="false" label="tolerance_mass_units 0=ppm, 1=Da" help="">
69 <option value="ppm" selected="true">ppm</option> 69 <option value="ppm" selected="true">ppm</option>
70 <option value="Da">Da</option> 70 <option value="Da">Da</option>
71 <expand macro="list_string_san"/> 71 <expand macro="list_string_san"/>
72 </param> 72 </param>
73 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 73 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
74 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 74 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
75 <expand macro="list_string_san"/> 75 <expand macro="list_string_san"/>
76 </param> 76 </param>
77 </expand> 77 </expand>
78 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="false"> 78 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
79 <option value="out_FLAG">out (Enables the test mode (needed for internal use only))</option> 79 <option value="out_FLAG">out (Output file in idXML format)</option>
80 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 80 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
81 </param> 81 </param>
82 </inputs> 82 </inputs>
83 <outputs> 83 <outputs>
84 <data name="out" label="${tool.name} on ${on_string}: out" format="idxml"> 84 <data name="out" label="${tool.name} on ${on_string}: out" format="idxml">
96 <expand macro="manutest_MaRaClusterAdapter"/> 96 <expand macro="manutest_MaRaClusterAdapter"/>
97 </tests> 97 </tests>
98 <help><![CDATA[Facilitate input to MaRaCluster and reintegrate. 98 <help><![CDATA[Facilitate input to MaRaCluster and reintegrate.
99 99
100 100
101 For more information, visit http://www.openms.de/documentation/TOPP_MaRaClusterAdapter.html]]></help> 101 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_MaRaClusterAdapter.html]]></help>
102 <expand macro="references"/> 102 <expand macro="references"/>
103 </tool> 103 </tool>