Mercurial > repos > galaxyp > openms_masscalculator

comparison MassCalculator.xml @ 1:7d95120eee87 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9a14ed1f2d3c9abdfb080251b3419dd9e0c52a14
author galaxyp
date Wed, 09 Aug 2017 10:02:01 -0400
parents ca71813dee8a
children 7db481946a90
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0:ca71813dee8a 1:7d95120eee87
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version='1.0' encoding='UTF-8'?>
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
3 <!--Proposed Tool Section: [Utilities]--> 3 <!--Proposed Tool Section: [Utilities]-->
4 <tool id="MassCalculator" name="MassCalculator" version="2.1.0"> 4 <tool id="MassCalculator" name="MassCalculator" version="2.2.0">
5 <description>Calculates masses and mass-to-charge ratios of peptide sequences</description> 5 <description>Calculates masses and mass-to-charge ratios of peptide sequences</description>
6 <macros> 6 <macros>
7 <token name="@EXECUTABLE@">MassCalculator</token> 7 <token name="@EXECUTABLE@">MassCalculator</token>
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
39 $token.param_charge 39 $token.param_charge
40 #end if 40 #end if
41 #end for 41 #end for
42 #end if 42 #end if
43 #if $param_format: 43 #if $param_format:
44 -format $param_format 44 -format
45 #if " " in str($param_format):
46 "$param_format"
47 #else
48 $param_format
49 #end if
45 #end if 50 #end if
46 #if $param_average_mass: 51 #if $param_average_mass:
47 -average_mass 52 -average_mass
48 #end if 53 #end if
49 #if $param_fragment_type: 54 #if $param_fragment_type:
50 -fragment_type $param_fragment_type 55 -fragment_type
56 #if " " in str($param_fragment_type):
57 "$param_fragment_type"
58 #else
59 $param_fragment_type
60 #end if
51 #end if 61 #end if
52 #if $param_separator: 62 #if $param_separator:
53 -separator "$param_separator" 63 -separator "$param_separator"
54 #end if 64 #end if
55 #if $adv_opts.adv_opts_selector=='advanced': 65 #if $adv_opts.adv_opts_selector=='advanced':