# HG changeset patch # User galaxyp # Date 1515712570 18000 # Node ID 7f545d44a4d972ed6374dbb57d68b80ebd0995b3 # Parent aebd61255bc8e1b7c196afa0e06e0a57eeb37498 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 8a95bc868914fb41c7452907f73a9273b03286ab diff -r aebd61255bc8 -r 7f545d44a4d9 readme.md --- a/readme.md Sat Oct 28 05:19:02 2017 -0400 +++ b/readme.md Thu Jan 11 18:16:10 2018 -0500 @@ -117,7 +117,14 @@ [...] ]]> ``` - + + * In Xtandem Converter and probably in others: + + ``` + #if str($param_missed_cleavages) != '': + ``` + This is because integers needs to be compared as string otherwise `0` becomes `false`. + * In `MetaProSIP.xml` add `R` as a requirement: ``` @@ -164,7 +171,8 @@ ``` - * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in Galaxy-stable and are therefore in `SKIP_TOOLS_FILES.txt`: + * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in + by the automatic conversion step and are therefore in `SKIP_TOOLS_FILES.txt`: * SeedListGenerator * SpecLibSearcher * MapAlignerIdentification