Mercurial > repos > galaxyp > openms_metaprosip

comparison MetaProSIP.xml @ 11:c18e6eb07aa9 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:29:53 +0000
parents 73c1493ac4c2
children 819ed5aae76f
comparison
equal deleted inserted replaced
10:d03467ead0fe 11:c18e6eb07aa9
98 <option value="correlation_maximum" selected="true">correlation_maximum</option> 98 <option value="correlation_maximum" selected="true">correlation_maximum</option>
99 <option value="decomposition_maximum">decomposition_maximum</option> 99 <option value="decomposition_maximum">decomposition_maximum</option>
100 <expand macro="list_string_san"/> 100 <expand macro="list_string_san"/>
101 </param> 101 </param>
102 <param name="lowRIA_correlation_threshold" argument="-lowRIA_correlation_threshold" type="float" optional="true" value="-1.0" label="Correlation threshold for reporting low RIA patterns" help="Disable and take correlation_threshold value for negative values"/> 102 <param name="lowRIA_correlation_threshold" argument="-lowRIA_correlation_threshold" type="float" optional="true" value="-1.0" label="Correlation threshold for reporting low RIA patterns" help="Disable and take correlation_threshold value for negative values"/>
103 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 103 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
104 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 104 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
105 <expand macro="list_string_san"/> 105 <expand macro="list_string_san"/>
106 </param> 106 </param>
107 </expand> 107 </expand>
108 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 108 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
109 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 109 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
110 </param> 110 </param>
111 </inputs> 111 </inputs>
112 <outputs> 112 <outputs>
113 <data name="out_csv" label="${tool.name} on ${on_string}: out_csv" format="csv"/> 113 <data name="out_csv" label="${tool.name} on ${on_string}: out_csv" format="csv"/>
121 <expand macro="manutest_MetaProSIP"/> 121 <expand macro="manutest_MetaProSIP"/>
122 </tests> 122 </tests>
123 <help><![CDATA[Performs proteinSIP on peptide features for elemental flux analysis. 123 <help><![CDATA[Performs proteinSIP on peptide features for elemental flux analysis.
124 124
125 125
126 For more information, visit http://www.openms.de/documentation/UTILS_MetaProSIP.html]]></help> 126 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/UTILS_MetaProSIP.html]]></help>
127 <expand macro="references"/> 127 <expand macro="references"/>
128 </tool> 128 </tool>