Mercurial > repos > galaxyp > openms_mssimulator

comparison MSSimulator.xml @ 7:d7cddde5703a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Fri, 17 May 2019 04:45:12 -0400
parents 66f0ddeb23f3
children 98bb49e7b5ba
comparison
equal deleted inserted replaced
6:e8f47f874cae 7:d7cddde5703a
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
10 <expand macro="references"/> 10 <expand macro="references"/>
11 <expand macro="stdio"/> 11 <expand macro="stdio"/>
12 <expand macro="requirements"/> 12 <expand macro="requirements"/>
13 <command>MSSimulator 13 <command detect_errors="aggressive"><![CDATA[MSSimulator
14 14
15 -in 15 -in
16 #for token in $param_in: 16 #for token in $param_in:
17 $token 17 $token
18 #end for 18 #end for
613 $token.param_algorithm_MSSim_Labeling_itraq_isotope_correction_values_8plex 613 $token.param_algorithm_MSSim_Labeling_itraq_isotope_correction_values_8plex
614 #end if 614 #end if
615 #end for 615 #end for
616 #end if 616 #end if
617 #end if 617 #end if
618 </command> 618 ]]></command>
619 <inputs> 619 <inputs>
620 <param name="param_in" type="data" format="fasta" multiple="true" optional="False" size="30" label="Input protein sequences" help="(-in) "> 620 <param name="param_in" type="data" format="fasta" multiple="true" optional="False" size="30" label="Input protein sequences" help="(-in) ">
621 <sanitizer> 621 <sanitizer>
622 <valid initial="string.printable"> 622 <valid initial="string.printable">
623 <remove value="'"/> 623 <remove value="'"/>
1023 <data name="param_out_id" format="idxml"/> 1023 <data name="param_out_id" format="idxml"/>
1024 </outputs> 1024 </outputs>
1025 <help>A highly configurable simulator for mass spectrometry experiments. 1025 <help>A highly configurable simulator for mass spectrometry experiments.
1026 1026
1027 1027
1028 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_MSSimulator.html</help> 1028 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_MSSimulator.html</help>
1029 </tool> 1029 </tool>