# HG changeset patch # User galaxyp # Date 1515712683 18000 # Node ID 0480462adc36f857377c37cb5b270475edf52cd0 # Parent 0b6c969bc55edee3ba1f99b7664de8d8099a78ca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 8a95bc868914fb41c7452907f73a9273b03286ab diff -r 0b6c969bc55e -r 0480462adc36 readme.md --- a/readme.md Sat Oct 28 05:17:32 2017 -0400 +++ b/readme.md Thu Jan 11 18:18:03 2018 -0500 @@ -117,7 +117,14 @@ [...] ]]> ``` - + + * In Xtandem Converter and probably in others: + + ``` + #if str($param_missed_cleavages) != '': + ``` + This is because integers needs to be compared as string otherwise `0` becomes `false`. + * In `MetaProSIP.xml` add `R` as a requirement: ``` @@ -164,7 +171,8 @@ ``` - * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in Galaxy-stable and are therefore in `SKIP_TOOLS_FILES.txt`: + * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in + by the automatic conversion step and are therefore in `SKIP_TOOLS_FILES.txt`: * SeedListGenerator * SpecLibSearcher * MapAlignerIdentification