Mercurial > repos > galaxyp > openms_omssaadapter
diff OMSSAAdapter.xml @ 2:886991df53f7 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
| author | galaxyp |
|---|---|
| date | Tue, 13 Oct 2020 20:08:38 +0000 |
| parents | 62795cdea5ea |
| children | 1672e6be33d3 |
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--- a/OMSSAAdapter.xml Thu Sep 24 12:17:02 2020 +0000 +++ b/OMSSAAdapter.xml Tue Oct 13 20:08:38 2020 +0000 @@ -84,6 +84,7 @@ <option value="Acetyl (K)">Acetyl (K)</option> <option value="Acetyl (N-term)">Acetyl (N-term)</option> <option value="Acetyl (Protein N-term)">Acetyl (Protein N-term)</option> + <option value="Acetyl (R)">Acetyl (R)</option> <option value="Acetyl (S)">Acetyl (S)</option> <option value="Acetyl (T)">Acetyl (T)</option> <option value="Acetyl (Y)">Acetyl (Y)</option> @@ -115,6 +116,7 @@ <option value="AEC-MAEC (T)">AEC-MAEC (T)</option> <option value="AEC-MAEC:2H(4) (S)">AEC-MAEC:2H(4) (S)</option> <option value="AEC-MAEC:2H(4) (T)">AEC-MAEC:2H(4) (T)</option> + <option value="AFB1_Dialdehyde (K)">AFB1_Dialdehyde (K)</option> <option value="AHA-Alkyne (M)">AHA-Alkyne (M)</option> <option value="AHA-Alkyne-KDDDD (M)">AHA-Alkyne-KDDDD (M)</option> <option value="AHA-SS (M)">AHA-SS (M)</option> @@ -217,7 +219,9 @@ <option value="Asp->Tyr (D)">Asp->Tyr (D)</option> <option value="Asp->Val (D)">Asp->Val (D)</option> <option value="Asp->Xle (D)">Asp->Xle (D)</option> + <option value="Aspartylurea (H)">Aspartylurea (H)</option> <option value="Atto495Maleimide (C)">Atto495Maleimide (C)</option> + <option value="AzidoF (F)">AzidoF (F)</option> <option value="azole (C)">azole (C)</option> <option value="azole (S)">azole (S)</option> <option value="Bacillosamine (N)">Bacillosamine (N)</option> @@ -227,11 +231,17 @@ <option value="BDMAPP (Protein N-term)">BDMAPP (Protein N-term)</option> <option value="BDMAPP (W)">BDMAPP (W)</option> <option value="BDMAPP (Y)">BDMAPP (Y)</option> + <option value="BEMAD_C (C)">BEMAD_C (C)</option> + <option value="BEMAD_C:2H(6) (C)">BEMAD_C:2H(6) (C)</option> + <option value="BEMAD_ST (S)">BEMAD_ST (S)</option> + <option value="BEMAD_ST (T)">BEMAD_ST (T)</option> + <option value="BEMAD_ST:2H(6) (S)">BEMAD_ST:2H(6) (S)</option> + <option value="BEMAD_ST:2H(6) (T)">BEMAD_ST:2H(6) (T)</option> <option value="Benzoyl (K)">Benzoyl (K)</option> <option value="Benzoyl (N-term)">Benzoyl (N-term)</option> <option value="benzylguanidine (K)">benzylguanidine (K)</option> - <option value="beta FNA (C)">beta FNA (C)</option> - <option value="beta FNA (K)">beta FNA (K)</option> + <option value="betaFNA (C)">betaFNA (C)</option> + <option value="betaFNA (K)">betaFNA (K)</option> <option value="BHT (C)">BHT (C)</option> <option value="BHT (H)">BHT (H)</option> <option value="BHT (K)">BHT (K)</option> @@ -254,6 +264,8 @@ <option value="Biotin:Invitrogen-M1602 (C)">Biotin:Invitrogen-M1602 (C)</option> <option value="Biotin:Sigma-B1267 (C)">Biotin:Sigma-B1267 (C)</option> <option value="Biotin:Thermo-21325 (K)">Biotin:Thermo-21325 (K)</option> + <option value="Biotin:Thermo-21328 (K)">Biotin:Thermo-21328 (K)</option> + <option value="Biotin:Thermo-21328 (N-term)">Biotin:Thermo-21328 (N-term)</option> <option value="Biotin:Thermo-21330 (K)">Biotin:Thermo-21330 (K)</option> <option value="Biotin:Thermo-21330 (N-term)">Biotin:Thermo-21330 (N-term)</option> <option value="Biotin:Thermo-21345 (Q)">Biotin:Thermo-21345 (Q)</option> @@ -277,7 +289,6 @@ <option value="BITC (C)">BITC (C)</option> <option value="BITC (K)">BITC (K)</option> <option value="BITC (N-term)">BITC (N-term)</option> - <option value="BMOE (C)">BMOE (C)</option> <option value="BMP-piperidinol (C)">BMP-piperidinol (C)</option> <option value="BMP-piperidinol (M)">BMP-piperidinol (M)</option> <option value="Bodipy (C)">Bodipy (C)</option> @@ -302,6 +313,7 @@ <option value="Carbamidomethyl (E)">Carbamidomethyl (E)</option> <option value="Carbamidomethyl (H)">Carbamidomethyl (H)</option> <option value="Carbamidomethyl (K)">Carbamidomethyl (K)</option> + <option value="Carbamidomethyl (M)">Carbamidomethyl (M)</option> <option value="Carbamidomethyl (N-term)">Carbamidomethyl (N-term)</option> <option value="Carbamidomethyl (S)">Carbamidomethyl (S)</option> <option value="Carbamidomethyl (T)">Carbamidomethyl (T)</option> @@ -318,6 +330,14 @@ <option value="Carbamyl (T)">Carbamyl (T)</option> <option value="Carbamyl (Y)">Carbamyl (Y)</option> <option value="Carbofuran (S)">Carbofuran (S)</option> + <option value="Carbonyl (A)">Carbonyl (A)</option> + <option value="Carbonyl (E)">Carbonyl (E)</option> + <option value="Carbonyl (I)">Carbonyl (I)</option> + <option value="Carbonyl (L)">Carbonyl (L)</option> + <option value="Carbonyl (Q)">Carbonyl (Q)</option> + <option value="Carbonyl (R)">Carbonyl (R)</option> + <option value="Carbonyl (S)">Carbonyl (S)</option> + <option value="Carbonyl (V)">Carbonyl (V)</option> <option value="Carboxy (D)">Carboxy (D)</option> <option value="Carboxy (E)">Carboxy (E)</option> <option value="Carboxy (K)">Carboxy (K)</option> @@ -338,6 +358,9 @@ <option value="Cation:Ag (C-term)">Cation:Ag (C-term)</option> <option value="Cation:Ag (D)">Cation:Ag (D)</option> <option value="Cation:Ag (E)">Cation:Ag (E)</option> + <option value="Cation:Al[III] (C-term)">Cation:Al[III] (C-term)</option> + <option value="Cation:Al[III] (D)">Cation:Al[III] (D)</option> + <option value="Cation:Al[III] (E)">Cation:Al[III] (E)</option> <option value="Cation:Ca[II] (C-term)">Cation:Ca[II] (C-term)</option> <option value="Cation:Ca[II] (D)">Cation:Ca[II] (D)</option> <option value="Cation:Ca[II] (E)">Cation:Ca[II] (E)</option> @@ -348,6 +371,9 @@ <option value="Cation:Fe[II] (C-term)">Cation:Fe[II] (C-term)</option> <option value="Cation:Fe[II] (D)">Cation:Fe[II] (D)</option> <option value="Cation:Fe[II] (E)">Cation:Fe[II] (E)</option> + <option value="Cation:Fe[III] (C-term)">Cation:Fe[III] (C-term)</option> + <option value="Cation:Fe[III] (D)">Cation:Fe[III] (D)</option> + <option value="Cation:Fe[III] (E)">Cation:Fe[III] (E)</option> <option value="Cation:K (C-term)">Cation:K (C-term)</option> <option value="Cation:K (D)">Cation:K (D)</option> <option value="Cation:K (E)">Cation:K (E)</option> @@ -372,11 +398,10 @@ <option value="cGMP+RMP-loss (C)">cGMP+RMP-loss (C)</option> <option value="cGMP+RMP-loss (S)">cGMP+RMP-loss (S)</option> <option value="CHDH (D)">CHDH (D)</option> + <option value="Chlorination (W)">Chlorination (W)</option> <option value="Chlorination (Y)">Chlorination (Y)</option> - <option value="Chlorpyrifos (S)">Chlorpyrifos (S)</option> - <option value="Chlorpyrifos (T)">Chlorpyrifos (T)</option> - <option value="Chlorpyrifos (Y)">Chlorpyrifos (Y)</option> <option value="Cholesterol (Protein C-term)">Cholesterol (Protein C-term)</option> + <option value="CIGG (K)">CIGG (K)</option> <option value="CLIP_TRAQ_2 (K)">CLIP_TRAQ_2 (K)</option> <option value="CLIP_TRAQ_2 (N-term)">CLIP_TRAQ_2 (N-term)</option> <option value="CLIP_TRAQ_2 (Y)">CLIP_TRAQ_2 (Y)</option> @@ -687,6 +712,8 @@ <option value="Deamidated:18O(1) (Q)">Deamidated:18O(1) (Q)</option> <option value="Decanoyl (S)">Decanoyl (S)</option> <option value="Decanoyl (T)">Decanoyl (T)</option> + <option value="Decarboxylation (D)">Decarboxylation (D)</option> + <option value="Decarboxylation (E)">Decarboxylation (E)</option> <option value="DEDGFLYMVYASQETFG (K)">DEDGFLYMVYASQETFG (K)</option> <option value="Dehydrated (D)">Dehydrated (D)</option> <option value="Dehydrated (N-term C)">Dehydrated (N-term C)</option> @@ -696,7 +723,10 @@ <option value="Dehydrated (T)">Dehydrated (T)</option> <option value="Dehydrated (Y)">Dehydrated (Y)</option> <option value="Dehydro (C)">Dehydro (C)</option> + <option value="Delta:H(-4)O(2) (W)">Delta:H(-4)O(2) (W)</option> + <option value="Delta:H(-4)O(3) (W)">Delta:H(-4)O(3) (W)</option> <option value="Delta:H(1)N(-1)18O(1) (N)">Delta:H(1)N(-1)18O(1) (N)</option> + <option value="Delta:H(10)C(8)O(1) (K)">Delta:H(10)C(8)O(1) (K)</option> <option value="Delta:H(2)C(2) (H)">Delta:H(2)C(2) (H)</option> <option value="Delta:H(2)C(2) (K)">Delta:H(2)C(2) (K)</option> <option value="Delta:H(2)C(2) (N-term)">Delta:H(2)C(2) (N-term)</option> @@ -705,6 +735,7 @@ <option value="Delta:H(2)C(3)O(1) (K)">Delta:H(2)C(3)O(1) (K)</option> <option value="Delta:H(2)C(3)O(1) (R)">Delta:H(2)C(3)O(1) (R)</option> <option value="Delta:H(2)C(5) (K)">Delta:H(2)C(5) (K)</option> + <option value="Delta:H(3)C(3)O(2) (K)">Delta:H(3)C(3)O(2) (K)</option> <option value="Delta:H(4)C(2) (H)">Delta:H(4)C(2) (H)</option> <option value="Delta:H(4)C(2) (K)">Delta:H(4)C(2) (K)</option> <option value="Delta:H(4)C(2) (N-term)">Delta:H(4)C(2) (N-term)</option> @@ -715,6 +746,8 @@ <option value="Delta:H(4)C(3)O(1) (C)">Delta:H(4)C(3)O(1) (C)</option> <option value="Delta:H(4)C(3)O(1) (H)">Delta:H(4)C(3)O(1) (H)</option> <option value="Delta:H(4)C(3)O(1) (K)">Delta:H(4)C(3)O(1) (K)</option> + <option value="Delta:H(4)C(3)O(1) (R)">Delta:H(4)C(3)O(1) (R)</option> + <option value="Delta:H(4)C(5)O(1) (R)">Delta:H(4)C(5)O(1) (R)</option> <option value="Delta:H(4)C(6) (K)">Delta:H(4)C(6) (K)</option> <option value="Delta:H(5)C(2) (P)">Delta:H(5)C(2) (P)</option> <option value="Delta:H(6)C(3)O(1) (C)">Delta:H(6)C(3)O(1) (C)</option> @@ -722,10 +755,12 @@ <option value="Delta:H(6)C(3)O(1) (K)">Delta:H(6)C(3)O(1) (K)</option> <option value="Delta:H(6)C(3)O(1) (Protein N-term)">Delta:H(6)C(3)O(1) (Protein N-term)</option> <option value="Delta:H(6)C(6)O(1) (K)">Delta:H(6)C(6)O(1) (K)</option> + <option value="Delta:H(6)C(7)O(4) (R)">Delta:H(6)C(7)O(4) (R)</option> <option value="Delta:H(8)C(6)O(1) (K)">Delta:H(8)C(6)O(1) (K)</option> <option value="Delta:H(8)C(6)O(1) (Protein N-term)">Delta:H(8)C(6)O(1) (Protein N-term)</option> <option value="Delta:H(8)C(6)O(2) (K)">Delta:H(8)C(6)O(2) (K)</option> <option value="Delta:Hg(1) (C)">Delta:Hg(1) (C)</option> + <option value="Delta:O(4) (W)">Delta:O(4) (W)</option> <option value="Delta:S(-1)Se(1) (C)">Delta:S(-1)Se(1) (C)</option> <option value="Delta:S(-1)Se(1) (M)">Delta:S(-1)Se(1) (M)</option> <option value="Delta:Se(1) (C)">Delta:Se(1) (C)</option> @@ -736,10 +771,6 @@ <option value="Deoxyhypusine (Q)">Deoxyhypusine (Q)</option> <option value="DeStreak (C)">DeStreak (C)</option> <option value="Dethiomethyl (M)">Dethiomethyl (M)</option> - <option value="DFDNB (K)">DFDNB (K)</option> - <option value="DFDNB (N)">DFDNB (N)</option> - <option value="DFDNB (Q)">DFDNB (Q)</option> - <option value="DFDNB (R)">DFDNB (R)</option> <option value="dHex (N)">dHex (N)</option> <option value="dHex (S)">dHex (S)</option> <option value="dHex (T)">dHex (T)</option> @@ -761,8 +792,6 @@ <option value="dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T)">dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T)</option> <option value="dHex(1)Hex(1)HexNAc(2)NeuAc(2) (S)">dHex(1)Hex(1)HexNAc(2)NeuAc(2) (S)</option> <option value="dHex(1)Hex(1)HexNAc(2)NeuAc(2) (T)">dHex(1)Hex(1)HexNAc(2)NeuAc(2) (T)</option> - <option value="dHex(1)Hex(1)HexNAc(2)NeuGc(1) (S)">dHex(1)Hex(1)HexNAc(2)NeuGc(1) (S)</option> - <option value="dHex(1)Hex(1)HexNAc(2)NeuGc(1) (T)">dHex(1)Hex(1)HexNAc(2)NeuGc(1) (T)</option> <option value="dHex(1)Hex(1)HexNAc(2)Sulf(1) (S)">dHex(1)Hex(1)HexNAc(2)Sulf(1) (S)</option> <option value="dHex(1)Hex(1)HexNAc(2)Sulf(1) (T)">dHex(1)Hex(1)HexNAc(2)Sulf(1) (T)</option> <option value="dHex(1)Hex(1)HexNAc(3) (S)">dHex(1)Hex(1)HexNAc(3) (S)</option> @@ -789,6 +818,8 @@ <option value="dHex(1)Hex(2)HexA(1)HexNAc(2) (T)">dHex(1)Hex(2)HexA(1)HexNAc(2) (T)</option> <option value="dHex(1)Hex(2)HexNAc(1) (S)">dHex(1)Hex(2)HexNAc(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(1) (T)">dHex(1)Hex(2)HexNAc(1) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(1)NeuAc(2) (S)">dHex(1)Hex(2)HexNAc(1)NeuAc(2) (S)</option> + <option value="dHex(1)Hex(2)HexNAc(1)NeuAc(2) (T)">dHex(1)Hex(2)HexNAc(1)NeuAc(2) (T)</option> <option value="dHex(1)Hex(2)HexNAc(1)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(1)Sulf(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(1)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(1)Sulf(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)</option> @@ -797,6 +828,7 @@ <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(2) (T)">dHex(1)Hex(2)HexNAc(2)NeuAc(2) (T)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(1) (N)">dHex(1)Hex(2)HexNAc(2)NeuGc(1) (N)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(1) (S)">dHex(1)Hex(2)HexNAc(2)NeuGc(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(1) (T)">dHex(1)Hex(2)HexNAc(2)NeuGc(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(2) (S)">dHex(1)Hex(2)HexNAc(2)NeuGc(2) (S)</option> @@ -815,12 +847,15 @@ <option value="dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(3)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(3)Sulf(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(3)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(3)Sulf(1) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(4) (N)">dHex(1)Hex(2)HexNAc(4) (N)</option> <option value="dHex(1)Hex(2)HexNAc(4) (S)">dHex(1)Hex(2)HexNAc(4) (S)</option> <option value="dHex(1)Hex(2)HexNAc(4) (T)">dHex(1)Hex(2)HexNAc(4) (T)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(1) (S)">dHex(1)Hex(2)HexNAc(4)NeuAc(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(1) (T)">dHex(1)Hex(2)HexNAc(4)NeuAc(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(2) (S)">dHex(1)Hex(2)HexNAc(4)NeuAc(2) (S)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(2) (T)">dHex(1)Hex(2)HexNAc(4)NeuAc(2) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(4)Sulf(2) (S)">dHex(1)Hex(2)HexNAc(4)Sulf(2) (S)</option> + <option value="dHex(1)Hex(2)HexNAc(4)Sulf(2) (T)">dHex(1)Hex(2)HexNAc(4)Sulf(2) (T)</option> <option value="dHex(1)Hex(3) (S)">dHex(1)Hex(3) (S)</option> <option value="dHex(1)Hex(3) (T)">dHex(1)Hex(3) (T)</option> <option value="dHex(1)Hex(3)HexA(1)HexNAc(1) (S)">dHex(1)Hex(3)HexA(1)HexNAc(1) (S)</option> @@ -879,6 +914,8 @@ <option value="dHex(1)Hex(3)HexNAc(6)Sulf(1) (N)">dHex(1)Hex(3)HexNAc(6)Sulf(1) (N)</option> <option value="dHex(1)Hex(4) (S)">dHex(1)Hex(4) (S)</option> <option value="dHex(1)Hex(4) (T)">dHex(1)Hex(4) (T)</option> + <option value="dHex(1)Hex(4)HexA(1) (S)">dHex(1)Hex(4)HexA(1) (S)</option> + <option value="dHex(1)Hex(4)HexA(1) (T)">dHex(1)Hex(4)HexA(1) (T)</option> <option value="dHex(1)Hex(4)HexA(1)HexNAc(2) (S)">dHex(1)Hex(4)HexA(1)HexNAc(2) (S)</option> <option value="dHex(1)Hex(4)HexA(1)HexNAc(2) (T)">dHex(1)Hex(4)HexA(1)HexNAc(2) (T)</option> <option value="dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S)">dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S)</option> @@ -890,6 +927,8 @@ <option value="dHex(1)Hex(4)HexNAc(2)Pent(1) (N)">dHex(1)Hex(4)HexNAc(2)Pent(1) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3) (N)">dHex(1)Hex(4)HexNAc(3) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1) (N)">dHex(1)Hex(4)HexNAc(3)NeuAc(1) (N)</option> + <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1) (S)">dHex(1)Hex(4)HexNAc(3)NeuAc(1) (S)</option> + <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1) (T)">dHex(1)Hex(4)HexNAc(3)NeuAc(1) (T)</option> <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N)">dHex(1)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3)NeuGc(1) (N)">dHex(1)Hex(4)HexNAc(3)NeuGc(1) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3)Pent(1) (N)">dHex(1)Hex(4)HexNAc(3)Pent(1) (N)</option> @@ -936,6 +975,7 @@ <option value="dHex(1)Hex(7)HexNAc(3)Phos(1) (N)">dHex(1)Hex(7)HexNAc(3)Phos(1) (N)</option> <option value="dHex(1)Hex(7)HexNAc(3)Sulf(1) (N)">dHex(1)Hex(7)HexNAc(3)Sulf(1) (N)</option> <option value="dHex(1)Hex(7)HexNAc(4) (N)">dHex(1)Hex(7)HexNAc(4) (N)</option> + <option value="dHex(1)Hex(8)HexNAc(2) (N)">dHex(1)Hex(8)HexNAc(2) (N)</option> <option value="dHex(1)HexNAc(3) (S)">dHex(1)HexNAc(3) (S)</option> <option value="dHex(1)HexNAc(3) (T)">dHex(1)HexNAc(3) (T)</option> <option value="dHex(1)HexNAc(4) (S)">dHex(1)HexNAc(4) (S)</option> @@ -952,6 +992,8 @@ <option value="dHex(2)Hex(1)HexNAc(2)NeuGc(1) (T)">dHex(2)Hex(1)HexNAc(2)NeuGc(1) (T)</option> <option value="dHex(2)Hex(1)HexNAc(3) (S)">dHex(2)Hex(1)HexNAc(3) (S)</option> <option value="dHex(2)Hex(1)HexNAc(3) (T)">dHex(2)Hex(1)HexNAc(3) (T)</option> + <option value="dHex(2)Hex(1)HexNAc(4)Sulf(1) (S)">dHex(2)Hex(1)HexNAc(4)Sulf(1) (S)</option> + <option value="dHex(2)Hex(1)HexNAc(4)Sulf(1) (T)">dHex(2)Hex(1)HexNAc(4)Sulf(1) (T)</option> <option value="dHex(2)Hex(2) (S)">dHex(2)Hex(2) (S)</option> <option value="dHex(2)Hex(2) (T)">dHex(2)Hex(2) (T)</option> <option value="dHex(2)Hex(2)HexA(1) (S)">dHex(2)Hex(2)HexA(1) (S)</option> @@ -988,8 +1030,12 @@ <option value="dHex(2)Hex(2)HexNAc(3)Sulf(1) (T)">dHex(2)Hex(2)HexNAc(3)Sulf(1) (T)</option> <option value="dHex(2)Hex(2)HexNAc(4) (S)">dHex(2)Hex(2)HexNAc(4) (S)</option> <option value="dHex(2)Hex(2)HexNAc(4) (T)">dHex(2)Hex(2)HexNAc(4) (T)</option> + <option value="dHex(2)Hex(2)HexNAc(4)Sulf(2) (S)">dHex(2)Hex(2)HexNAc(4)Sulf(2) (S)</option> + <option value="dHex(2)Hex(2)HexNAc(4)Sulf(2) (T)">dHex(2)Hex(2)HexNAc(4)Sulf(2) (T)</option> <option value="dHex(2)Hex(2)HexNAc(5) (S)">dHex(2)Hex(2)HexNAc(5) (S)</option> <option value="dHex(2)Hex(2)HexNAc(5) (T)">dHex(2)Hex(2)HexNAc(5) (T)</option> + <option value="dHex(2)Hex(2)HexNAc(6)Sulf(1) (S)">dHex(2)Hex(2)HexNAc(6)Sulf(1) (S)</option> + <option value="dHex(2)Hex(2)HexNAc(6)Sulf(1) (T)">dHex(2)Hex(2)HexNAc(6)Sulf(1) (T)</option> <option value="dHex(2)Hex(3) (S)">dHex(2)Hex(3) (S)</option> <option value="dHex(2)Hex(3) (T)">dHex(2)Hex(3) (T)</option> <option value="dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S)">dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S)</option> @@ -1014,15 +1060,17 @@ <option value="dHex(2)Hex(3)HexNAc(3)NeuAc(1) (T)">dHex(2)Hex(3)HexNAc(3)NeuAc(1) (T)</option> <option value="dHex(2)Hex(3)HexNAc(3)NeuAc(2) (S)">dHex(2)Hex(3)HexNAc(3)NeuAc(2) (S)</option> <option value="dHex(2)Hex(3)HexNAc(3)NeuAc(2) (T)">dHex(2)Hex(3)HexNAc(3)NeuAc(2) (T)</option> - <option value="dHex(2)Hex(3)HexNAc(3)NeuGc(1) (S)">dHex(2)Hex(3)HexNAc(3)NeuGc(1) (S)</option> - <option value="dHex(2)Hex(3)HexNAc(3)NeuGc(1) (T)">dHex(2)Hex(3)HexNAc(3)NeuGc(1) (T)</option> <option value="dHex(2)Hex(3)HexNAc(3)Pent(1) (N)">dHex(2)Hex(3)HexNAc(3)Pent(1) (N)</option> <option value="dHex(2)Hex(3)HexNAc(3)Pent(2) (N)">dHex(2)Hex(3)HexNAc(3)Pent(2) (N)</option> + <option value="dHex(2)Hex(3)HexNAc(3)Sulf(1) (S)">dHex(2)Hex(3)HexNAc(3)Sulf(1) (S)</option> + <option value="dHex(2)Hex(3)HexNAc(3)Sulf(1) (T)">dHex(2)Hex(3)HexNAc(3)Sulf(1) (T)</option> <option value="dHex(2)Hex(3)HexNAc(4) (N)">dHex(2)Hex(3)HexNAc(4) (N)</option> <option value="dHex(2)Hex(3)HexNAc(4) (S)">dHex(2)Hex(3)HexNAc(4) (S)</option> <option value="dHex(2)Hex(3)HexNAc(4) (T)">dHex(2)Hex(3)HexNAc(4) (T)</option> + <option value="dHex(2)Hex(3)HexNAc(4)NeuAc(1) (N)">dHex(2)Hex(3)HexNAc(4)NeuAc(1) (N)</option> <option value="dHex(2)Hex(3)HexNAc(4)Pent(1) (N)">dHex(2)Hex(3)HexNAc(4)Pent(1) (N)</option> <option value="dHex(2)Hex(3)HexNAc(4)Pent(2) (N)">dHex(2)Hex(3)HexNAc(4)Pent(2) (N)</option> + <option value="dHex(2)Hex(3)HexNAc(5) (N)">dHex(2)Hex(3)HexNAc(5) (N)</option> <option value="dHex(2)Hex(3)HexNAc(5) (S)">dHex(2)Hex(3)HexNAc(5) (S)</option> <option value="dHex(2)Hex(3)HexNAc(5) (T)">dHex(2)Hex(3)HexNAc(5) (T)</option> <option value="dHex(2)Hex(3)HexNAc(6) (N)">dHex(2)Hex(3)HexNAc(6) (N)</option> @@ -1046,6 +1094,8 @@ <option value="dHex(2)Hex(4)HexNAc(5) (N)">dHex(2)Hex(4)HexNAc(5) (N)</option> <option value="dHex(2)Hex(4)HexNAc(5) (S)">dHex(2)Hex(4)HexNAc(5) (S)</option> <option value="dHex(2)Hex(4)HexNAc(5) (T)">dHex(2)Hex(4)HexNAc(5) (T)</option> + <option value="dHex(2)Hex(5)HexNAc(2)Me(1) (S)">dHex(2)Hex(5)HexNAc(2)Me(1) (S)</option> + <option value="dHex(2)Hex(5)HexNAc(2)Me(1) (T)">dHex(2)Hex(5)HexNAc(2)Me(1) (T)</option> <option value="dHex(2)Hex(5)HexNAc(3)Pent(1) (N)">dHex(2)Hex(5)HexNAc(3)Pent(1) (N)</option> <option value="dHex(2)Hex(5)HexNAc(4) (N)">dHex(2)Hex(5)HexNAc(4) (N)</option> <option value="dHex(2)HexNAc(2)Kdn(1) (S)">dHex(2)HexNAc(2)Kdn(1) (S)</option> @@ -1070,6 +1120,12 @@ <option value="dHex(3)Hex(2)HexNAc(3)Kdn(1) (T)">dHex(3)Hex(2)HexNAc(3)Kdn(1) (T)</option> <option value="dHex(3)Hex(2)HexNAc(4) (S)">dHex(3)Hex(2)HexNAc(4) (S)</option> <option value="dHex(3)Hex(2)HexNAc(4) (T)">dHex(3)Hex(2)HexNAc(4) (T)</option> + <option value="dHex(3)Hex(2)HexNAc(4)Sulf(2) (S)">dHex(3)Hex(2)HexNAc(4)Sulf(2) (S)</option> + <option value="dHex(3)Hex(2)HexNAc(4)Sulf(2) (T)">dHex(3)Hex(2)HexNAc(4)Sulf(2) (T)</option> + <option value="dHex(3)Hex(3)HexNAc(1) (S)">dHex(3)Hex(3)HexNAc(1) (S)</option> + <option value="dHex(3)Hex(3)HexNAc(1) (T)">dHex(3)Hex(3)HexNAc(1) (T)</option> + <option value="dHex(3)Hex(3)HexNAc(2) (S)">dHex(3)Hex(3)HexNAc(2) (S)</option> + <option value="dHex(3)Hex(3)HexNAc(2) (T)">dHex(3)Hex(3)HexNAc(2) (T)</option> <option value="dHex(3)Hex(3)HexNAc(3) (S)">dHex(3)Hex(3)HexNAc(3) (S)</option> <option value="dHex(3)Hex(3)HexNAc(3) (T)">dHex(3)Hex(3)HexNAc(3) (T)</option> <option value="dHex(3)Hex(3)HexNAc(3)NeuAc(1) (S)">dHex(3)Hex(3)HexNAc(3)NeuAc(1) (S)</option> @@ -1093,6 +1149,8 @@ <option value="dHex(4)Hex(2)HexNAc(2)Kdn(1) (T)">dHex(4)Hex(2)HexNAc(2)Kdn(1) (T)</option> <option value="dHex(4)Hex(2)HexNAc(3) (S)">dHex(4)Hex(2)HexNAc(3) (S)</option> <option value="dHex(4)Hex(2)HexNAc(3) (T)">dHex(4)Hex(2)HexNAc(3) (T)</option> + <option value="dHex(4)Hex(3)HexNAc(2)NeuAc(1) (S)">dHex(4)Hex(3)HexNAc(2)NeuAc(1) (S)</option> + <option value="dHex(4)Hex(3)HexNAc(2)NeuAc(1) (T)">dHex(4)Hex(3)HexNAc(2)NeuAc(1) (T)</option> <option value="dHex(4)Hex(3)HexNAc(3) (S)">dHex(4)Hex(3)HexNAc(3) (S)</option> <option value="dHex(4)Hex(3)HexNAc(3) (T)">dHex(4)Hex(3)HexNAc(3) (T)</option> <option value="dHex(4)HexNAc(3)Kdn(1) (S)">dHex(4)HexNAc(3)Kdn(1) (S)</option> @@ -1141,6 +1199,12 @@ <option value="Diethylphosphate (S)">Diethylphosphate (S)</option> <option value="Diethylphosphate (T)">Diethylphosphate (T)</option> <option value="Diethylphosphate (Y)">Diethylphosphate (Y)</option> + <option value="Diethylphosphothione (C)">Diethylphosphothione (C)</option> + <option value="Diethylphosphothione (H)">Diethylphosphothione (H)</option> + <option value="Diethylphosphothione (K)">Diethylphosphothione (K)</option> + <option value="Diethylphosphothione (S)">Diethylphosphothione (S)</option> + <option value="Diethylphosphothione (T)">Diethylphosphothione (T)</option> + <option value="Diethylphosphothione (Y)">Diethylphosphothione (Y)</option> <option value="Difuran (Y)">Difuran (Y)</option> <option value="Dihydroxyimidazolidine (R)">Dihydroxyimidazolidine (R)</option> <option value="Diiodo (H)">Diiodo (H)</option> @@ -1190,15 +1254,26 @@ <option value="Dimethyl:2H(6)13C(2) (Protein N-term)">Dimethyl:2H(6)13C(2) (Protein N-term)</option> <option value="Dimethyl:2H(6)13C(2) (R)">Dimethyl:2H(6)13C(2) (R)</option> <option value="DimethylamineGMBS (C)">DimethylamineGMBS (C)</option> + <option value="Dimethylaminoethyl (C)">Dimethylaminoethyl (C)</option> <option value="DimethylArsino (C)">DimethylArsino (C)</option> + <option value="Dimethylphosphothione (C)">Dimethylphosphothione (C)</option> + <option value="Dimethylphosphothione (H)">Dimethylphosphothione (H)</option> + <option value="Dimethylphosphothione (K)">Dimethylphosphothione (K)</option> + <option value="Dimethylphosphothione (S)">Dimethylphosphothione (S)</option> + <option value="Dimethylphosphothione (T)">Dimethylphosphothione (T)</option> + <option value="Dimethylphosphothione (Y)">Dimethylphosphothione (Y)</option> <option value="DimethylpyrroleAdduct (K)">DimethylpyrroleAdduct (K)</option> <option value="Dioxidation (C)">Dioxidation (C)</option> + <option value="Dioxidation (E)">Dioxidation (E)</option> <option value="Dioxidation (F)">Dioxidation (F)</option> + <option value="Dioxidation (I)">Dioxidation (I)</option> <option value="Dioxidation (K)">Dioxidation (K)</option> + <option value="Dioxidation (L)">Dioxidation (L)</option> <option value="Dioxidation (M)">Dioxidation (M)</option> <option value="Dioxidation (P)">Dioxidation (P)</option> <option value="Dioxidation (R)">Dioxidation (R)</option> <option value="Dioxidation (U)">Dioxidation (U)</option> + <option value="Dioxidation (V)">Dioxidation (V)</option> <option value="Dioxidation (W)">Dioxidation (W)</option> <option value="Dioxidation (Y)">Dioxidation (Y)</option> <option value="Diphthamide (H)">Diphthamide (H)</option> @@ -1215,18 +1290,9 @@ <option value="dNIC (N-term)">dNIC (N-term)</option> <option value="DNPS (C)">DNPS (C)</option> <option value="DNPS (W)">DNPS (W)</option> - <option value="DTBP (K)">DTBP (K)</option> - <option value="DTBP (N)">DTBP (N)</option> - <option value="DTBP (Protein N-term)">DTBP (Protein N-term)</option> - <option value="DTBP (Q)">DTBP (Q)</option> - <option value="DTBP (R)">DTBP (R)</option> - <option value="DTT_C (C)">DTT_C (C)</option> - <option value="DTT_C:2H(6) (C)">DTT_C:2H(6) (C)</option> - <option value="DTT_ST (S)">DTT_ST (S)</option> - <option value="DTT_ST (T)">DTT_ST (T)</option> - <option value="DTT_ST:2H(6) (S)">DTT_ST:2H(6) (S)</option> - <option value="DTT_ST:2H(6) (T)">DTT_ST:2H(6) (T)</option> + <option value="DTT (C)">DTT (C)</option> <option value="DyLight-maleimide (C)">DyLight-maleimide (C)</option> + <option value="DYn-2 (C)">DYn-2 (C)</option> <option value="EDEDTIDVFQQQTGG (K)">EDEDTIDVFQQQTGG (K)</option> <option value="EDT-iodoacetyl-PEO-biotin (S)">EDT-iodoacetyl-PEO-biotin (S)</option> <option value="EDT-iodoacetyl-PEO-biotin (T)">EDT-iodoacetyl-PEO-biotin (T)</option> @@ -1295,6 +1361,7 @@ <option value="Formyl (Protein N-term)">Formyl (Protein N-term)</option> <option value="Formyl (S)">Formyl (S)</option> <option value="Formyl (T)">Formyl (T)</option> + <option value="Formylasparagine (H)">Formylasparagine (H)</option> <option value="FormylMet (Protein N-term)">FormylMet (Protein N-term)</option> <option value="FP-Biotin (K)">FP-Biotin (K)</option> <option value="FP-Biotin (S)">FP-Biotin (S)</option> @@ -1313,6 +1380,7 @@ <option value="GeranylGeranyl (C)">GeranylGeranyl (C)</option> <option value="GG (C)">GG (C)</option> <option value="GG (K)">GG (K)</option> + <option value="GG (Protein N-term)">GG (Protein N-term)</option> <option value="GG (S)">GG (S)</option> <option value="GG (T)">GG (T)</option> <option value="GGQ (K)">GGQ (K)</option> @@ -1379,6 +1447,7 @@ <option value="GluGluGlu (Protein C-term)">GluGluGlu (Protein C-term)</option> <option value="GluGluGluGlu (E)">GluGluGluGlu (E)</option> <option value="GluGluGluGlu (Protein C-term)">GluGluGluGlu (Protein C-term)</option> + <option value="Gluratylation (K)">Gluratylation (K)</option> <option value="Glutathione (C)">Glutathione (C)</option> <option value="Gly (K)">Gly (K)</option> <option value="Gly (S)">Gly (S)</option> @@ -1407,9 +1476,17 @@ <option value="glycidamide (K)">glycidamide (K)</option> <option value="glycidamide (N-term)">glycidamide (N-term)</option> <option value="Glycosyl (P)">Glycosyl (P)</option> + <option value="glyoxalAGE (R)">glyoxalAGE (R)</option> + <option value="GNLLFLACYCIGG (K)">GNLLFLACYCIGG (K)</option> <option value="GPIanchor (Protein C-term)">GPIanchor (Protein C-term)</option> <option value="Guanidinyl (K)">Guanidinyl (K)</option> <option value="Guanidinyl (N-term)">Guanidinyl (N-term)</option> + <option value="Haloxon (C)">Haloxon (C)</option> + <option value="Haloxon (H)">Haloxon (H)</option> + <option value="Haloxon (K)">Haloxon (K)</option> + <option value="Haloxon (S)">Haloxon (S)</option> + <option value="Haloxon (T)">Haloxon (T)</option> + <option value="Haloxon (Y)">Haloxon (Y)</option> <option value="HCysteinyl (C)">HCysteinyl (C)</option> <option value="HCysThiolactone (K)">HCysThiolactone (K)</option> <option value="Heme (C)">Heme (C)</option> @@ -1489,6 +1566,8 @@ <option value="Hex(1)HexNAc(2)dHex(2) (N)">Hex(1)HexNAc(2)dHex(2) (N)</option> <option value="Hex(1)HexNAc(2)dHex(2) (S)">Hex(1)HexNAc(2)dHex(2) (S)</option> <option value="Hex(1)HexNAc(2)dHex(2) (T)">Hex(1)HexNAc(2)dHex(2) (T)</option> + <option value="Hex(1)HexNAc(2)dHex(2)Sulf(1) (S)">Hex(1)HexNAc(2)dHex(2)Sulf(1) (S)</option> + <option value="Hex(1)HexNAc(2)dHex(2)Sulf(1) (T)">Hex(1)HexNAc(2)dHex(2)Sulf(1) (T)</option> <option value="Hex(1)HexNAc(2)NeuAc(1) (S)">Hex(1)HexNAc(2)NeuAc(1) (S)</option> <option value="Hex(1)HexNAc(2)NeuAc(1) (T)">Hex(1)HexNAc(2)NeuAc(1) (T)</option> <option value="Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S)">Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S)</option> @@ -1512,6 +1591,8 @@ <option value="Hex(1)HexNAc(3)NeuGc(1) (T)">Hex(1)HexNAc(3)NeuGc(1) (T)</option> <option value="Hex(1)HexNAc(3)Sulf(1) (S)">Hex(1)HexNAc(3)Sulf(1) (S)</option> <option value="Hex(1)HexNAc(3)Sulf(1) (T)">Hex(1)HexNAc(3)Sulf(1) (T)</option> + <option value="Hex(1)HexNAc(4)dHex(1)Sulf(1) (S)">Hex(1)HexNAc(4)dHex(1)Sulf(1) (S)</option> + <option value="Hex(1)HexNAc(4)dHex(1)Sulf(1) (T)">Hex(1)HexNAc(4)dHex(1)Sulf(1) (T)</option> <option value="Hex(1)NeuAc(1) (S)">Hex(1)NeuAc(1) (S)</option> <option value="Hex(1)NeuAc(1) (T)">Hex(1)NeuAc(1) (T)</option> <option value="Hex(1)NeuAc(1)Pent(1) (S)">Hex(1)NeuAc(1)Pent(1) (S)</option> @@ -1522,16 +1603,26 @@ <option value="Hex(1)Pent(1) (T)">Hex(1)Pent(1) (T)</option> <option value="Hex(1)Pent(2) (S)">Hex(1)Pent(2) (S)</option> <option value="Hex(1)Pent(2) (T)">Hex(1)Pent(2) (T)</option> + <option value="Hex(1)Pent(2)Me(1) (S)">Hex(1)Pent(2)Me(1) (S)</option> + <option value="Hex(1)Pent(2)Me(1) (T)">Hex(1)Pent(2)Me(1) (T)</option> + <option value="Hex(1)Pent(3) (S)">Hex(1)Pent(3) (S)</option> + <option value="Hex(1)Pent(3) (T)">Hex(1)Pent(3) (T)</option> + <option value="Hex(1)Pent(3)Me(1) (S)">Hex(1)Pent(3)Me(1) (S)</option> + <option value="Hex(1)Pent(3)Me(1) (T)">Hex(1)Pent(3)Me(1) (T)</option> + <option value="Hex(10)HexNAc(1) (N)">Hex(10)HexNAc(1) (N)</option> <option value="Hex(10)Phos(3) (S)">Hex(10)Phos(3) (S)</option> <option value="Hex(10)Phos(3) (T)">Hex(10)Phos(3) (T)</option> <option value="Hex(2) (K)">Hex(2) (K)</option> <option value="Hex(2) (R)">Hex(2) (R)</option> + <option value="Hex(2) (S)">Hex(2) (S)</option> + <option value="Hex(2) (T)">Hex(2) (T)</option> <option value="Hex(2)HexA(1)HexNAc(1)Sulf(1) (S)">Hex(2)HexA(1)HexNAc(1)Sulf(1) (S)</option> <option value="Hex(2)HexA(1)HexNAc(1)Sulf(1) (T)">Hex(2)HexA(1)HexNAc(1)Sulf(1) (T)</option> <option value="Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (S)">Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (S)</option> <option value="Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (T)">Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (T)</option> <option value="Hex(2)HexA(1)Pent(1)Sulf(1) (S)">Hex(2)HexA(1)Pent(1)Sulf(1) (S)</option> <option value="Hex(2)HexA(1)Pent(1)Sulf(1) (T)">Hex(2)HexA(1)Pent(1)Sulf(1) (T)</option> + <option value="Hex(2)HexNAc(1) (N)">Hex(2)HexNAc(1) (N)</option> <option value="Hex(2)HexNAc(1) (S)">Hex(2)HexNAc(1) (S)</option> <option value="Hex(2)HexNAc(1) (T)">Hex(2)HexNAc(1) (T)</option> <option value="Hex(2)HexNAc(1)Me(1) (S)">Hex(2)HexNAc(1)Me(1) (S)</option> @@ -1544,6 +1635,8 @@ <option value="Hex(2)HexNAc(1)NeuGc(3) (T)">Hex(2)HexNAc(1)NeuGc(3) (T)</option> <option value="Hex(2)HexNAc(1)NeuGc(4) (S)">Hex(2)HexNAc(1)NeuGc(4) (S)</option> <option value="Hex(2)HexNAc(1)NeuGc(4) (T)">Hex(2)HexNAc(1)NeuGc(4) (T)</option> + <option value="Hex(2)HexNAc(1)Pent(1)HexA(1) (S)">Hex(2)HexNAc(1)Pent(1)HexA(1) (S)</option> + <option value="Hex(2)HexNAc(1)Pent(1)HexA(1) (T)">Hex(2)HexNAc(1)Pent(1)HexA(1) (T)</option> <option value="Hex(2)HexNAc(1)Sulf(1) (S)">Hex(2)HexNAc(1)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(1)Sulf(1) (T)">Hex(2)HexNAc(1)Sulf(1) (T)</option> <option value="Hex(2)HexNAc(2) (N)">Hex(2)HexNAc(2) (N)</option> @@ -1553,6 +1646,8 @@ <option value="Hex(2)HexNAc(2)dHex(1) (S)">Hex(2)HexNAc(2)dHex(1) (S)</option> <option value="Hex(2)HexNAc(2)dHex(1) (T)">Hex(2)HexNAc(2)dHex(1) (T)</option> <option value="Hex(2)HexNAc(2)NeuAc(1) (N)">Hex(2)HexNAc(2)NeuAc(1) (N)</option> + <option value="Hex(2)HexNAc(2)NeuAc(1) (S)">Hex(2)HexNAc(2)NeuAc(1) (S)</option> + <option value="Hex(2)HexNAc(2)NeuAc(1) (T)">Hex(2)HexNAc(2)NeuAc(1) (T)</option> <option value="Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)">Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T)">Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T)</option> <option value="Hex(2)HexNAc(2)NeuAc(2) (S)">Hex(2)HexNAc(2)NeuAc(2) (S)</option> @@ -1564,6 +1659,7 @@ <option value="Hex(2)HexNAc(2)Pent(1) (N)">Hex(2)HexNAc(2)Pent(1) (N)</option> <option value="Hex(2)HexNAc(2)Sulf(1) (S)">Hex(2)HexNAc(2)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(2)Sulf(1) (T)">Hex(2)HexNAc(2)Sulf(1) (T)</option> + <option value="Hex(2)HexNAc(3) (N)">Hex(2)HexNAc(3) (N)</option> <option value="Hex(2)HexNAc(3) (S)">Hex(2)HexNAc(3) (S)</option> <option value="Hex(2)HexNAc(3) (T)">Hex(2)HexNAc(3) (T)</option> <option value="Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (S)">Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (S)</option> @@ -1582,6 +1678,7 @@ <option value="Hex(2)HexNAc(3)NeuGc(3) (T)">Hex(2)HexNAc(3)NeuGc(3) (T)</option> <option value="Hex(2)HexNAc(3)Sulf(1) (S)">Hex(2)HexNAc(3)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(3)Sulf(1) (T)">Hex(2)HexNAc(3)Sulf(1) (T)</option> + <option value="Hex(2)HexNAc(4) (N)">Hex(2)HexNAc(4) (N)</option> <option value="Hex(2)HexNAc(4) (S)">Hex(2)HexNAc(4) (S)</option> <option value="Hex(2)HexNAc(4) (T)">Hex(2)HexNAc(4) (T)</option> <option value="Hex(2)HexNAc(4)NeuAc(1) (S)">Hex(2)HexNAc(4)NeuAc(1) (S)</option> @@ -1590,11 +1687,20 @@ <option value="Hex(2)HexNAc(5) (T)">Hex(2)HexNAc(5) (T)</option> <option value="Hex(2)NeuAc(1) (S)">Hex(2)NeuAc(1) (S)</option> <option value="Hex(2)NeuAc(1) (T)">Hex(2)NeuAc(1) (T)</option> + <option value="Hex(2)Pent(2) (S)">Hex(2)Pent(2) (S)</option> + <option value="Hex(2)Pent(2) (T)">Hex(2)Pent(2) (T)</option> + <option value="Hex(2)Pent(2)Me(1) (S)">Hex(2)Pent(2)Me(1) (S)</option> + <option value="Hex(2)Pent(2)Me(1) (T)">Hex(2)Pent(2)Me(1) (T)</option> + <option value="Hex(2)Sulf(1) (S)">Hex(2)Sulf(1) (S)</option> + <option value="Hex(2)Sulf(1) (T)">Hex(2)Sulf(1) (T)</option> <option value="Hex(3) (N)">Hex(3) (N)</option> <option value="Hex(3) (S)">Hex(3) (S)</option> <option value="Hex(3) (T)">Hex(3) (T)</option> + <option value="Hex(3)HexNAc(1) (N)">Hex(3)HexNAc(1) (N)</option> <option value="Hex(3)HexNAc(1) (S)">Hex(3)HexNAc(1) (S)</option> <option value="Hex(3)HexNAc(1) (T)">Hex(3)HexNAc(1) (T)</option> + <option value="Hex(3)HexNAc(1)HexA(1) (S)">Hex(3)HexNAc(1)HexA(1) (S)</option> + <option value="Hex(3)HexNAc(1)HexA(1) (T)">Hex(3)HexNAc(1)HexA(1) (T)</option> <option value="Hex(3)HexNAc(1)Me(1) (S)">Hex(3)HexNAc(1)Me(1) (S)</option> <option value="Hex(3)HexNAc(1)Me(1) (T)">Hex(3)HexNAc(1)Me(1) (T)</option> <option value="Hex(3)HexNAc(1)Pent(1) (N)">Hex(3)HexNAc(1)Pent(1) (N)</option> @@ -1617,22 +1723,27 @@ <option value="Hex(3)HexNAc(3)NeuAc(2) (T)">Hex(3)HexNAc(3)NeuAc(2) (T)</option> <option value="Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (S)">Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (S)</option> <option value="Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (T)">Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (T)</option> + <option value="Hex(3)HexNAc(3)NeuAc(3) (S)">Hex(3)HexNAc(3)NeuAc(3) (S)</option> + <option value="Hex(3)HexNAc(3)NeuAc(3) (T)">Hex(3)HexNAc(3)NeuAc(3) (T)</option> <option value="Hex(3)HexNAc(3)NeuGc(1) (S)">Hex(3)HexNAc(3)NeuGc(1) (S)</option> <option value="Hex(3)HexNAc(3)NeuGc(1) (T)">Hex(3)HexNAc(3)NeuGc(1) (T)</option> <option value="Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (S)">Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (S)</option> <option value="Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (T)">Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (T)</option> <option value="Hex(3)HexNAc(3)Pent(1) (N)">Hex(3)HexNAc(3)Pent(1) (N)</option> + <option value="Hex(3)HexNAc(3)Sulf(1) (N)">Hex(3)HexNAc(3)Sulf(1) (N)</option> <option value="Hex(3)HexNAc(3)Sulf(1) (S)">Hex(3)HexNAc(3)Sulf(1) (S)</option> <option value="Hex(3)HexNAc(3)Sulf(1) (T)">Hex(3)HexNAc(3)Sulf(1) (T)</option> <option value="Hex(3)HexNAc(4) (N)">Hex(3)HexNAc(4) (N)</option> <option value="Hex(3)HexNAc(4) (S)">Hex(3)HexNAc(4) (S)</option> <option value="Hex(3)HexNAc(4) (T)">Hex(3)HexNAc(4) (T)</option> <option value="Hex(3)HexNAc(4)NeuAc(1) (N)">Hex(3)HexNAc(4)NeuAc(1) (N)</option> + <option value="Hex(3)HexNAc(4)NeuAc(2) (N)">Hex(3)HexNAc(4)NeuAc(2) (N)</option> <option value="Hex(3)HexNAc(4)Pent(1) (N)">Hex(3)HexNAc(4)Pent(1) (N)</option> <option value="Hex(3)HexNAc(4)Sulf(1) (N)">Hex(3)HexNAc(4)Sulf(1) (N)</option> <option value="Hex(3)HexNAc(5) (N)">Hex(3)HexNAc(5) (N)</option> <option value="Hex(3)HexNAc(5) (S)">Hex(3)HexNAc(5) (S)</option> <option value="Hex(3)HexNAc(5) (T)">Hex(3)HexNAc(5) (T)</option> + <option value="Hex(3)HexNAc(5)NeuAc(1) (N)">Hex(3)HexNAc(5)NeuAc(1) (N)</option> <option value="Hex(3)HexNAc(5)Sulf(1) (N)">Hex(3)HexNAc(5)Sulf(1) (N)</option> <option value="Hex(3)HexNAc(6) (N)">Hex(3)HexNAc(6) (N)</option> <option value="Hex(3)HexNAc(6) (S)">Hex(3)HexNAc(6) (S)</option> @@ -1642,14 +1753,19 @@ <option value="Hex(3)HexNAc(6)Sulf(2) (N)">Hex(3)HexNAc(6)Sulf(2) (N)</option> <option value="Hex(3)HexNAc(7) (N)">Hex(3)HexNAc(7) (N)</option> <option value="Hex(3)HexNAc(7)Sulf(1) (N)">Hex(3)HexNAc(7)Sulf(1) (N)</option> - <option value="Hex(3)Phos(1) (S)">Hex(3)Phos(1) (S)</option> - <option value="Hex(3)Phos(1) (T)">Hex(3)Phos(1) (T)</option> <option value="Hex(4) (S)">Hex(4) (S)</option> <option value="Hex(4) (T)">Hex(4) (T)</option> + <option value="Hex(4)HexA(1) (S)">Hex(4)HexA(1) (S)</option> + <option value="Hex(4)HexA(1) (T)">Hex(4)HexA(1) (T)</option> + <option value="Hex(4)HexA(1)HexNAc(1) (S)">Hex(4)HexA(1)HexNAc(1) (S)</option> + <option value="Hex(4)HexA(1)HexNAc(1) (T)">Hex(4)HexA(1)HexNAc(1) (T)</option> + <option value="Hex(4)HexNAc(1) (N)">Hex(4)HexNAc(1) (N)</option> <option value="Hex(4)HexNAc(1) (S)">Hex(4)HexNAc(1) (S)</option> <option value="Hex(4)HexNAc(1) (T)">Hex(4)HexNAc(1) (T)</option> <option value="Hex(4)HexNAc(2) (N)">Hex(4)HexNAc(2) (N)</option> <option value="Hex(4)HexNAc(2)NeuAc(1) (N)">Hex(4)HexNAc(2)NeuAc(1) (N)</option> + <option value="Hex(4)HexNAc(2)NeuAc(1) (S)">Hex(4)HexNAc(2)NeuAc(1) (S)</option> + <option value="Hex(4)HexNAc(2)NeuAc(1) (T)">Hex(4)HexNAc(2)NeuAc(1) (T)</option> <option value="Hex(4)HexNAc(2)Pent(1) (N)">Hex(4)HexNAc(2)Pent(1) (N)</option> <option value="Hex(4)HexNAc(3) (N)">Hex(4)HexNAc(3) (N)</option> <option value="Hex(4)HexNAc(3) (S)">Hex(4)HexNAc(3) (S)</option> @@ -1671,6 +1787,9 @@ <option value="Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (T)">Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (T)</option> <option value="Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (S)">Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (S)</option> <option value="Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (T)">Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (T)</option> + <option value="Hex(4)HexNAc(4)NeuGc(1) (N)">Hex(4)HexNAc(4)NeuGc(1) (N)</option> + <option value="Hex(4)HexNAc(4)NeuGc(1) (S)">Hex(4)HexNAc(4)NeuGc(1) (S)</option> + <option value="Hex(4)HexNAc(4)NeuGc(1) (T)">Hex(4)HexNAc(4)NeuGc(1) (T)</option> <option value="Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (S)">Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (S)</option> <option value="Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (T)">Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (T)</option> <option value="Hex(4)HexNAc(4)Pent(1) (N)">Hex(4)HexNAc(4)Pent(1) (N)</option> @@ -1685,6 +1804,9 @@ <option value="Hex(4)Phos(1) (T)">Hex(4)Phos(1) (T)</option> <option value="Hex(5) (S)">Hex(5) (S)</option> <option value="Hex(5) (T)">Hex(5) (T)</option> + <option value="Hex(5)HexA(1) (S)">Hex(5)HexA(1) (S)</option> + <option value="Hex(5)HexA(1) (T)">Hex(5)HexA(1) (T)</option> + <option value="Hex(5)HexNAc(1) (N)">Hex(5)HexNAc(1) (N)</option> <option value="Hex(5)HexNAc(1) (S)">Hex(5)HexNAc(1) (S)</option> <option value="Hex(5)HexNAc(1) (T)">Hex(5)HexNAc(1) (T)</option> <option value="Hex(5)HexNAc(2) (N)">Hex(5)HexNAc(2) (N)</option> @@ -1696,6 +1818,8 @@ <option value="Hex(5)HexNAc(4) (T)">Hex(5)HexNAc(4) (T)</option> <option value="Hex(5)HexNAc(4)Me(2)Pent(1) (N)">Hex(5)HexNAc(4)Me(2)Pent(1) (N)</option> <option value="Hex(5)HexNAc(4)NeuAc(1) (N)">Hex(5)HexNAc(4)NeuAc(1) (N)</option> + <option value="Hex(5)HexNAc(4)NeuAc(1)Ac(1) (N)">Hex(5)HexNAc(4)NeuAc(1)Ac(1) (N)</option> + <option value="Hex(5)HexNAc(4)NeuAc(1)Ac(2) (N)">Hex(5)HexNAc(4)NeuAc(1)Ac(2) (N)</option> <option value="Hex(5)HexNAc(4)NeuAc(1)Sulf(1) (N)">Hex(5)HexNAc(4)NeuAc(1)Sulf(1) (N)</option> <option value="Hex(5)HexNAc(4)NeuAc(2) (N)">Hex(5)HexNAc(4)NeuAc(2) (N)</option> <option value="Hex(5)HexNAc(4)NeuGc(1) (N)">Hex(5)HexNAc(4)NeuGc(1) (N)</option> @@ -1707,6 +1831,7 @@ <option value="Hex(5)Phos(1) (T)">Hex(5)Phos(1) (T)</option> <option value="Hex(5)Phos(3) (S)">Hex(5)Phos(3) (S)</option> <option value="Hex(5)Phos(3) (T)">Hex(5)Phos(3) (T)</option> + <option value="Hex(6)HexNAc(1) (N)">Hex(6)HexNAc(1) (N)</option> <option value="Hex(6)HexNAc(2) (N)">Hex(6)HexNAc(2) (N)</option> <option value="Hex(6)HexNAc(2)Phos(1) (N)">Hex(6)HexNAc(2)Phos(1) (N)</option> <option value="Hex(6)HexNAc(3) (N)">Hex(6)HexNAc(3) (N)</option> @@ -1734,14 +1859,19 @@ <option value="Hex(8)HexNAc(2) (N)">Hex(8)HexNAc(2) (N)</option> <option value="Hex(8)Phos(3) (S)">Hex(8)Phos(3) (S)</option> <option value="Hex(8)Phos(3) (T)">Hex(8)Phos(3) (T)</option> + <option value="Hex(9) (N)">Hex(9) (N)</option> + <option value="Hex(9)HexNAc(1) (N)">Hex(9)HexNAc(1) (N)</option> <option value="Hex(9)HexNAc(2) (N)">Hex(9)HexNAc(2) (N)</option> <option value="Hex(9)Phos(3) (S)">Hex(9)Phos(3) (S)</option> <option value="Hex(9)Phos(3) (T)">Hex(9)Phos(3) (T)</option> + <option value="HexA(2)HexNAc(3) (S)">HexA(2)HexNAc(3) (S)</option> + <option value="HexA(2)HexNAc(3) (T)">HexA(2)HexNAc(3) (T)</option> <option value="HexN (K)">HexN (K)</option> <option value="HexN (N)">HexN (N)</option> <option value="HexN (S)">HexN (S)</option> <option value="HexN (T)">HexN (T)</option> <option value="HexN (W)">HexN (W)</option> + <option value="HexNAc (C)">HexNAc (C)</option> <option value="HexNAc (N)">HexNAc (N)</option> <option value="HexNAc (S)">HexNAc (S)</option> <option value="HexNAc (T)">HexNAc (T)</option> @@ -1768,6 +1898,8 @@ <option value="HexNAc(2)NeuAc(1)Sulf(1) (T)">HexNAc(2)NeuAc(1)Sulf(1) (T)</option> <option value="HexNAc(2)NeuGc(1) (S)">HexNAc(2)NeuGc(1) (S)</option> <option value="HexNAc(2)NeuGc(1) (T)">HexNAc(2)NeuGc(1) (T)</option> + <option value="HexNAc(2)Sulf(1) (S)">HexNAc(2)Sulf(1) (S)</option> + <option value="HexNAc(2)Sulf(1) (T)">HexNAc(2)Sulf(1) (T)</option> <option value="HexNAc(3) (S)">HexNAc(3) (S)</option> <option value="HexNAc(3) (T)">HexNAc(3) (T)</option> <option value="HexNAc(3)Sulf(1) (S)">HexNAc(3)Sulf(1) (S)</option> @@ -1822,6 +1954,7 @@ <option value="Hydroxycinnamyl (C)">Hydroxycinnamyl (C)</option> <option value="Hydroxyfarnesyl (C)">Hydroxyfarnesyl (C)</option> <option value="Hydroxyheme (E)">Hydroxyheme (E)</option> + <option value="hydroxyisobutyryl (K)">hydroxyisobutyryl (K)</option> <option value="Hydroxymethyl (N)">Hydroxymethyl (N)</option> <option value="HydroxymethylOP (K)">HydroxymethylOP (K)</option> <option value="Hydroxytrimethyl (K)">Hydroxytrimethyl (K)</option> @@ -1884,6 +2017,7 @@ <option value="Isopropylphospho (S)">Isopropylphospho (S)</option> <option value="Isopropylphospho (T)">Isopropylphospho (T)</option> <option value="Isopropylphospho (Y)">Isopropylphospho (Y)</option> + <option value="iTRAQ4plex (C)">iTRAQ4plex (C)</option> <option value="iTRAQ4plex (H)">iTRAQ4plex (H)</option> <option value="iTRAQ4plex (K)">iTRAQ4plex (K)</option> <option value="iTRAQ4plex (N-term)">iTRAQ4plex (N-term)</option> @@ -1891,12 +2025,15 @@ <option value="iTRAQ4plex (S)">iTRAQ4plex (S)</option> <option value="iTRAQ4plex (T)">iTRAQ4plex (T)</option> <option value="iTRAQ4plex (Y)">iTRAQ4plex (Y)</option> + <option value="iTRAQ4plex114 (C)">iTRAQ4plex114 (C)</option> <option value="iTRAQ4plex114 (K)">iTRAQ4plex114 (K)</option> <option value="iTRAQ4plex114 (N-term)">iTRAQ4plex114 (N-term)</option> <option value="iTRAQ4plex114 (Y)">iTRAQ4plex114 (Y)</option> + <option value="iTRAQ4plex115 (C)">iTRAQ4plex115 (C)</option> <option value="iTRAQ4plex115 (K)">iTRAQ4plex115 (K)</option> <option value="iTRAQ4plex115 (N-term)">iTRAQ4plex115 (N-term)</option> <option value="iTRAQ4plex115 (Y)">iTRAQ4plex115 (Y)</option> + <option value="iTRAQ8plex (C)">iTRAQ8plex (C)</option> <option value="iTRAQ8plex (H)">iTRAQ8plex (H)</option> <option value="iTRAQ8plex (K)">iTRAQ8plex (K)</option> <option value="iTRAQ8plex (N-term)">iTRAQ8plex (N-term)</option> @@ -1904,6 +2041,7 @@ <option value="iTRAQ8plex (S)">iTRAQ8plex (S)</option> <option value="iTRAQ8plex (T)">iTRAQ8plex (T)</option> <option value="iTRAQ8plex (Y)">iTRAQ8plex (Y)</option> + <option value="iTRAQ8plex:13C(6)15N(2) (C)">iTRAQ8plex:13C(6)15N(2) (C)</option> <option value="iTRAQ8plex:13C(6)15N(2) (K)">iTRAQ8plex:13C(6)15N(2) (K)</option> <option value="iTRAQ8plex:13C(6)15N(2) (N-term)">iTRAQ8plex:13C(6)15N(2) (N-term)</option> <option value="iTRAQ8plex:13C(6)15N(2) (Y)">iTRAQ8plex:13C(6)15N(2) (Y)</option> @@ -1973,8 +2111,10 @@ <option value="Label:2H(3) (L)">Label:2H(3) (L)</option> <option value="Label:2H(3) (M)">Label:2H(3) (M)</option> <option value="Label:2H(3)+Oxidation (M)">Label:2H(3)+Oxidation (M)</option> + <option value="Label:2H(4) (A)">Label:2H(4) (A)</option> <option value="Label:2H(4) (F)">Label:2H(4) (F)</option> <option value="Label:2H(4) (K)">Label:2H(4) (K)</option> + <option value="Label:2H(4) (U)">Label:2H(4) (U)</option> <option value="Label:2H(4) (Y)">Label:2H(4) (Y)</option> <option value="Label:2H(4)+Acetyl (K)">Label:2H(4)+Acetyl (K)</option> <option value="Label:2H(4)+GG (K)">Label:2H(4)+GG (K)</option> @@ -2033,19 +2173,25 @@ <option value="maleimide5 (C)">maleimide5 (C)</option> <option value="maleimide5 (K)">maleimide5 (K)</option> <option value="Malonyl (C)">Malonyl (C)</option> + <option value="Malonyl (K)">Malonyl (K)</option> <option value="Malonyl (S)">Malonyl (S)</option> <option value="MDCC (C)">MDCC (C)</option> + <option value="MeMePhosphorothioate (S)">MeMePhosphorothioate (S)</option> <option value="Menadione (C)">Menadione (C)</option> <option value="Menadione (K)">Menadione (K)</option> <option value="Menadione-HQ (C)">Menadione-HQ (C)</option> <option value="Menadione-HQ (K)">Menadione-HQ (K)</option> <option value="MercaptoEthanol (S)">MercaptoEthanol (S)</option> <option value="MercaptoEthanol (T)">MercaptoEthanol (T)</option> + <option value="MesitylOxide (H)">MesitylOxide (H)</option> + <option value="MesitylOxide (K)">MesitylOxide (K)</option> + <option value="MesitylOxide (Protein N-term)">MesitylOxide (Protein N-term)</option> <option value="Met->Aha (M)">Met->Aha (M)</option> <option value="Met->Ala (M)">Met->Ala (M)</option> <option value="Met->Arg (M)">Met->Arg (M)</option> <option value="Met->Asn (M)">Met->Asn (M)</option> <option value="Met->Asp (M)">Met->Asp (M)</option> + <option value="Met->AspSA (M)">Met->AspSA (M)</option> <option value="Met->Cys (M)">Met->Cys (M)</option> <option value="Met->Gln (M)">Met->Gln (M)</option> <option value="Met->Glu (M)">Met->Glu (M)</option> @@ -2065,6 +2211,18 @@ <option value="Met->Xle (M)">Met->Xle (M)</option> <option value="Met-loss (Protein N-term M)">Met-loss (Protein N-term M)</option> <option value="Met-loss+Acetyl (Protein N-term M)">Met-loss+Acetyl (Protein N-term M)</option> + <option value="Methamidophos-O (C)">Methamidophos-O (C)</option> + <option value="Methamidophos-O (H)">Methamidophos-O (H)</option> + <option value="Methamidophos-O (K)">Methamidophos-O (K)</option> + <option value="Methamidophos-O (S)">Methamidophos-O (S)</option> + <option value="Methamidophos-O (T)">Methamidophos-O (T)</option> + <option value="Methamidophos-O (Y)">Methamidophos-O (Y)</option> + <option value="Methamidophos-S (C)">Methamidophos-S (C)</option> + <option value="Methamidophos-S (H)">Methamidophos-S (H)</option> + <option value="Methamidophos-S (K)">Methamidophos-S (K)</option> + <option value="Methamidophos-S (S)">Methamidophos-S (S)</option> + <option value="Methamidophos-S (T)">Methamidophos-S (T)</option> + <option value="Methamidophos-S (Y)">Methamidophos-S (Y)</option> <option value="Methyl (C)">Methyl (C)</option> <option value="Methyl (C-term)">Methyl (C-term)</option> <option value="Methyl (D)">Methyl (D)</option> @@ -2113,6 +2271,9 @@ <option value="Methylamine (S)">Methylamine (S)</option> <option value="Methylamine (T)">Methylamine (T)</option> <option value="Methylmalonylation (S)">Methylmalonylation (S)</option> + <option value="methylol (K)">methylol (K)</option> + <option value="methylol (W)">methylol (W)</option> + <option value="methylol (Y)">methylol (Y)</option> <option value="Methylphosphonate (S)">Methylphosphonate (S)</option> <option value="Methylphosphonate (T)">Methylphosphonate (T)</option> <option value="Methylphosphonate (Y)">Methylphosphonate (Y)</option> @@ -2134,6 +2295,12 @@ <option value="MolybdopterinGD (D)">MolybdopterinGD (D)</option> <option value="MolybdopterinGD (U)">MolybdopterinGD (U)</option> <option value="MolybdopterinGD+Delta:S(-1)Se(1) (C)">MolybdopterinGD+Delta:S(-1)Se(1) (C)</option> + <option value="monomethylphosphothione (C)">monomethylphosphothione (C)</option> + <option value="monomethylphosphothione (H)">monomethylphosphothione (H)</option> + <option value="monomethylphosphothione (K)">monomethylphosphothione (K)</option> + <option value="monomethylphosphothione (S)">monomethylphosphothione (S)</option> + <option value="monomethylphosphothione (T)">monomethylphosphothione (T)</option> + <option value="monomethylphosphothione (Y)">monomethylphosphothione (Y)</option> <option value="mTRAQ (H)">mTRAQ (H)</option> <option value="mTRAQ (K)">mTRAQ (K)</option> <option value="mTRAQ (N-term)">mTRAQ (N-term)</option> @@ -2191,9 +2358,12 @@ <option value="NIC (K)">NIC (K)</option> <option value="NIC (N-term)">NIC (N-term)</option> <option value="NIPCAM (C)">NIPCAM (C)</option> + <option value="Nitrene (Y)">Nitrene (Y)</option> + <option value="Nitro (F)">Nitro (F)</option> <option value="Nitro (W)">Nitro (W)</option> <option value="Nitro (Y)">Nitro (Y)</option> <option value="Nitrosyl (C)">Nitrosyl (C)</option> + <option value="Nitrosyl (Y)">Nitrosyl (Y)</option> <option value="Nmethylmaleimide (C)">Nmethylmaleimide (C)</option> <option value="Nmethylmaleimide (K)">Nmethylmaleimide (K)</option> <option value="Nmethylmaleimide+water (C)">Nmethylmaleimide+water (C)</option> @@ -2225,14 +2395,21 @@ <option value="Oxidation (C)">Oxidation (C)</option> <option value="Oxidation (C-term G)">Oxidation (C-term G)</option> <option value="Oxidation (D)">Oxidation (D)</option> + <option value="Oxidation (E)">Oxidation (E)</option> <option value="Oxidation (F)">Oxidation (F)</option> <option value="Oxidation (H)">Oxidation (H)</option> + <option value="Oxidation (I)">Oxidation (I)</option> <option value="Oxidation (K)">Oxidation (K)</option> + <option value="Oxidation (L)">Oxidation (L)</option> <option value="Oxidation (M)">Oxidation (M)</option> <option value="Oxidation (N)">Oxidation (N)</option> <option value="Oxidation (P)">Oxidation (P)</option> + <option value="Oxidation (Q)">Oxidation (Q)</option> <option value="Oxidation (R)">Oxidation (R)</option> + <option value="Oxidation (S)">Oxidation (S)</option> + <option value="Oxidation (T)">Oxidation (T)</option> <option value="Oxidation (U)">Oxidation (U)</option> + <option value="Oxidation (V)">Oxidation (V)</option> <option value="Oxidation (W)">Oxidation (W)</option> <option value="Oxidation (Y)">Oxidation (Y)</option> <option value="Oxidation+NEM (C)">Oxidation+NEM (C)</option> @@ -2251,6 +2428,10 @@ <option value="PEITC (C)">PEITC (C)</option> <option value="PEITC (K)">PEITC (K)</option> <option value="PEITC (N-term)">PEITC (N-term)</option> + <option value="Pent(1)HexNAc(1) (S)">Pent(1)HexNAc(1) (S)</option> + <option value="Pent(1)HexNAc(1) (T)">Pent(1)HexNAc(1) (T)</option> + <option value="Pent(2) (S)">Pent(2) (S)</option> + <option value="Pent(2) (T)">Pent(2) (T)</option> <option value="Pentose (S)">Pentose (S)</option> <option value="Pentose (T)">Pentose (T)</option> <option value="Pentylamine (Q)">Pentylamine (Q)</option> @@ -2281,6 +2462,7 @@ <option value="phenylsulfonylethyl (C)">phenylsulfonylethyl (C)</option> <option value="Phospho (C)">Phospho (C)</option> <option value="Phospho (D)">Phospho (D)</option> + <option value="Phospho (E)">Phospho (E)</option> <option value="Phospho (H)">Phospho (H)</option> <option value="Phospho (K)">Phospho (K)</option> <option value="Phospho (R)">Phospho (R)</option> @@ -2291,6 +2473,9 @@ <option value="Phosphoadenosine (K)">Phosphoadenosine (K)</option> <option value="Phosphoadenosine (T)">Phosphoadenosine (T)</option> <option value="Phosphoadenosine (Y)">Phosphoadenosine (Y)</option> + <option value="PhosphoCytidine (S)">PhosphoCytidine (S)</option> + <option value="PhosphoCytidine (T)">PhosphoCytidine (T)</option> + <option value="PhosphoCytidine (Y)">PhosphoCytidine (Y)</option> <option value="Phosphogluconoylation (K)">Phosphogluconoylation (K)</option> <option value="Phosphogluconoylation (N-term)">Phosphogluconoylation (N-term)</option> <option value="Phosphoguanosine (H)">Phosphoguanosine (H)</option> @@ -2325,6 +2510,7 @@ <option value="Pro->Gln (P)">Pro->Gln (P)</option> <option value="Pro->Glu (P)">Pro->Glu (P)</option> <option value="Pro->Gly (P)">Pro->Gly (P)</option> + <option value="Pro->HAVA (P)">Pro->HAVA (P)</option> <option value="Pro->His (P)">Pro->His (P)</option> <option value="Pro->Lys (P)">Pro->Lys (P)</option> <option value="Pro->Met (P)">Pro->Met (P)</option> @@ -2428,9 +2614,12 @@ <option value="Ser->Tyr (S)">Ser->Tyr (S)</option> <option value="Ser->Val (S)">Ser->Val (S)</option> <option value="Ser->Xle (S)">Ser->Xle (S)</option> + <option value="serotonylation (Q)">serotonylation (Q)</option> + <option value="shTMT (K)">shTMT (K)</option> + <option value="shTMT (N-term)">shTMT (N-term)</option> + <option value="shTMT (Protein N-term)">shTMT (Protein N-term)</option> <option value="SMA (K)">SMA (K)</option> <option value="SMA (N-term)">SMA (N-term)</option> - <option value="SMCC-maleimide (C)">SMCC-maleimide (C)</option> <option value="spermidine (Q)">spermidine (Q)</option> <option value="spermine (Q)">spermine (Q)</option> <option value="SPITC (K)">SPITC (K)</option> @@ -2467,9 +2656,14 @@ <option value="TAMRA-FP (S)">TAMRA-FP (S)</option> <option value="TAMRA-FP (Y)">TAMRA-FP (Y)</option> <option value="Thiadiazole (C)">Thiadiazole (C)</option> - <option value="Thiazolidine (N-term C)">Thiazolidine (N-term C)</option> - <option value="Thioacyl (K)">Thioacyl (K)</option> - <option value="Thioacyl (X)">Thioacyl (X)</option> + <option value="Thiazolidine (C)">Thiazolidine (C)</option> + <option value="Thiazolidine (F)">Thiazolidine (F)</option> + <option value="Thiazolidine (H)">Thiazolidine (H)</option> + <option value="Thiazolidine (K)">Thiazolidine (K)</option> + <option value="Thiazolidine (Protein N-term)">Thiazolidine (Protein N-term)</option> + <option value="Thiazolidine (R)">Thiazolidine (R)</option> + <option value="Thiazolidine (W)">Thiazolidine (W)</option> + <option value="Thiazolidine (Y)">Thiazolidine (Y)</option> <option value="thioacylPA (K)">thioacylPA (K)</option> <option value="Thiophos-S-S-biotin (S)">Thiophos-S-S-biotin (S)</option> <option value="Thiophos-S-S-biotin (T)">Thiophos-S-S-biotin (T)</option> @@ -2501,7 +2695,12 @@ <option value="TMAB (N-term)">TMAB (N-term)</option> <option value="TMAB:2H(9) (K)">TMAB:2H(9) (K)</option> <option value="TMAB:2H(9) (N-term)">TMAB:2H(9) (N-term)</option> + <option value="TMPP-Ac (K)">TMPP-Ac (K)</option> <option value="TMPP-Ac (N-term)">TMPP-Ac (N-term)</option> + <option value="TMPP-Ac (Y)">TMPP-Ac (Y)</option> + <option value="TMPP-Ac:13C(9) (K)">TMPP-Ac:13C(9) (K)</option> + <option value="TMPP-Ac:13C(9) (N-term)">TMPP-Ac:13C(9) (N-term)</option> + <option value="TMPP-Ac:13C(9) (Y)">TMPP-Ac:13C(9) (Y)</option> <option value="TMT (H)">TMT (H)</option> <option value="TMT (K)">TMT (K)</option> <option value="TMT (N-term)">TMT (N-term)</option> @@ -2520,6 +2719,18 @@ <option value="TMT6plex (Protein N-term)">TMT6plex (Protein N-term)</option> <option value="TMT6plex (S)">TMT6plex (S)</option> <option value="TMT6plex (T)">TMT6plex (T)</option> + <option value="TMTpro (H)">TMTpro (H)</option> + <option value="TMTpro (K)">TMTpro (K)</option> + <option value="TMTpro (N-term)">TMTpro (N-term)</option> + <option value="TMTpro (Protein N-term)">TMTpro (Protein N-term)</option> + <option value="TMTpro (S)">TMTpro (S)</option> + <option value="TMTpro (T)">TMTpro (T)</option> + <option value="TMTpro_zero (H)">TMTpro_zero (H)</option> + <option value="TMTpro_zero (K)">TMTpro_zero (K)</option> + <option value="TMTpro_zero (N-term)">TMTpro_zero (N-term)</option> + <option value="TMTpro_zero (Protein N-term)">TMTpro_zero (Protein N-term)</option> + <option value="TMTpro_zero (S)">TMTpro_zero (S)</option> + <option value="TMTpro_zero (T)">TMTpro_zero (T)</option> <option value="TNBS (K)">TNBS (K)</option> <option value="TNBS (N-term)">TNBS (N-term)</option> <option value="trifluoro (L)">trifluoro (L)</option> @@ -2533,6 +2744,7 @@ <option value="Trimethyl:2H(9) (K)">Trimethyl:2H(9) (K)</option> <option value="Trimethyl:2H(9) (R)">Trimethyl:2H(9) (R)</option> <option value="Trioxidation (C)">Trioxidation (C)</option> + <option value="Trioxidation (F)">Trioxidation (F)</option> <option value="Trioxidation (W)">Trioxidation (W)</option> <option value="Trioxidation (Y)">Trioxidation (Y)</option> <option value="Tripalmitate (Protein N-term C)">Tripalmitate (Protein N-term C)</option> @@ -2591,6 +2803,44 @@ <option value="UgiJoullieProGly (E)">UgiJoullieProGly (E)</option> <option value="UgiJoullieProGlyProGly (D)">UgiJoullieProGlyProGly (D)</option> <option value="UgiJoullieProGlyProGly (E)">UgiJoullieProGlyProGly (E)</option> + <option value="Unknown:162 (C-term)">Unknown:162 (C-term)</option> + <option value="Unknown:162 (D)">Unknown:162 (D)</option> + <option value="Unknown:162 (E)">Unknown:162 (E)</option> + <option value="Unknown:162 (N-term)">Unknown:162 (N-term)</option> + <option value="Unknown:177 (C-term)">Unknown:177 (C-term)</option> + <option value="Unknown:177 (D)">Unknown:177 (D)</option> + <option value="Unknown:177 (E)">Unknown:177 (E)</option> + <option value="Unknown:177 (N-term)">Unknown:177 (N-term)</option> + <option value="Unknown:210 (C-term)">Unknown:210 (C-term)</option> + <option value="Unknown:210 (D)">Unknown:210 (D)</option> + <option value="Unknown:210 (E)">Unknown:210 (E)</option> + <option value="Unknown:210 (N-term)">Unknown:210 (N-term)</option> + <option value="Unknown:216 (C-term)">Unknown:216 (C-term)</option> + <option value="Unknown:216 (D)">Unknown:216 (D)</option> + <option value="Unknown:216 (E)">Unknown:216 (E)</option> + <option value="Unknown:216 (N-term)">Unknown:216 (N-term)</option> + <option value="Unknown:234 (C-term)">Unknown:234 (C-term)</option> + <option value="Unknown:234 (D)">Unknown:234 (D)</option> + <option value="Unknown:234 (E)">Unknown:234 (E)</option> + <option value="Unknown:234 (N-term)">Unknown:234 (N-term)</option> + <option value="Unknown:248 (C-term)">Unknown:248 (C-term)</option> + <option value="Unknown:248 (D)">Unknown:248 (D)</option> + <option value="Unknown:248 (E)">Unknown:248 (E)</option> + <option value="Unknown:248 (N-term)">Unknown:248 (N-term)</option> + <option value="Unknown:250 (C-term)">Unknown:250 (C-term)</option> + <option value="Unknown:250 (D)">Unknown:250 (D)</option> + <option value="Unknown:250 (E)">Unknown:250 (E)</option> + <option value="Unknown:250 (N-term)">Unknown:250 (N-term)</option> + <option value="Unknown:302 (C-term)">Unknown:302 (C-term)</option> + <option value="Unknown:302 (D)">Unknown:302 (D)</option> + <option value="Unknown:302 (E)">Unknown:302 (E)</option> + <option value="Unknown:302 (N-term)">Unknown:302 (N-term)</option> + <option value="Unknown:306 (C-term)">Unknown:306 (C-term)</option> + <option value="Unknown:306 (D)">Unknown:306 (D)</option> + <option value="Unknown:306 (E)">Unknown:306 (E)</option> + <option value="Unknown:306 (N-term)">Unknown:306 (N-term)</option> + <option value="Unknown:420 (C-term)">Unknown:420 (C-term)</option> + <option value="Unknown:420 (N-term)">Unknown:420 (N-term)</option> <option value="Val->Ala (V)">Val->Ala (V)</option> <option value="Val->Arg (V)">Val->Arg (V)</option> <option value="Val->Asn (V)">Val->Asn (V)</option> @@ -2649,28 +2899,93 @@ <option value="Xle->Val (I)">Xle->Val (I)</option> <option value="Xle->Val (L)">Xle->Val (L)</option> <option value="Xlink:B10621 (C)">Xlink:B10621 (C)</option> - <option value="Xlink:DMP (K)">Xlink:DMP (K)</option> - <option value="Xlink:DMP (Protein N-term)">Xlink:DMP (Protein N-term)</option> - <option value="Xlink:DMP-de (K)">Xlink:DMP-de (K)</option> - <option value="Xlink:DMP-de (Protein N-term)">Xlink:DMP-de (Protein N-term)</option> - <option value="Xlink:DMP-s (K)">Xlink:DMP-s (K)</option> - <option value="Xlink:DMP-s (Protein N-term)">Xlink:DMP-s (Protein N-term)</option> - <option value="Xlink:DSS (K)">Xlink:DSS (K)</option> - <option value="Xlink:DSS (Protein N-term)">Xlink:DSS (Protein N-term)</option> - <option value="Xlink:DSS-NH2 (K)">Xlink:DSS-NH2 (K)</option> - <option value="Xlink:DSS-NH2 (Protein N-term)">Xlink:DSS-NH2 (Protein N-term)</option> - <option value="Xlink:DST (K)">Xlink:DST (K)</option> - <option value="Xlink:DST (Protein N-term)">Xlink:DST (Protein N-term)</option> - <option value="Xlink:DTSSP (K)">Xlink:DTSSP (K)</option> - <option value="Xlink:DTSSP (Protein N-term)">Xlink:DTSSP (Protein N-term)</option> - <option value="Xlink:EGS (K)">Xlink:EGS (K)</option> - <option value="Xlink:EGS (Protein N-term)">Xlink:EGS (Protein N-term)</option> - <option value="Xlink:EGScleaved (K)">Xlink:EGScleaved (K)</option> - <option value="Xlink:EGScleaved (Protein N-term)">Xlink:EGScleaved (Protein N-term)</option> - <option value="Xlink:SMCC (C)">Xlink:SMCC (C)</option> - <option value="Xlink:SSD (K)">Xlink:SSD (K)</option> + <option value="Xlink:BMOE (C)">Xlink:BMOE (C)</option> + <option value="Xlink:BS2G[113] (K)">Xlink:BS2G[113] (K)</option> + <option value="Xlink:BS2G[113] (Protein N-term)">Xlink:BS2G[113] (Protein N-term)</option> + <option value="Xlink:BS2G[114] (K)">Xlink:BS2G[114] (K)</option> + <option value="Xlink:BS2G[114] (Protein N-term)">Xlink:BS2G[114] (Protein N-term)</option> + <option value="Xlink:BS2G[217] (K)">Xlink:BS2G[217] (K)</option> + <option value="Xlink:BS2G[217] (Protein N-term)">Xlink:BS2G[217] (Protein N-term)</option> + <option value="Xlink:BS2G[96] (K)">Xlink:BS2G[96] (K)</option> + <option value="Xlink:BS2G[96] (Protein N-term)">Xlink:BS2G[96] (Protein N-term)</option> + <option value="Xlink:BuUrBu[111] (K)">Xlink:BuUrBu[111] (K)</option> + <option value="Xlink:BuUrBu[111] (Protein N-term)">Xlink:BuUrBu[111] (Protein N-term)</option> + <option value="Xlink:BuUrBu[196] (K)">Xlink:BuUrBu[196] (K)</option> + <option value="Xlink:BuUrBu[196] (Protein N-term)">Xlink:BuUrBu[196] (Protein N-term)</option> + <option value="Xlink:BuUrBu[213] (K)">Xlink:BuUrBu[213] (K)</option> + <option value="Xlink:BuUrBu[213] (Protein N-term)">Xlink:BuUrBu[213] (Protein N-term)</option> + <option value="Xlink:BuUrBu[214] (K)">Xlink:BuUrBu[214] (K)</option> + <option value="Xlink:BuUrBu[214] (Protein N-term)">Xlink:BuUrBu[214] (Protein N-term)</option> + <option value="Xlink:BuUrBu[317] (K)">Xlink:BuUrBu[317] (K)</option> + <option value="Xlink:BuUrBu[317] (Protein N-term)">Xlink:BuUrBu[317] (Protein N-term)</option> + <option value="Xlink:BuUrBu[85] (K)">Xlink:BuUrBu[85] (K)</option> + <option value="Xlink:BuUrBu[85] (Protein N-term)">Xlink:BuUrBu[85] (Protein N-term)</option> + <option value="Xlink:DFDNB (K)">Xlink:DFDNB (K)</option> + <option value="Xlink:DFDNB (N)">Xlink:DFDNB (N)</option> + <option value="Xlink:DFDNB (Q)">Xlink:DFDNB (Q)</option> + <option value="Xlink:DFDNB (R)">Xlink:DFDNB (R)</option> + <option value="Xlink:DMP[122] (K)">Xlink:DMP[122] (K)</option> + <option value="Xlink:DMP[122] (Protein N-term)">Xlink:DMP[122] (Protein N-term)</option> + <option value="Xlink:DMP[139] (K)">Xlink:DMP[139] (K)</option> + <option value="Xlink:DMP[139] (Protein N-term)">Xlink:DMP[139] (Protein N-term)</option> + <option value="Xlink:DMP[140] (K)">Xlink:DMP[140] (K)</option> + <option value="Xlink:DMP[140] (Protein N-term)">Xlink:DMP[140] (Protein N-term)</option> + <option value="Xlink:DMP[154] (K)">Xlink:DMP[154] (K)</option> + <option value="Xlink:DMP[154] (Protein N-term)">Xlink:DMP[154] (Protein N-term)</option> + <option value="Xlink:DSS[138] (K)">Xlink:DSS[138] (K)</option> + <option value="Xlink:DSS[138] (Protein N-term)">Xlink:DSS[138] (Protein N-term)</option> + <option value="Xlink:DSS[155] (K)">Xlink:DSS[155] (K)</option> + <option value="Xlink:DSS[155] (Protein N-term)">Xlink:DSS[155] (Protein N-term)</option> + <option value="Xlink:DSS[156] (K)">Xlink:DSS[156] (K)</option> + <option value="Xlink:DSS[156] (Protein N-term)">Xlink:DSS[156] (Protein N-term)</option> + <option value="Xlink:DSS[259] (K)">Xlink:DSS[259] (K)</option> + <option value="Xlink:DSS[259] (Protein N-term)">Xlink:DSS[259] (Protein N-term)</option> + <option value="Xlink:DSSO[104] (K)">Xlink:DSSO[104] (K)</option> + <option value="Xlink:DSSO[104] (Protein N-term)">Xlink:DSSO[104] (Protein N-term)</option> + <option value="Xlink:DSSO[158] (K)">Xlink:DSSO[158] (K)</option> + <option value="Xlink:DSSO[158] (Protein N-term)">Xlink:DSSO[158] (Protein N-term)</option> + <option value="Xlink:DSSO[175] (K)">Xlink:DSSO[175] (K)</option> + <option value="Xlink:DSSO[175] (Protein N-term)">Xlink:DSSO[175] (Protein N-term)</option> + <option value="Xlink:DSSO[176] (K)">Xlink:DSSO[176] (K)</option> + <option value="Xlink:DSSO[176] (Protein N-term)">Xlink:DSSO[176] (Protein N-term)</option> + <option value="Xlink:DSSO[279] (K)">Xlink:DSSO[279] (K)</option> + <option value="Xlink:DSSO[279] (Protein N-term)">Xlink:DSSO[279] (Protein N-term)</option> + <option value="Xlink:DSSO[54] (K)">Xlink:DSSO[54] (K)</option> + <option value="Xlink:DSSO[54] (Protein N-term)">Xlink:DSSO[54] (Protein N-term)</option> + <option value="Xlink:DSSO[86] (K)">Xlink:DSSO[86] (K)</option> + <option value="Xlink:DSSO[86] (Protein N-term)">Xlink:DSSO[86] (Protein N-term)</option> + <option value="Xlink:DST[114] (K)">Xlink:DST[114] (K)</option> + <option value="Xlink:DST[114] (Protein N-term)">Xlink:DST[114] (Protein N-term)</option> + <option value="Xlink:DST[132] (K)">Xlink:DST[132] (K)</option> + <option value="Xlink:DST[132] (Protein N-term)">Xlink:DST[132] (Protein N-term)</option> + <option value="Xlink:DST[56] (K)">Xlink:DST[56] (K)</option> + <option value="Xlink:DST[56] (Protein N-term)">Xlink:DST[56] (Protein N-term)</option> + <option value="Xlink:DTBP[172] (K)">Xlink:DTBP[172] (K)</option> + <option value="Xlink:DTBP[172] (Protein N-term)">Xlink:DTBP[172] (Protein N-term)</option> + <option value="Xlink:DTBP[87] (K)">Xlink:DTBP[87] (K)</option> + <option value="Xlink:DTBP[87] (Protein N-term)">Xlink:DTBP[87] (Protein N-term)</option> + <option value="Xlink:DTSSP[174] (K)">Xlink:DTSSP[174] (K)</option> + <option value="Xlink:DTSSP[174] (Protein N-term)">Xlink:DTSSP[174] (Protein N-term)</option> + <option value="Xlink:DTSSP[192] (K)">Xlink:DTSSP[192] (K)</option> + <option value="Xlink:DTSSP[192] (Protein N-term)">Xlink:DTSSP[192] (Protein N-term)</option> + <option value="Xlink:DTSSP[88] (K)">Xlink:DTSSP[88] (K)</option> + <option value="Xlink:DTSSP[88] (Protein N-term)">Xlink:DTSSP[88] (Protein N-term)</option> + <option value="Xlink:EGS[115] (K)">Xlink:EGS[115] (K)</option> + <option value="Xlink:EGS[115] (Protein N-term)">Xlink:EGS[115] (Protein N-term)</option> + <option value="Xlink:EGS[226] (K)">Xlink:EGS[226] (K)</option> + <option value="Xlink:EGS[226] (Protein N-term)">Xlink:EGS[226] (Protein N-term)</option> + <option value="Xlink:EGS[244] (K)">Xlink:EGS[244] (K)</option> + <option value="Xlink:EGS[244] (Protein N-term)">Xlink:EGS[244] (Protein N-term)</option> + <option value="Xlink:SMCC[219] (C)">Xlink:SMCC[219] (C)</option> + <option value="Xlink:SMCC[219] (K)">Xlink:SMCC[219] (K)</option> + <option value="Xlink:SMCC[219] (Protein N-term)">Xlink:SMCC[219] (Protein N-term)</option> + <option value="Xlink:SMCC[237] (C)">Xlink:SMCC[237] (C)</option> + <option value="Xlink:SMCC[237] (K)">Xlink:SMCC[237] (K)</option> + <option value="Xlink:SMCC[237] (Protein N-term)">Xlink:SMCC[237] (Protein N-term)</option> + <option value="Xlink:SMCC[321] (C)">Xlink:SMCC[321] (C)</option> <option value="ZGB (K)">ZGB (K)</option> <option value="ZGB (N-term)">ZGB (N-term)</option> + <option value="ZQG (K)">ZQG (K)</option> <expand macro="list_string_san"/> </param> <param name="variable_modifications" argument="-variable_modifications" multiple="true" type="select" optional="true" label="Variable modifications, specified using Unimod (www.unimod.org) terms" help="e.g. 'Carbamidomethyl (C)' or 'Oxidation (M)'"> @@ -2700,6 +3015,7 @@ <option value="Acetyl (K)">Acetyl (K)</option> <option value="Acetyl (N-term)">Acetyl (N-term)</option> <option value="Acetyl (Protein N-term)">Acetyl (Protein N-term)</option> + <option value="Acetyl (R)">Acetyl (R)</option> <option value="Acetyl (S)">Acetyl (S)</option> <option value="Acetyl (T)">Acetyl (T)</option> <option value="Acetyl (Y)">Acetyl (Y)</option> @@ -2731,6 +3047,7 @@ <option value="AEC-MAEC (T)">AEC-MAEC (T)</option> <option value="AEC-MAEC:2H(4) (S)">AEC-MAEC:2H(4) (S)</option> <option value="AEC-MAEC:2H(4) (T)">AEC-MAEC:2H(4) (T)</option> + <option value="AFB1_Dialdehyde (K)">AFB1_Dialdehyde (K)</option> <option value="AHA-Alkyne (M)">AHA-Alkyne (M)</option> <option value="AHA-Alkyne-KDDDD (M)">AHA-Alkyne-KDDDD (M)</option> <option value="AHA-SS (M)">AHA-SS (M)</option> @@ -2833,7 +3150,9 @@ <option value="Asp->Tyr (D)">Asp->Tyr (D)</option> <option value="Asp->Val (D)">Asp->Val (D)</option> <option value="Asp->Xle (D)">Asp->Xle (D)</option> + <option value="Aspartylurea (H)">Aspartylurea (H)</option> <option value="Atto495Maleimide (C)">Atto495Maleimide (C)</option> + <option value="AzidoF (F)">AzidoF (F)</option> <option value="azole (C)">azole (C)</option> <option value="azole (S)">azole (S)</option> <option value="Bacillosamine (N)">Bacillosamine (N)</option> @@ -2843,11 +3162,17 @@ <option value="BDMAPP (Protein N-term)">BDMAPP (Protein N-term)</option> <option value="BDMAPP (W)">BDMAPP (W)</option> <option value="BDMAPP (Y)">BDMAPP (Y)</option> + <option value="BEMAD_C (C)">BEMAD_C (C)</option> + <option value="BEMAD_C:2H(6) (C)">BEMAD_C:2H(6) (C)</option> + <option value="BEMAD_ST (S)">BEMAD_ST (S)</option> + <option value="BEMAD_ST (T)">BEMAD_ST (T)</option> + <option value="BEMAD_ST:2H(6) (S)">BEMAD_ST:2H(6) (S)</option> + <option value="BEMAD_ST:2H(6) (T)">BEMAD_ST:2H(6) (T)</option> <option value="Benzoyl (K)">Benzoyl (K)</option> <option value="Benzoyl (N-term)">Benzoyl (N-term)</option> <option value="benzylguanidine (K)">benzylguanidine (K)</option> - <option value="beta FNA (C)">beta FNA (C)</option> - <option value="beta FNA (K)">beta FNA (K)</option> + <option value="betaFNA (C)">betaFNA (C)</option> + <option value="betaFNA (K)">betaFNA (K)</option> <option value="BHT (C)">BHT (C)</option> <option value="BHT (H)">BHT (H)</option> <option value="BHT (K)">BHT (K)</option> @@ -2870,6 +3195,8 @@ <option value="Biotin:Invitrogen-M1602 (C)">Biotin:Invitrogen-M1602 (C)</option> <option value="Biotin:Sigma-B1267 (C)">Biotin:Sigma-B1267 (C)</option> <option value="Biotin:Thermo-21325 (K)">Biotin:Thermo-21325 (K)</option> + <option value="Biotin:Thermo-21328 (K)">Biotin:Thermo-21328 (K)</option> + <option value="Biotin:Thermo-21328 (N-term)">Biotin:Thermo-21328 (N-term)</option> <option value="Biotin:Thermo-21330 (K)">Biotin:Thermo-21330 (K)</option> <option value="Biotin:Thermo-21330 (N-term)">Biotin:Thermo-21330 (N-term)</option> <option value="Biotin:Thermo-21345 (Q)">Biotin:Thermo-21345 (Q)</option> @@ -2893,7 +3220,6 @@ <option value="BITC (C)">BITC (C)</option> <option value="BITC (K)">BITC (K)</option> <option value="BITC (N-term)">BITC (N-term)</option> - <option value="BMOE (C)">BMOE (C)</option> <option value="BMP-piperidinol (C)">BMP-piperidinol (C)</option> <option value="BMP-piperidinol (M)">BMP-piperidinol (M)</option> <option value="Bodipy (C)">Bodipy (C)</option> @@ -2918,6 +3244,7 @@ <option value="Carbamidomethyl (E)">Carbamidomethyl (E)</option> <option value="Carbamidomethyl (H)">Carbamidomethyl (H)</option> <option value="Carbamidomethyl (K)">Carbamidomethyl (K)</option> + <option value="Carbamidomethyl (M)">Carbamidomethyl (M)</option> <option value="Carbamidomethyl (N-term)">Carbamidomethyl (N-term)</option> <option value="Carbamidomethyl (S)">Carbamidomethyl (S)</option> <option value="Carbamidomethyl (T)">Carbamidomethyl (T)</option> @@ -2934,6 +3261,14 @@ <option value="Carbamyl (T)">Carbamyl (T)</option> <option value="Carbamyl (Y)">Carbamyl (Y)</option> <option value="Carbofuran (S)">Carbofuran (S)</option> + <option value="Carbonyl (A)">Carbonyl (A)</option> + <option value="Carbonyl (E)">Carbonyl (E)</option> + <option value="Carbonyl (I)">Carbonyl (I)</option> + <option value="Carbonyl (L)">Carbonyl (L)</option> + <option value="Carbonyl (Q)">Carbonyl (Q)</option> + <option value="Carbonyl (R)">Carbonyl (R)</option> + <option value="Carbonyl (S)">Carbonyl (S)</option> + <option value="Carbonyl (V)">Carbonyl (V)</option> <option value="Carboxy (D)">Carboxy (D)</option> <option value="Carboxy (E)">Carboxy (E)</option> <option value="Carboxy (K)">Carboxy (K)</option> @@ -2954,6 +3289,9 @@ <option value="Cation:Ag (C-term)">Cation:Ag (C-term)</option> <option value="Cation:Ag (D)">Cation:Ag (D)</option> <option value="Cation:Ag (E)">Cation:Ag (E)</option> + <option value="Cation:Al[III] (C-term)">Cation:Al[III] (C-term)</option> + <option value="Cation:Al[III] (D)">Cation:Al[III] (D)</option> + <option value="Cation:Al[III] (E)">Cation:Al[III] (E)</option> <option value="Cation:Ca[II] (C-term)">Cation:Ca[II] (C-term)</option> <option value="Cation:Ca[II] (D)">Cation:Ca[II] (D)</option> <option value="Cation:Ca[II] (E)">Cation:Ca[II] (E)</option> @@ -2964,6 +3302,9 @@ <option value="Cation:Fe[II] (C-term)">Cation:Fe[II] (C-term)</option> <option value="Cation:Fe[II] (D)">Cation:Fe[II] (D)</option> <option value="Cation:Fe[II] (E)">Cation:Fe[II] (E)</option> + <option value="Cation:Fe[III] (C-term)">Cation:Fe[III] (C-term)</option> + <option value="Cation:Fe[III] (D)">Cation:Fe[III] (D)</option> + <option value="Cation:Fe[III] (E)">Cation:Fe[III] (E)</option> <option value="Cation:K (C-term)">Cation:K (C-term)</option> <option value="Cation:K (D)">Cation:K (D)</option> <option value="Cation:K (E)">Cation:K (E)</option> @@ -2988,11 +3329,10 @@ <option value="cGMP+RMP-loss (C)">cGMP+RMP-loss (C)</option> <option value="cGMP+RMP-loss (S)">cGMP+RMP-loss (S)</option> <option value="CHDH (D)">CHDH (D)</option> + <option value="Chlorination (W)">Chlorination (W)</option> <option value="Chlorination (Y)">Chlorination (Y)</option> - <option value="Chlorpyrifos (S)">Chlorpyrifos (S)</option> - <option value="Chlorpyrifos (T)">Chlorpyrifos (T)</option> - <option value="Chlorpyrifos (Y)">Chlorpyrifos (Y)</option> <option value="Cholesterol (Protein C-term)">Cholesterol (Protein C-term)</option> + <option value="CIGG (K)">CIGG (K)</option> <option value="CLIP_TRAQ_2 (K)">CLIP_TRAQ_2 (K)</option> <option value="CLIP_TRAQ_2 (N-term)">CLIP_TRAQ_2 (N-term)</option> <option value="CLIP_TRAQ_2 (Y)">CLIP_TRAQ_2 (Y)</option> @@ -3303,6 +3643,8 @@ <option value="Deamidated:18O(1) (Q)">Deamidated:18O(1) (Q)</option> <option value="Decanoyl (S)">Decanoyl (S)</option> <option value="Decanoyl (T)">Decanoyl (T)</option> + <option value="Decarboxylation (D)">Decarboxylation (D)</option> + <option value="Decarboxylation (E)">Decarboxylation (E)</option> <option value="DEDGFLYMVYASQETFG (K)">DEDGFLYMVYASQETFG (K)</option> <option value="Dehydrated (D)">Dehydrated (D)</option> <option value="Dehydrated (N-term C)">Dehydrated (N-term C)</option> @@ -3312,7 +3654,10 @@ <option value="Dehydrated (T)">Dehydrated (T)</option> <option value="Dehydrated (Y)">Dehydrated (Y)</option> <option value="Dehydro (C)">Dehydro (C)</option> + <option value="Delta:H(-4)O(2) (W)">Delta:H(-4)O(2) (W)</option> + <option value="Delta:H(-4)O(3) (W)">Delta:H(-4)O(3) (W)</option> <option value="Delta:H(1)N(-1)18O(1) (N)">Delta:H(1)N(-1)18O(1) (N)</option> + <option value="Delta:H(10)C(8)O(1) (K)">Delta:H(10)C(8)O(1) (K)</option> <option value="Delta:H(2)C(2) (H)">Delta:H(2)C(2) (H)</option> <option value="Delta:H(2)C(2) (K)">Delta:H(2)C(2) (K)</option> <option value="Delta:H(2)C(2) (N-term)">Delta:H(2)C(2) (N-term)</option> @@ -3321,6 +3666,7 @@ <option value="Delta:H(2)C(3)O(1) (K)">Delta:H(2)C(3)O(1) (K)</option> <option value="Delta:H(2)C(3)O(1) (R)">Delta:H(2)C(3)O(1) (R)</option> <option value="Delta:H(2)C(5) (K)">Delta:H(2)C(5) (K)</option> + <option value="Delta:H(3)C(3)O(2) (K)">Delta:H(3)C(3)O(2) (K)</option> <option value="Delta:H(4)C(2) (H)">Delta:H(4)C(2) (H)</option> <option value="Delta:H(4)C(2) (K)">Delta:H(4)C(2) (K)</option> <option value="Delta:H(4)C(2) (N-term)">Delta:H(4)C(2) (N-term)</option> @@ -3331,6 +3677,8 @@ <option value="Delta:H(4)C(3)O(1) (C)">Delta:H(4)C(3)O(1) (C)</option> <option value="Delta:H(4)C(3)O(1) (H)">Delta:H(4)C(3)O(1) (H)</option> <option value="Delta:H(4)C(3)O(1) (K)">Delta:H(4)C(3)O(1) (K)</option> + <option value="Delta:H(4)C(3)O(1) (R)">Delta:H(4)C(3)O(1) (R)</option> + <option value="Delta:H(4)C(5)O(1) (R)">Delta:H(4)C(5)O(1) (R)</option> <option value="Delta:H(4)C(6) (K)">Delta:H(4)C(6) (K)</option> <option value="Delta:H(5)C(2) (P)">Delta:H(5)C(2) (P)</option> <option value="Delta:H(6)C(3)O(1) (C)">Delta:H(6)C(3)O(1) (C)</option> @@ -3338,10 +3686,12 @@ <option value="Delta:H(6)C(3)O(1) (K)">Delta:H(6)C(3)O(1) (K)</option> <option value="Delta:H(6)C(3)O(1) (Protein N-term)">Delta:H(6)C(3)O(1) (Protein N-term)</option> <option value="Delta:H(6)C(6)O(1) (K)">Delta:H(6)C(6)O(1) (K)</option> + <option value="Delta:H(6)C(7)O(4) (R)">Delta:H(6)C(7)O(4) (R)</option> <option value="Delta:H(8)C(6)O(1) (K)">Delta:H(8)C(6)O(1) (K)</option> <option value="Delta:H(8)C(6)O(1) (Protein N-term)">Delta:H(8)C(6)O(1) (Protein N-term)</option> <option value="Delta:H(8)C(6)O(2) (K)">Delta:H(8)C(6)O(2) (K)</option> <option value="Delta:Hg(1) (C)">Delta:Hg(1) (C)</option> + <option value="Delta:O(4) (W)">Delta:O(4) (W)</option> <option value="Delta:S(-1)Se(1) (C)">Delta:S(-1)Se(1) (C)</option> <option value="Delta:S(-1)Se(1) (M)">Delta:S(-1)Se(1) (M)</option> <option value="Delta:Se(1) (C)">Delta:Se(1) (C)</option> @@ -3352,10 +3702,6 @@ <option value="Deoxyhypusine (Q)">Deoxyhypusine (Q)</option> <option value="DeStreak (C)">DeStreak (C)</option> <option value="Dethiomethyl (M)">Dethiomethyl (M)</option> - <option value="DFDNB (K)">DFDNB (K)</option> - <option value="DFDNB (N)">DFDNB (N)</option> - <option value="DFDNB (Q)">DFDNB (Q)</option> - <option value="DFDNB (R)">DFDNB (R)</option> <option value="dHex (N)">dHex (N)</option> <option value="dHex (S)">dHex (S)</option> <option value="dHex (T)">dHex (T)</option> @@ -3377,8 +3723,6 @@ <option value="dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T)">dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T)</option> <option value="dHex(1)Hex(1)HexNAc(2)NeuAc(2) (S)">dHex(1)Hex(1)HexNAc(2)NeuAc(2) (S)</option> <option value="dHex(1)Hex(1)HexNAc(2)NeuAc(2) (T)">dHex(1)Hex(1)HexNAc(2)NeuAc(2) (T)</option> - <option value="dHex(1)Hex(1)HexNAc(2)NeuGc(1) (S)">dHex(1)Hex(1)HexNAc(2)NeuGc(1) (S)</option> - <option value="dHex(1)Hex(1)HexNAc(2)NeuGc(1) (T)">dHex(1)Hex(1)HexNAc(2)NeuGc(1) (T)</option> <option value="dHex(1)Hex(1)HexNAc(2)Sulf(1) (S)">dHex(1)Hex(1)HexNAc(2)Sulf(1) (S)</option> <option value="dHex(1)Hex(1)HexNAc(2)Sulf(1) (T)">dHex(1)Hex(1)HexNAc(2)Sulf(1) (T)</option> <option value="dHex(1)Hex(1)HexNAc(3) (S)">dHex(1)Hex(1)HexNAc(3) (S)</option> @@ -3405,6 +3749,8 @@ <option value="dHex(1)Hex(2)HexA(1)HexNAc(2) (T)">dHex(1)Hex(2)HexA(1)HexNAc(2) (T)</option> <option value="dHex(1)Hex(2)HexNAc(1) (S)">dHex(1)Hex(2)HexNAc(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(1) (T)">dHex(1)Hex(2)HexNAc(1) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(1)NeuAc(2) (S)">dHex(1)Hex(2)HexNAc(1)NeuAc(2) (S)</option> + <option value="dHex(1)Hex(2)HexNAc(1)NeuAc(2) (T)">dHex(1)Hex(2)HexNAc(1)NeuAc(2) (T)</option> <option value="dHex(1)Hex(2)HexNAc(1)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(1)Sulf(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(1)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(1)Sulf(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)</option> @@ -3413,6 +3759,7 @@ <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(2) (T)">dHex(1)Hex(2)HexNAc(2)NeuAc(2) (T)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(1) (N)">dHex(1)Hex(2)HexNAc(2)NeuGc(1) (N)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(1) (S)">dHex(1)Hex(2)HexNAc(2)NeuGc(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(1) (T)">dHex(1)Hex(2)HexNAc(2)NeuGc(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(2)NeuGc(2) (S)">dHex(1)Hex(2)HexNAc(2)NeuGc(2) (S)</option> @@ -3431,12 +3778,15 @@ <option value="dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(3)Sulf(1) (S)">dHex(1)Hex(2)HexNAc(3)Sulf(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(3)Sulf(1) (T)">dHex(1)Hex(2)HexNAc(3)Sulf(1) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(4) (N)">dHex(1)Hex(2)HexNAc(4) (N)</option> <option value="dHex(1)Hex(2)HexNAc(4) (S)">dHex(1)Hex(2)HexNAc(4) (S)</option> <option value="dHex(1)Hex(2)HexNAc(4) (T)">dHex(1)Hex(2)HexNAc(4) (T)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(1) (S)">dHex(1)Hex(2)HexNAc(4)NeuAc(1) (S)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(1) (T)">dHex(1)Hex(2)HexNAc(4)NeuAc(1) (T)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(2) (S)">dHex(1)Hex(2)HexNAc(4)NeuAc(2) (S)</option> <option value="dHex(1)Hex(2)HexNAc(4)NeuAc(2) (T)">dHex(1)Hex(2)HexNAc(4)NeuAc(2) (T)</option> + <option value="dHex(1)Hex(2)HexNAc(4)Sulf(2) (S)">dHex(1)Hex(2)HexNAc(4)Sulf(2) (S)</option> + <option value="dHex(1)Hex(2)HexNAc(4)Sulf(2) (T)">dHex(1)Hex(2)HexNAc(4)Sulf(2) (T)</option> <option value="dHex(1)Hex(3) (S)">dHex(1)Hex(3) (S)</option> <option value="dHex(1)Hex(3) (T)">dHex(1)Hex(3) (T)</option> <option value="dHex(1)Hex(3)HexA(1)HexNAc(1) (S)">dHex(1)Hex(3)HexA(1)HexNAc(1) (S)</option> @@ -3495,6 +3845,8 @@ <option value="dHex(1)Hex(3)HexNAc(6)Sulf(1) (N)">dHex(1)Hex(3)HexNAc(6)Sulf(1) (N)</option> <option value="dHex(1)Hex(4) (S)">dHex(1)Hex(4) (S)</option> <option value="dHex(1)Hex(4) (T)">dHex(1)Hex(4) (T)</option> + <option value="dHex(1)Hex(4)HexA(1) (S)">dHex(1)Hex(4)HexA(1) (S)</option> + <option value="dHex(1)Hex(4)HexA(1) (T)">dHex(1)Hex(4)HexA(1) (T)</option> <option value="dHex(1)Hex(4)HexA(1)HexNAc(2) (S)">dHex(1)Hex(4)HexA(1)HexNAc(2) (S)</option> <option value="dHex(1)Hex(4)HexA(1)HexNAc(2) (T)">dHex(1)Hex(4)HexA(1)HexNAc(2) (T)</option> <option value="dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S)">dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S)</option> @@ -3506,6 +3858,8 @@ <option value="dHex(1)Hex(4)HexNAc(2)Pent(1) (N)">dHex(1)Hex(4)HexNAc(2)Pent(1) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3) (N)">dHex(1)Hex(4)HexNAc(3) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1) (N)">dHex(1)Hex(4)HexNAc(3)NeuAc(1) (N)</option> + <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1) (S)">dHex(1)Hex(4)HexNAc(3)NeuAc(1) (S)</option> + <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1) (T)">dHex(1)Hex(4)HexNAc(3)NeuAc(1) (T)</option> <option value="dHex(1)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N)">dHex(1)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3)NeuGc(1) (N)">dHex(1)Hex(4)HexNAc(3)NeuGc(1) (N)</option> <option value="dHex(1)Hex(4)HexNAc(3)Pent(1) (N)">dHex(1)Hex(4)HexNAc(3)Pent(1) (N)</option> @@ -3552,6 +3906,7 @@ <option value="dHex(1)Hex(7)HexNAc(3)Phos(1) (N)">dHex(1)Hex(7)HexNAc(3)Phos(1) (N)</option> <option value="dHex(1)Hex(7)HexNAc(3)Sulf(1) (N)">dHex(1)Hex(7)HexNAc(3)Sulf(1) (N)</option> <option value="dHex(1)Hex(7)HexNAc(4) (N)">dHex(1)Hex(7)HexNAc(4) (N)</option> + <option value="dHex(1)Hex(8)HexNAc(2) (N)">dHex(1)Hex(8)HexNAc(2) (N)</option> <option value="dHex(1)HexNAc(3) (S)">dHex(1)HexNAc(3) (S)</option> <option value="dHex(1)HexNAc(3) (T)">dHex(1)HexNAc(3) (T)</option> <option value="dHex(1)HexNAc(4) (S)">dHex(1)HexNAc(4) (S)</option> @@ -3568,6 +3923,8 @@ <option value="dHex(2)Hex(1)HexNAc(2)NeuGc(1) (T)">dHex(2)Hex(1)HexNAc(2)NeuGc(1) (T)</option> <option value="dHex(2)Hex(1)HexNAc(3) (S)">dHex(2)Hex(1)HexNAc(3) (S)</option> <option value="dHex(2)Hex(1)HexNAc(3) (T)">dHex(2)Hex(1)HexNAc(3) (T)</option> + <option value="dHex(2)Hex(1)HexNAc(4)Sulf(1) (S)">dHex(2)Hex(1)HexNAc(4)Sulf(1) (S)</option> + <option value="dHex(2)Hex(1)HexNAc(4)Sulf(1) (T)">dHex(2)Hex(1)HexNAc(4)Sulf(1) (T)</option> <option value="dHex(2)Hex(2) (S)">dHex(2)Hex(2) (S)</option> <option value="dHex(2)Hex(2) (T)">dHex(2)Hex(2) (T)</option> <option value="dHex(2)Hex(2)HexA(1) (S)">dHex(2)Hex(2)HexA(1) (S)</option> @@ -3604,8 +3961,12 @@ <option value="dHex(2)Hex(2)HexNAc(3)Sulf(1) (T)">dHex(2)Hex(2)HexNAc(3)Sulf(1) (T)</option> <option value="dHex(2)Hex(2)HexNAc(4) (S)">dHex(2)Hex(2)HexNAc(4) (S)</option> <option value="dHex(2)Hex(2)HexNAc(4) (T)">dHex(2)Hex(2)HexNAc(4) (T)</option> + <option value="dHex(2)Hex(2)HexNAc(4)Sulf(2) (S)">dHex(2)Hex(2)HexNAc(4)Sulf(2) (S)</option> + <option value="dHex(2)Hex(2)HexNAc(4)Sulf(2) (T)">dHex(2)Hex(2)HexNAc(4)Sulf(2) (T)</option> <option value="dHex(2)Hex(2)HexNAc(5) (S)">dHex(2)Hex(2)HexNAc(5) (S)</option> <option value="dHex(2)Hex(2)HexNAc(5) (T)">dHex(2)Hex(2)HexNAc(5) (T)</option> + <option value="dHex(2)Hex(2)HexNAc(6)Sulf(1) (S)">dHex(2)Hex(2)HexNAc(6)Sulf(1) (S)</option> + <option value="dHex(2)Hex(2)HexNAc(6)Sulf(1) (T)">dHex(2)Hex(2)HexNAc(6)Sulf(1) (T)</option> <option value="dHex(2)Hex(3) (S)">dHex(2)Hex(3) (S)</option> <option value="dHex(2)Hex(3) (T)">dHex(2)Hex(3) (T)</option> <option value="dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S)">dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S)</option> @@ -3630,15 +3991,17 @@ <option value="dHex(2)Hex(3)HexNAc(3)NeuAc(1) (T)">dHex(2)Hex(3)HexNAc(3)NeuAc(1) (T)</option> <option value="dHex(2)Hex(3)HexNAc(3)NeuAc(2) (S)">dHex(2)Hex(3)HexNAc(3)NeuAc(2) (S)</option> <option value="dHex(2)Hex(3)HexNAc(3)NeuAc(2) (T)">dHex(2)Hex(3)HexNAc(3)NeuAc(2) (T)</option> - <option value="dHex(2)Hex(3)HexNAc(3)NeuGc(1) (S)">dHex(2)Hex(3)HexNAc(3)NeuGc(1) (S)</option> - <option value="dHex(2)Hex(3)HexNAc(3)NeuGc(1) (T)">dHex(2)Hex(3)HexNAc(3)NeuGc(1) (T)</option> <option value="dHex(2)Hex(3)HexNAc(3)Pent(1) (N)">dHex(2)Hex(3)HexNAc(3)Pent(1) (N)</option> <option value="dHex(2)Hex(3)HexNAc(3)Pent(2) (N)">dHex(2)Hex(3)HexNAc(3)Pent(2) (N)</option> + <option value="dHex(2)Hex(3)HexNAc(3)Sulf(1) (S)">dHex(2)Hex(3)HexNAc(3)Sulf(1) (S)</option> + <option value="dHex(2)Hex(3)HexNAc(3)Sulf(1) (T)">dHex(2)Hex(3)HexNAc(3)Sulf(1) (T)</option> <option value="dHex(2)Hex(3)HexNAc(4) (N)">dHex(2)Hex(3)HexNAc(4) (N)</option> <option value="dHex(2)Hex(3)HexNAc(4) (S)">dHex(2)Hex(3)HexNAc(4) (S)</option> <option value="dHex(2)Hex(3)HexNAc(4) (T)">dHex(2)Hex(3)HexNAc(4) (T)</option> + <option value="dHex(2)Hex(3)HexNAc(4)NeuAc(1) (N)">dHex(2)Hex(3)HexNAc(4)NeuAc(1) (N)</option> <option value="dHex(2)Hex(3)HexNAc(4)Pent(1) (N)">dHex(2)Hex(3)HexNAc(4)Pent(1) (N)</option> <option value="dHex(2)Hex(3)HexNAc(4)Pent(2) (N)">dHex(2)Hex(3)HexNAc(4)Pent(2) (N)</option> + <option value="dHex(2)Hex(3)HexNAc(5) (N)">dHex(2)Hex(3)HexNAc(5) (N)</option> <option value="dHex(2)Hex(3)HexNAc(5) (S)">dHex(2)Hex(3)HexNAc(5) (S)</option> <option value="dHex(2)Hex(3)HexNAc(5) (T)">dHex(2)Hex(3)HexNAc(5) (T)</option> <option value="dHex(2)Hex(3)HexNAc(6) (N)">dHex(2)Hex(3)HexNAc(6) (N)</option> @@ -3662,6 +4025,8 @@ <option value="dHex(2)Hex(4)HexNAc(5) (N)">dHex(2)Hex(4)HexNAc(5) (N)</option> <option value="dHex(2)Hex(4)HexNAc(5) (S)">dHex(2)Hex(4)HexNAc(5) (S)</option> <option value="dHex(2)Hex(4)HexNAc(5) (T)">dHex(2)Hex(4)HexNAc(5) (T)</option> + <option value="dHex(2)Hex(5)HexNAc(2)Me(1) (S)">dHex(2)Hex(5)HexNAc(2)Me(1) (S)</option> + <option value="dHex(2)Hex(5)HexNAc(2)Me(1) (T)">dHex(2)Hex(5)HexNAc(2)Me(1) (T)</option> <option value="dHex(2)Hex(5)HexNAc(3)Pent(1) (N)">dHex(2)Hex(5)HexNAc(3)Pent(1) (N)</option> <option value="dHex(2)Hex(5)HexNAc(4) (N)">dHex(2)Hex(5)HexNAc(4) (N)</option> <option value="dHex(2)HexNAc(2)Kdn(1) (S)">dHex(2)HexNAc(2)Kdn(1) (S)</option> @@ -3686,6 +4051,12 @@ <option value="dHex(3)Hex(2)HexNAc(3)Kdn(1) (T)">dHex(3)Hex(2)HexNAc(3)Kdn(1) (T)</option> <option value="dHex(3)Hex(2)HexNAc(4) (S)">dHex(3)Hex(2)HexNAc(4) (S)</option> <option value="dHex(3)Hex(2)HexNAc(4) (T)">dHex(3)Hex(2)HexNAc(4) (T)</option> + <option value="dHex(3)Hex(2)HexNAc(4)Sulf(2) (S)">dHex(3)Hex(2)HexNAc(4)Sulf(2) (S)</option> + <option value="dHex(3)Hex(2)HexNAc(4)Sulf(2) (T)">dHex(3)Hex(2)HexNAc(4)Sulf(2) (T)</option> + <option value="dHex(3)Hex(3)HexNAc(1) (S)">dHex(3)Hex(3)HexNAc(1) (S)</option> + <option value="dHex(3)Hex(3)HexNAc(1) (T)">dHex(3)Hex(3)HexNAc(1) (T)</option> + <option value="dHex(3)Hex(3)HexNAc(2) (S)">dHex(3)Hex(3)HexNAc(2) (S)</option> + <option value="dHex(3)Hex(3)HexNAc(2) (T)">dHex(3)Hex(3)HexNAc(2) (T)</option> <option value="dHex(3)Hex(3)HexNAc(3) (S)">dHex(3)Hex(3)HexNAc(3) (S)</option> <option value="dHex(3)Hex(3)HexNAc(3) (T)">dHex(3)Hex(3)HexNAc(3) (T)</option> <option value="dHex(3)Hex(3)HexNAc(3)NeuAc(1) (S)">dHex(3)Hex(3)HexNAc(3)NeuAc(1) (S)</option> @@ -3709,6 +4080,8 @@ <option value="dHex(4)Hex(2)HexNAc(2)Kdn(1) (T)">dHex(4)Hex(2)HexNAc(2)Kdn(1) (T)</option> <option value="dHex(4)Hex(2)HexNAc(3) (S)">dHex(4)Hex(2)HexNAc(3) (S)</option> <option value="dHex(4)Hex(2)HexNAc(3) (T)">dHex(4)Hex(2)HexNAc(3) (T)</option> + <option value="dHex(4)Hex(3)HexNAc(2)NeuAc(1) (S)">dHex(4)Hex(3)HexNAc(2)NeuAc(1) (S)</option> + <option value="dHex(4)Hex(3)HexNAc(2)NeuAc(1) (T)">dHex(4)Hex(3)HexNAc(2)NeuAc(1) (T)</option> <option value="dHex(4)Hex(3)HexNAc(3) (S)">dHex(4)Hex(3)HexNAc(3) (S)</option> <option value="dHex(4)Hex(3)HexNAc(3) (T)">dHex(4)Hex(3)HexNAc(3) (T)</option> <option value="dHex(4)HexNAc(3)Kdn(1) (S)">dHex(4)HexNAc(3)Kdn(1) (S)</option> @@ -3757,6 +4130,12 @@ <option value="Diethylphosphate (S)">Diethylphosphate (S)</option> <option value="Diethylphosphate (T)">Diethylphosphate (T)</option> <option value="Diethylphosphate (Y)">Diethylphosphate (Y)</option> + <option value="Diethylphosphothione (C)">Diethylphosphothione (C)</option> + <option value="Diethylphosphothione (H)">Diethylphosphothione (H)</option> + <option value="Diethylphosphothione (K)">Diethylphosphothione (K)</option> + <option value="Diethylphosphothione (S)">Diethylphosphothione (S)</option> + <option value="Diethylphosphothione (T)">Diethylphosphothione (T)</option> + <option value="Diethylphosphothione (Y)">Diethylphosphothione (Y)</option> <option value="Difuran (Y)">Difuran (Y)</option> <option value="Dihydroxyimidazolidine (R)">Dihydroxyimidazolidine (R)</option> <option value="Diiodo (H)">Diiodo (H)</option> @@ -3806,15 +4185,26 @@ <option value="Dimethyl:2H(6)13C(2) (Protein N-term)">Dimethyl:2H(6)13C(2) (Protein N-term)</option> <option value="Dimethyl:2H(6)13C(2) (R)">Dimethyl:2H(6)13C(2) (R)</option> <option value="DimethylamineGMBS (C)">DimethylamineGMBS (C)</option> + <option value="Dimethylaminoethyl (C)">Dimethylaminoethyl (C)</option> <option value="DimethylArsino (C)">DimethylArsino (C)</option> + <option value="Dimethylphosphothione (C)">Dimethylphosphothione (C)</option> + <option value="Dimethylphosphothione (H)">Dimethylphosphothione (H)</option> + <option value="Dimethylphosphothione (K)">Dimethylphosphothione (K)</option> + <option value="Dimethylphosphothione (S)">Dimethylphosphothione (S)</option> + <option value="Dimethylphosphothione (T)">Dimethylphosphothione (T)</option> + <option value="Dimethylphosphothione (Y)">Dimethylphosphothione (Y)</option> <option value="DimethylpyrroleAdduct (K)">DimethylpyrroleAdduct (K)</option> <option value="Dioxidation (C)">Dioxidation (C)</option> + <option value="Dioxidation (E)">Dioxidation (E)</option> <option value="Dioxidation (F)">Dioxidation (F)</option> + <option value="Dioxidation (I)">Dioxidation (I)</option> <option value="Dioxidation (K)">Dioxidation (K)</option> + <option value="Dioxidation (L)">Dioxidation (L)</option> <option value="Dioxidation (M)">Dioxidation (M)</option> <option value="Dioxidation (P)">Dioxidation (P)</option> <option value="Dioxidation (R)">Dioxidation (R)</option> <option value="Dioxidation (U)">Dioxidation (U)</option> + <option value="Dioxidation (V)">Dioxidation (V)</option> <option value="Dioxidation (W)">Dioxidation (W)</option> <option value="Dioxidation (Y)">Dioxidation (Y)</option> <option value="Diphthamide (H)">Diphthamide (H)</option> @@ -3831,18 +4221,9 @@ <option value="dNIC (N-term)">dNIC (N-term)</option> <option value="DNPS (C)">DNPS (C)</option> <option value="DNPS (W)">DNPS (W)</option> - <option value="DTBP (K)">DTBP (K)</option> - <option value="DTBP (N)">DTBP (N)</option> - <option value="DTBP (Protein N-term)">DTBP (Protein N-term)</option> - <option value="DTBP (Q)">DTBP (Q)</option> - <option value="DTBP (R)">DTBP (R)</option> - <option value="DTT_C (C)">DTT_C (C)</option> - <option value="DTT_C:2H(6) (C)">DTT_C:2H(6) (C)</option> - <option value="DTT_ST (S)">DTT_ST (S)</option> - <option value="DTT_ST (T)">DTT_ST (T)</option> - <option value="DTT_ST:2H(6) (S)">DTT_ST:2H(6) (S)</option> - <option value="DTT_ST:2H(6) (T)">DTT_ST:2H(6) (T)</option> + <option value="DTT (C)">DTT (C)</option> <option value="DyLight-maleimide (C)">DyLight-maleimide (C)</option> + <option value="DYn-2 (C)">DYn-2 (C)</option> <option value="EDEDTIDVFQQQTGG (K)">EDEDTIDVFQQQTGG (K)</option> <option value="EDT-iodoacetyl-PEO-biotin (S)">EDT-iodoacetyl-PEO-biotin (S)</option> <option value="EDT-iodoacetyl-PEO-biotin (T)">EDT-iodoacetyl-PEO-biotin (T)</option> @@ -3911,6 +4292,7 @@ <option value="Formyl (Protein N-term)">Formyl (Protein N-term)</option> <option value="Formyl (S)">Formyl (S)</option> <option value="Formyl (T)">Formyl (T)</option> + <option value="Formylasparagine (H)">Formylasparagine (H)</option> <option value="FormylMet (Protein N-term)">FormylMet (Protein N-term)</option> <option value="FP-Biotin (K)">FP-Biotin (K)</option> <option value="FP-Biotin (S)">FP-Biotin (S)</option> @@ -3929,6 +4311,7 @@ <option value="GeranylGeranyl (C)">GeranylGeranyl (C)</option> <option value="GG (C)">GG (C)</option> <option value="GG (K)">GG (K)</option> + <option value="GG (Protein N-term)">GG (Protein N-term)</option> <option value="GG (S)">GG (S)</option> <option value="GG (T)">GG (T)</option> <option value="GGQ (K)">GGQ (K)</option> @@ -3995,6 +4378,7 @@ <option value="GluGluGlu (Protein C-term)">GluGluGlu (Protein C-term)</option> <option value="GluGluGluGlu (E)">GluGluGluGlu (E)</option> <option value="GluGluGluGlu (Protein C-term)">GluGluGluGlu (Protein C-term)</option> + <option value="Gluratylation (K)">Gluratylation (K)</option> <option value="Glutathione (C)">Glutathione (C)</option> <option value="Gly (K)">Gly (K)</option> <option value="Gly (S)">Gly (S)</option> @@ -4023,9 +4407,17 @@ <option value="glycidamide (K)">glycidamide (K)</option> <option value="glycidamide (N-term)">glycidamide (N-term)</option> <option value="Glycosyl (P)">Glycosyl (P)</option> + <option value="glyoxalAGE (R)">glyoxalAGE (R)</option> + <option value="GNLLFLACYCIGG (K)">GNLLFLACYCIGG (K)</option> <option value="GPIanchor (Protein C-term)">GPIanchor (Protein C-term)</option> <option value="Guanidinyl (K)">Guanidinyl (K)</option> <option value="Guanidinyl (N-term)">Guanidinyl (N-term)</option> + <option value="Haloxon (C)">Haloxon (C)</option> + <option value="Haloxon (H)">Haloxon (H)</option> + <option value="Haloxon (K)">Haloxon (K)</option> + <option value="Haloxon (S)">Haloxon (S)</option> + <option value="Haloxon (T)">Haloxon (T)</option> + <option value="Haloxon (Y)">Haloxon (Y)</option> <option value="HCysteinyl (C)">HCysteinyl (C)</option> <option value="HCysThiolactone (K)">HCysThiolactone (K)</option> <option value="Heme (C)">Heme (C)</option> @@ -4105,6 +4497,8 @@ <option value="Hex(1)HexNAc(2)dHex(2) (N)">Hex(1)HexNAc(2)dHex(2) (N)</option> <option value="Hex(1)HexNAc(2)dHex(2) (S)">Hex(1)HexNAc(2)dHex(2) (S)</option> <option value="Hex(1)HexNAc(2)dHex(2) (T)">Hex(1)HexNAc(2)dHex(2) (T)</option> + <option value="Hex(1)HexNAc(2)dHex(2)Sulf(1) (S)">Hex(1)HexNAc(2)dHex(2)Sulf(1) (S)</option> + <option value="Hex(1)HexNAc(2)dHex(2)Sulf(1) (T)">Hex(1)HexNAc(2)dHex(2)Sulf(1) (T)</option> <option value="Hex(1)HexNAc(2)NeuAc(1) (S)">Hex(1)HexNAc(2)NeuAc(1) (S)</option> <option value="Hex(1)HexNAc(2)NeuAc(1) (T)">Hex(1)HexNAc(2)NeuAc(1) (T)</option> <option value="Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S)">Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S)</option> @@ -4128,6 +4522,8 @@ <option value="Hex(1)HexNAc(3)NeuGc(1) (T)">Hex(1)HexNAc(3)NeuGc(1) (T)</option> <option value="Hex(1)HexNAc(3)Sulf(1) (S)">Hex(1)HexNAc(3)Sulf(1) (S)</option> <option value="Hex(1)HexNAc(3)Sulf(1) (T)">Hex(1)HexNAc(3)Sulf(1) (T)</option> + <option value="Hex(1)HexNAc(4)dHex(1)Sulf(1) (S)">Hex(1)HexNAc(4)dHex(1)Sulf(1) (S)</option> + <option value="Hex(1)HexNAc(4)dHex(1)Sulf(1) (T)">Hex(1)HexNAc(4)dHex(1)Sulf(1) (T)</option> <option value="Hex(1)NeuAc(1) (S)">Hex(1)NeuAc(1) (S)</option> <option value="Hex(1)NeuAc(1) (T)">Hex(1)NeuAc(1) (T)</option> <option value="Hex(1)NeuAc(1)Pent(1) (S)">Hex(1)NeuAc(1)Pent(1) (S)</option> @@ -4138,16 +4534,26 @@ <option value="Hex(1)Pent(1) (T)">Hex(1)Pent(1) (T)</option> <option value="Hex(1)Pent(2) (S)">Hex(1)Pent(2) (S)</option> <option value="Hex(1)Pent(2) (T)">Hex(1)Pent(2) (T)</option> + <option value="Hex(1)Pent(2)Me(1) (S)">Hex(1)Pent(2)Me(1) (S)</option> + <option value="Hex(1)Pent(2)Me(1) (T)">Hex(1)Pent(2)Me(1) (T)</option> + <option value="Hex(1)Pent(3) (S)">Hex(1)Pent(3) (S)</option> + <option value="Hex(1)Pent(3) (T)">Hex(1)Pent(3) (T)</option> + <option value="Hex(1)Pent(3)Me(1) (S)">Hex(1)Pent(3)Me(1) (S)</option> + <option value="Hex(1)Pent(3)Me(1) (T)">Hex(1)Pent(3)Me(1) (T)</option> + <option value="Hex(10)HexNAc(1) (N)">Hex(10)HexNAc(1) (N)</option> <option value="Hex(10)Phos(3) (S)">Hex(10)Phos(3) (S)</option> <option value="Hex(10)Phos(3) (T)">Hex(10)Phos(3) (T)</option> <option value="Hex(2) (K)">Hex(2) (K)</option> <option value="Hex(2) (R)">Hex(2) (R)</option> + <option value="Hex(2) (S)">Hex(2) (S)</option> + <option value="Hex(2) (T)">Hex(2) (T)</option> <option value="Hex(2)HexA(1)HexNAc(1)Sulf(1) (S)">Hex(2)HexA(1)HexNAc(1)Sulf(1) (S)</option> <option value="Hex(2)HexA(1)HexNAc(1)Sulf(1) (T)">Hex(2)HexA(1)HexNAc(1)Sulf(1) (T)</option> <option value="Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (S)">Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (S)</option> <option value="Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (T)">Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (T)</option> <option value="Hex(2)HexA(1)Pent(1)Sulf(1) (S)">Hex(2)HexA(1)Pent(1)Sulf(1) (S)</option> <option value="Hex(2)HexA(1)Pent(1)Sulf(1) (T)">Hex(2)HexA(1)Pent(1)Sulf(1) (T)</option> + <option value="Hex(2)HexNAc(1) (N)">Hex(2)HexNAc(1) (N)</option> <option value="Hex(2)HexNAc(1) (S)">Hex(2)HexNAc(1) (S)</option> <option value="Hex(2)HexNAc(1) (T)">Hex(2)HexNAc(1) (T)</option> <option value="Hex(2)HexNAc(1)Me(1) (S)">Hex(2)HexNAc(1)Me(1) (S)</option> @@ -4160,6 +4566,8 @@ <option value="Hex(2)HexNAc(1)NeuGc(3) (T)">Hex(2)HexNAc(1)NeuGc(3) (T)</option> <option value="Hex(2)HexNAc(1)NeuGc(4) (S)">Hex(2)HexNAc(1)NeuGc(4) (S)</option> <option value="Hex(2)HexNAc(1)NeuGc(4) (T)">Hex(2)HexNAc(1)NeuGc(4) (T)</option> + <option value="Hex(2)HexNAc(1)Pent(1)HexA(1) (S)">Hex(2)HexNAc(1)Pent(1)HexA(1) (S)</option> + <option value="Hex(2)HexNAc(1)Pent(1)HexA(1) (T)">Hex(2)HexNAc(1)Pent(1)HexA(1) (T)</option> <option value="Hex(2)HexNAc(1)Sulf(1) (S)">Hex(2)HexNAc(1)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(1)Sulf(1) (T)">Hex(2)HexNAc(1)Sulf(1) (T)</option> <option value="Hex(2)HexNAc(2) (N)">Hex(2)HexNAc(2) (N)</option> @@ -4169,6 +4577,8 @@ <option value="Hex(2)HexNAc(2)dHex(1) (S)">Hex(2)HexNAc(2)dHex(1) (S)</option> <option value="Hex(2)HexNAc(2)dHex(1) (T)">Hex(2)HexNAc(2)dHex(1) (T)</option> <option value="Hex(2)HexNAc(2)NeuAc(1) (N)">Hex(2)HexNAc(2)NeuAc(1) (N)</option> + <option value="Hex(2)HexNAc(2)NeuAc(1) (S)">Hex(2)HexNAc(2)NeuAc(1) (S)</option> + <option value="Hex(2)HexNAc(2)NeuAc(1) (T)">Hex(2)HexNAc(2)NeuAc(1) (T)</option> <option value="Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)">Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T)">Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T)</option> <option value="Hex(2)HexNAc(2)NeuAc(2) (S)">Hex(2)HexNAc(2)NeuAc(2) (S)</option> @@ -4180,6 +4590,7 @@ <option value="Hex(2)HexNAc(2)Pent(1) (N)">Hex(2)HexNAc(2)Pent(1) (N)</option> <option value="Hex(2)HexNAc(2)Sulf(1) (S)">Hex(2)HexNAc(2)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(2)Sulf(1) (T)">Hex(2)HexNAc(2)Sulf(1) (T)</option> + <option value="Hex(2)HexNAc(3) (N)">Hex(2)HexNAc(3) (N)</option> <option value="Hex(2)HexNAc(3) (S)">Hex(2)HexNAc(3) (S)</option> <option value="Hex(2)HexNAc(3) (T)">Hex(2)HexNAc(3) (T)</option> <option value="Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (S)">Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (S)</option> @@ -4198,6 +4609,7 @@ <option value="Hex(2)HexNAc(3)NeuGc(3) (T)">Hex(2)HexNAc(3)NeuGc(3) (T)</option> <option value="Hex(2)HexNAc(3)Sulf(1) (S)">Hex(2)HexNAc(3)Sulf(1) (S)</option> <option value="Hex(2)HexNAc(3)Sulf(1) (T)">Hex(2)HexNAc(3)Sulf(1) (T)</option> + <option value="Hex(2)HexNAc(4) (N)">Hex(2)HexNAc(4) (N)</option> <option value="Hex(2)HexNAc(4) (S)">Hex(2)HexNAc(4) (S)</option> <option value="Hex(2)HexNAc(4) (T)">Hex(2)HexNAc(4) (T)</option> <option value="Hex(2)HexNAc(4)NeuAc(1) (S)">Hex(2)HexNAc(4)NeuAc(1) (S)</option> @@ -4206,11 +4618,20 @@ <option value="Hex(2)HexNAc(5) (T)">Hex(2)HexNAc(5) (T)</option> <option value="Hex(2)NeuAc(1) (S)">Hex(2)NeuAc(1) (S)</option> <option value="Hex(2)NeuAc(1) (T)">Hex(2)NeuAc(1) (T)</option> + <option value="Hex(2)Pent(2) (S)">Hex(2)Pent(2) (S)</option> + <option value="Hex(2)Pent(2) (T)">Hex(2)Pent(2) (T)</option> + <option value="Hex(2)Pent(2)Me(1) (S)">Hex(2)Pent(2)Me(1) (S)</option> + <option value="Hex(2)Pent(2)Me(1) (T)">Hex(2)Pent(2)Me(1) (T)</option> + <option value="Hex(2)Sulf(1) (S)">Hex(2)Sulf(1) (S)</option> + <option value="Hex(2)Sulf(1) (T)">Hex(2)Sulf(1) (T)</option> <option value="Hex(3) (N)">Hex(3) (N)</option> <option value="Hex(3) (S)">Hex(3) (S)</option> <option value="Hex(3) (T)">Hex(3) (T)</option> + <option value="Hex(3)HexNAc(1) (N)">Hex(3)HexNAc(1) (N)</option> <option value="Hex(3)HexNAc(1) (S)">Hex(3)HexNAc(1) (S)</option> <option value="Hex(3)HexNAc(1) (T)">Hex(3)HexNAc(1) (T)</option> + <option value="Hex(3)HexNAc(1)HexA(1) (S)">Hex(3)HexNAc(1)HexA(1) (S)</option> + <option value="Hex(3)HexNAc(1)HexA(1) (T)">Hex(3)HexNAc(1)HexA(1) (T)</option> <option value="Hex(3)HexNAc(1)Me(1) (S)">Hex(3)HexNAc(1)Me(1) (S)</option> <option value="Hex(3)HexNAc(1)Me(1) (T)">Hex(3)HexNAc(1)Me(1) (T)</option> <option value="Hex(3)HexNAc(1)Pent(1) (N)">Hex(3)HexNAc(1)Pent(1) (N)</option> @@ -4233,22 +4654,27 @@ <option value="Hex(3)HexNAc(3)NeuAc(2) (T)">Hex(3)HexNAc(3)NeuAc(2) (T)</option> <option value="Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (S)">Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (S)</option> <option value="Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (T)">Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (T)</option> + <option value="Hex(3)HexNAc(3)NeuAc(3) (S)">Hex(3)HexNAc(3)NeuAc(3) (S)</option> + <option value="Hex(3)HexNAc(3)NeuAc(3) (T)">Hex(3)HexNAc(3)NeuAc(3) (T)</option> <option value="Hex(3)HexNAc(3)NeuGc(1) (S)">Hex(3)HexNAc(3)NeuGc(1) (S)</option> <option value="Hex(3)HexNAc(3)NeuGc(1) (T)">Hex(3)HexNAc(3)NeuGc(1) (T)</option> <option value="Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (S)">Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (S)</option> <option value="Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (T)">Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (T)</option> <option value="Hex(3)HexNAc(3)Pent(1) (N)">Hex(3)HexNAc(3)Pent(1) (N)</option> + <option value="Hex(3)HexNAc(3)Sulf(1) (N)">Hex(3)HexNAc(3)Sulf(1) (N)</option> <option value="Hex(3)HexNAc(3)Sulf(1) (S)">Hex(3)HexNAc(3)Sulf(1) (S)</option> <option value="Hex(3)HexNAc(3)Sulf(1) (T)">Hex(3)HexNAc(3)Sulf(1) (T)</option> <option value="Hex(3)HexNAc(4) (N)">Hex(3)HexNAc(4) (N)</option> <option value="Hex(3)HexNAc(4) (S)">Hex(3)HexNAc(4) (S)</option> <option value="Hex(3)HexNAc(4) (T)">Hex(3)HexNAc(4) (T)</option> <option value="Hex(3)HexNAc(4)NeuAc(1) (N)">Hex(3)HexNAc(4)NeuAc(1) (N)</option> + <option value="Hex(3)HexNAc(4)NeuAc(2) (N)">Hex(3)HexNAc(4)NeuAc(2) (N)</option> <option value="Hex(3)HexNAc(4)Pent(1) (N)">Hex(3)HexNAc(4)Pent(1) (N)</option> <option value="Hex(3)HexNAc(4)Sulf(1) (N)">Hex(3)HexNAc(4)Sulf(1) (N)</option> <option value="Hex(3)HexNAc(5) (N)">Hex(3)HexNAc(5) (N)</option> <option value="Hex(3)HexNAc(5) (S)">Hex(3)HexNAc(5) (S)</option> <option value="Hex(3)HexNAc(5) (T)">Hex(3)HexNAc(5) (T)</option> + <option value="Hex(3)HexNAc(5)NeuAc(1) (N)">Hex(3)HexNAc(5)NeuAc(1) (N)</option> <option value="Hex(3)HexNAc(5)Sulf(1) (N)">Hex(3)HexNAc(5)Sulf(1) (N)</option> <option value="Hex(3)HexNAc(6) (N)">Hex(3)HexNAc(6) (N)</option> <option value="Hex(3)HexNAc(6) (S)">Hex(3)HexNAc(6) (S)</option> @@ -4258,14 +4684,19 @@ <option value="Hex(3)HexNAc(6)Sulf(2) (N)">Hex(3)HexNAc(6)Sulf(2) (N)</option> <option value="Hex(3)HexNAc(7) (N)">Hex(3)HexNAc(7) (N)</option> <option value="Hex(3)HexNAc(7)Sulf(1) (N)">Hex(3)HexNAc(7)Sulf(1) (N)</option> - <option value="Hex(3)Phos(1) (S)">Hex(3)Phos(1) (S)</option> - <option value="Hex(3)Phos(1) (T)">Hex(3)Phos(1) (T)</option> <option value="Hex(4) (S)">Hex(4) (S)</option> <option value="Hex(4) (T)">Hex(4) (T)</option> + <option value="Hex(4)HexA(1) (S)">Hex(4)HexA(1) (S)</option> + <option value="Hex(4)HexA(1) (T)">Hex(4)HexA(1) (T)</option> + <option value="Hex(4)HexA(1)HexNAc(1) (S)">Hex(4)HexA(1)HexNAc(1) (S)</option> + <option value="Hex(4)HexA(1)HexNAc(1) (T)">Hex(4)HexA(1)HexNAc(1) (T)</option> + <option value="Hex(4)HexNAc(1) (N)">Hex(4)HexNAc(1) (N)</option> <option value="Hex(4)HexNAc(1) (S)">Hex(4)HexNAc(1) (S)</option> <option value="Hex(4)HexNAc(1) (T)">Hex(4)HexNAc(1) (T)</option> <option value="Hex(4)HexNAc(2) (N)">Hex(4)HexNAc(2) (N)</option> <option value="Hex(4)HexNAc(2)NeuAc(1) (N)">Hex(4)HexNAc(2)NeuAc(1) (N)</option> + <option value="Hex(4)HexNAc(2)NeuAc(1) (S)">Hex(4)HexNAc(2)NeuAc(1) (S)</option> + <option value="Hex(4)HexNAc(2)NeuAc(1) (T)">Hex(4)HexNAc(2)NeuAc(1) (T)</option> <option value="Hex(4)HexNAc(2)Pent(1) (N)">Hex(4)HexNAc(2)Pent(1) (N)</option> <option value="Hex(4)HexNAc(3) (N)">Hex(4)HexNAc(3) (N)</option> <option value="Hex(4)HexNAc(3) (S)">Hex(4)HexNAc(3) (S)</option> @@ -4287,6 +4718,9 @@ <option value="Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (T)">Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (T)</option> <option value="Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (S)">Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (S)</option> <option value="Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (T)">Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (T)</option> + <option value="Hex(4)HexNAc(4)NeuGc(1) (N)">Hex(4)HexNAc(4)NeuGc(1) (N)</option> + <option value="Hex(4)HexNAc(4)NeuGc(1) (S)">Hex(4)HexNAc(4)NeuGc(1) (S)</option> + <option value="Hex(4)HexNAc(4)NeuGc(1) (T)">Hex(4)HexNAc(4)NeuGc(1) (T)</option> <option value="Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (S)">Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (S)</option> <option value="Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (T)">Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (T)</option> <option value="Hex(4)HexNAc(4)Pent(1) (N)">Hex(4)HexNAc(4)Pent(1) (N)</option> @@ -4301,6 +4735,9 @@ <option value="Hex(4)Phos(1) (T)">Hex(4)Phos(1) (T)</option> <option value="Hex(5) (S)">Hex(5) (S)</option> <option value="Hex(5) (T)">Hex(5) (T)</option> + <option value="Hex(5)HexA(1) (S)">Hex(5)HexA(1) (S)</option> + <option value="Hex(5)HexA(1) (T)">Hex(5)HexA(1) (T)</option> + <option value="Hex(5)HexNAc(1) (N)">Hex(5)HexNAc(1) (N)</option> <option value="Hex(5)HexNAc(1) (S)">Hex(5)HexNAc(1) (S)</option> <option value="Hex(5)HexNAc(1) (T)">Hex(5)HexNAc(1) (T)</option> <option value="Hex(5)HexNAc(2) (N)">Hex(5)HexNAc(2) (N)</option> @@ -4312,6 +4749,8 @@ <option value="Hex(5)HexNAc(4) (T)">Hex(5)HexNAc(4) (T)</option> <option value="Hex(5)HexNAc(4)Me(2)Pent(1) (N)">Hex(5)HexNAc(4)Me(2)Pent(1) (N)</option> <option value="Hex(5)HexNAc(4)NeuAc(1) (N)">Hex(5)HexNAc(4)NeuAc(1) (N)</option> + <option value="Hex(5)HexNAc(4)NeuAc(1)Ac(1) (N)">Hex(5)HexNAc(4)NeuAc(1)Ac(1) (N)</option> + <option value="Hex(5)HexNAc(4)NeuAc(1)Ac(2) (N)">Hex(5)HexNAc(4)NeuAc(1)Ac(2) (N)</option> <option value="Hex(5)HexNAc(4)NeuAc(1)Sulf(1) (N)">Hex(5)HexNAc(4)NeuAc(1)Sulf(1) (N)</option> <option value="Hex(5)HexNAc(4)NeuAc(2) (N)">Hex(5)HexNAc(4)NeuAc(2) (N)</option> <option value="Hex(5)HexNAc(4)NeuGc(1) (N)">Hex(5)HexNAc(4)NeuGc(1) (N)</option> @@ -4323,6 +4762,7 @@ <option value="Hex(5)Phos(1) (T)">Hex(5)Phos(1) (T)</option> <option value="Hex(5)Phos(3) (S)">Hex(5)Phos(3) (S)</option> <option value="Hex(5)Phos(3) (T)">Hex(5)Phos(3) (T)</option> + <option value="Hex(6)HexNAc(1) (N)">Hex(6)HexNAc(1) (N)</option> <option value="Hex(6)HexNAc(2) (N)">Hex(6)HexNAc(2) (N)</option> <option value="Hex(6)HexNAc(2)Phos(1) (N)">Hex(6)HexNAc(2)Phos(1) (N)</option> <option value="Hex(6)HexNAc(3) (N)">Hex(6)HexNAc(3) (N)</option> @@ -4350,14 +4790,19 @@ <option value="Hex(8)HexNAc(2) (N)">Hex(8)HexNAc(2) (N)</option> <option value="Hex(8)Phos(3) (S)">Hex(8)Phos(3) (S)</option> <option value="Hex(8)Phos(3) (T)">Hex(8)Phos(3) (T)</option> + <option value="Hex(9) (N)">Hex(9) (N)</option> + <option value="Hex(9)HexNAc(1) (N)">Hex(9)HexNAc(1) (N)</option> <option value="Hex(9)HexNAc(2) (N)">Hex(9)HexNAc(2) (N)</option> <option value="Hex(9)Phos(3) (S)">Hex(9)Phos(3) (S)</option> <option value="Hex(9)Phos(3) (T)">Hex(9)Phos(3) (T)</option> + <option value="HexA(2)HexNAc(3) (S)">HexA(2)HexNAc(3) (S)</option> + <option value="HexA(2)HexNAc(3) (T)">HexA(2)HexNAc(3) (T)</option> <option value="HexN (K)">HexN (K)</option> <option value="HexN (N)">HexN (N)</option> <option value="HexN (S)">HexN (S)</option> <option value="HexN (T)">HexN (T)</option> <option value="HexN (W)">HexN (W)</option> + <option value="HexNAc (C)">HexNAc (C)</option> <option value="HexNAc (N)">HexNAc (N)</option> <option value="HexNAc (S)">HexNAc (S)</option> <option value="HexNAc (T)">HexNAc (T)</option> @@ -4384,6 +4829,8 @@ <option value="HexNAc(2)NeuAc(1)Sulf(1) (T)">HexNAc(2)NeuAc(1)Sulf(1) (T)</option> <option value="HexNAc(2)NeuGc(1) (S)">HexNAc(2)NeuGc(1) (S)</option> <option value="HexNAc(2)NeuGc(1) (T)">HexNAc(2)NeuGc(1) (T)</option> + <option value="HexNAc(2)Sulf(1) (S)">HexNAc(2)Sulf(1) (S)</option> + <option value="HexNAc(2)Sulf(1) (T)">HexNAc(2)Sulf(1) (T)</option> <option value="HexNAc(3) (S)">HexNAc(3) (S)</option> <option value="HexNAc(3) (T)">HexNAc(3) (T)</option> <option value="HexNAc(3)Sulf(1) (S)">HexNAc(3)Sulf(1) (S)</option> @@ -4438,6 +4885,7 @@ <option value="Hydroxycinnamyl (C)">Hydroxycinnamyl (C)</option> <option value="Hydroxyfarnesyl (C)">Hydroxyfarnesyl (C)</option> <option value="Hydroxyheme (E)">Hydroxyheme (E)</option> + <option value="hydroxyisobutyryl (K)">hydroxyisobutyryl (K)</option> <option value="Hydroxymethyl (N)">Hydroxymethyl (N)</option> <option value="HydroxymethylOP (K)">HydroxymethylOP (K)</option> <option value="Hydroxytrimethyl (K)">Hydroxytrimethyl (K)</option> @@ -4500,6 +4948,7 @@ <option value="Isopropylphospho (S)">Isopropylphospho (S)</option> <option value="Isopropylphospho (T)">Isopropylphospho (T)</option> <option value="Isopropylphospho (Y)">Isopropylphospho (Y)</option> + <option value="iTRAQ4plex (C)">iTRAQ4plex (C)</option> <option value="iTRAQ4plex (H)">iTRAQ4plex (H)</option> <option value="iTRAQ4plex (K)">iTRAQ4plex (K)</option> <option value="iTRAQ4plex (N-term)">iTRAQ4plex (N-term)</option> @@ -4507,12 +4956,15 @@ <option value="iTRAQ4plex (S)">iTRAQ4plex (S)</option> <option value="iTRAQ4plex (T)">iTRAQ4plex (T)</option> <option value="iTRAQ4plex (Y)">iTRAQ4plex (Y)</option> + <option value="iTRAQ4plex114 (C)">iTRAQ4plex114 (C)</option> <option value="iTRAQ4plex114 (K)">iTRAQ4plex114 (K)</option> <option value="iTRAQ4plex114 (N-term)">iTRAQ4plex114 (N-term)</option> <option value="iTRAQ4plex114 (Y)">iTRAQ4plex114 (Y)</option> + <option value="iTRAQ4plex115 (C)">iTRAQ4plex115 (C)</option> <option value="iTRAQ4plex115 (K)">iTRAQ4plex115 (K)</option> <option value="iTRAQ4plex115 (N-term)">iTRAQ4plex115 (N-term)</option> <option value="iTRAQ4plex115 (Y)">iTRAQ4plex115 (Y)</option> + <option value="iTRAQ8plex (C)">iTRAQ8plex (C)</option> <option value="iTRAQ8plex (H)">iTRAQ8plex (H)</option> <option value="iTRAQ8plex (K)">iTRAQ8plex (K)</option> <option value="iTRAQ8plex (N-term)">iTRAQ8plex (N-term)</option> @@ -4520,6 +4972,7 @@ <option value="iTRAQ8plex (S)">iTRAQ8plex (S)</option> <option value="iTRAQ8plex (T)">iTRAQ8plex (T)</option> <option value="iTRAQ8plex (Y)">iTRAQ8plex (Y)</option> + <option value="iTRAQ8plex:13C(6)15N(2) (C)">iTRAQ8plex:13C(6)15N(2) (C)</option> <option value="iTRAQ8plex:13C(6)15N(2) (K)">iTRAQ8plex:13C(6)15N(2) (K)</option> <option value="iTRAQ8plex:13C(6)15N(2) (N-term)">iTRAQ8plex:13C(6)15N(2) (N-term)</option> <option value="iTRAQ8plex:13C(6)15N(2) (Y)">iTRAQ8plex:13C(6)15N(2) (Y)</option> @@ -4589,8 +5042,10 @@ <option value="Label:2H(3) (L)">Label:2H(3) (L)</option> <option value="Label:2H(3) (M)">Label:2H(3) (M)</option> <option value="Label:2H(3)+Oxidation (M)">Label:2H(3)+Oxidation (M)</option> + <option value="Label:2H(4) (A)">Label:2H(4) (A)</option> <option value="Label:2H(4) (F)">Label:2H(4) (F)</option> <option value="Label:2H(4) (K)">Label:2H(4) (K)</option> + <option value="Label:2H(4) (U)">Label:2H(4) (U)</option> <option value="Label:2H(4) (Y)">Label:2H(4) (Y)</option> <option value="Label:2H(4)+Acetyl (K)">Label:2H(4)+Acetyl (K)</option> <option value="Label:2H(4)+GG (K)">Label:2H(4)+GG (K)</option> @@ -4649,19 +5104,25 @@ <option value="maleimide5 (C)">maleimide5 (C)</option> <option value="maleimide5 (K)">maleimide5 (K)</option> <option value="Malonyl (C)">Malonyl (C)</option> + <option value="Malonyl (K)">Malonyl (K)</option> <option value="Malonyl (S)">Malonyl (S)</option> <option value="MDCC (C)">MDCC (C)</option> + <option value="MeMePhosphorothioate (S)">MeMePhosphorothioate (S)</option> <option value="Menadione (C)">Menadione (C)</option> <option value="Menadione (K)">Menadione (K)</option> <option value="Menadione-HQ (C)">Menadione-HQ (C)</option> <option value="Menadione-HQ (K)">Menadione-HQ (K)</option> <option value="MercaptoEthanol (S)">MercaptoEthanol (S)</option> <option value="MercaptoEthanol (T)">MercaptoEthanol (T)</option> + <option value="MesitylOxide (H)">MesitylOxide (H)</option> + <option value="MesitylOxide (K)">MesitylOxide (K)</option> + <option value="MesitylOxide (Protein N-term)">MesitylOxide (Protein N-term)</option> <option value="Met->Aha (M)">Met->Aha (M)</option> <option value="Met->Ala (M)">Met->Ala (M)</option> <option value="Met->Arg (M)">Met->Arg (M)</option> <option value="Met->Asn (M)">Met->Asn (M)</option> <option value="Met->Asp (M)">Met->Asp (M)</option> + <option value="Met->AspSA (M)">Met->AspSA (M)</option> <option value="Met->Cys (M)">Met->Cys (M)</option> <option value="Met->Gln (M)">Met->Gln (M)</option> <option value="Met->Glu (M)">Met->Glu (M)</option> @@ -4681,6 +5142,18 @@ <option value="Met->Xle (M)">Met->Xle (M)</option> <option value="Met-loss (Protein N-term M)">Met-loss (Protein N-term M)</option> <option value="Met-loss+Acetyl (Protein N-term M)">Met-loss+Acetyl (Protein N-term M)</option> + <option value="Methamidophos-O (C)">Methamidophos-O (C)</option> + <option value="Methamidophos-O (H)">Methamidophos-O (H)</option> + <option value="Methamidophos-O (K)">Methamidophos-O (K)</option> + <option value="Methamidophos-O (S)">Methamidophos-O (S)</option> + <option value="Methamidophos-O (T)">Methamidophos-O (T)</option> + <option value="Methamidophos-O (Y)">Methamidophos-O (Y)</option> + <option value="Methamidophos-S (C)">Methamidophos-S (C)</option> + <option value="Methamidophos-S (H)">Methamidophos-S (H)</option> + <option value="Methamidophos-S (K)">Methamidophos-S (K)</option> + <option value="Methamidophos-S (S)">Methamidophos-S (S)</option> + <option value="Methamidophos-S (T)">Methamidophos-S (T)</option> + <option value="Methamidophos-S (Y)">Methamidophos-S (Y)</option> <option value="Methyl (C)">Methyl (C)</option> <option value="Methyl (C-term)">Methyl (C-term)</option> <option value="Methyl (D)">Methyl (D)</option> @@ -4729,6 +5202,9 @@ <option value="Methylamine (S)">Methylamine (S)</option> <option value="Methylamine (T)">Methylamine (T)</option> <option value="Methylmalonylation (S)">Methylmalonylation (S)</option> + <option value="methylol (K)">methylol (K)</option> + <option value="methylol (W)">methylol (W)</option> + <option value="methylol (Y)">methylol (Y)</option> <option value="Methylphosphonate (S)">Methylphosphonate (S)</option> <option value="Methylphosphonate (T)">Methylphosphonate (T)</option> <option value="Methylphosphonate (Y)">Methylphosphonate (Y)</option> @@ -4750,6 +5226,12 @@ <option value="MolybdopterinGD (D)">MolybdopterinGD (D)</option> <option value="MolybdopterinGD (U)">MolybdopterinGD (U)</option> <option value="MolybdopterinGD+Delta:S(-1)Se(1) (C)">MolybdopterinGD+Delta:S(-1)Se(1) (C)</option> + <option value="monomethylphosphothione (C)">monomethylphosphothione (C)</option> + <option value="monomethylphosphothione (H)">monomethylphosphothione (H)</option> + <option value="monomethylphosphothione (K)">monomethylphosphothione (K)</option> + <option value="monomethylphosphothione (S)">monomethylphosphothione (S)</option> + <option value="monomethylphosphothione (T)">monomethylphosphothione (T)</option> + <option value="monomethylphosphothione (Y)">monomethylphosphothione (Y)</option> <option value="mTRAQ (H)">mTRAQ (H)</option> <option value="mTRAQ (K)">mTRAQ (K)</option> <option value="mTRAQ (N-term)">mTRAQ (N-term)</option> @@ -4807,9 +5289,12 @@ <option value="NIC (K)">NIC (K)</option> <option value="NIC (N-term)">NIC (N-term)</option> <option value="NIPCAM (C)">NIPCAM (C)</option> + <option value="Nitrene (Y)">Nitrene (Y)</option> + <option value="Nitro (F)">Nitro (F)</option> <option value="Nitro (W)">Nitro (W)</option> <option value="Nitro (Y)">Nitro (Y)</option> <option value="Nitrosyl (C)">Nitrosyl (C)</option> + <option value="Nitrosyl (Y)">Nitrosyl (Y)</option> <option value="Nmethylmaleimide (C)">Nmethylmaleimide (C)</option> <option value="Nmethylmaleimide (K)">Nmethylmaleimide (K)</option> <option value="Nmethylmaleimide+water (C)">Nmethylmaleimide+water (C)</option> @@ -4841,14 +5326,21 @@ <option value="Oxidation (C)">Oxidation (C)</option> <option value="Oxidation (C-term G)">Oxidation (C-term G)</option> <option value="Oxidation (D)">Oxidation (D)</option> + <option value="Oxidation (E)">Oxidation (E)</option> <option value="Oxidation (F)">Oxidation (F)</option> <option value="Oxidation (H)">Oxidation (H)</option> + <option value="Oxidation (I)">Oxidation (I)</option> <option value="Oxidation (K)">Oxidation (K)</option> + <option value="Oxidation (L)">Oxidation (L)</option> <option value="Oxidation (M)" selected="true">Oxidation (M)</option> <option value="Oxidation (N)">Oxidation (N)</option> <option value="Oxidation (P)">Oxidation (P)</option> + <option value="Oxidation (Q)">Oxidation (Q)</option> <option value="Oxidation (R)">Oxidation (R)</option> + <option value="Oxidation (S)">Oxidation (S)</option> + <option value="Oxidation (T)">Oxidation (T)</option> <option value="Oxidation (U)">Oxidation (U)</option> + <option value="Oxidation (V)">Oxidation (V)</option> <option value="Oxidation (W)">Oxidation (W)</option> <option value="Oxidation (Y)">Oxidation (Y)</option> <option value="Oxidation+NEM (C)">Oxidation+NEM (C)</option> @@ -4867,6 +5359,10 @@ <option value="PEITC (C)">PEITC (C)</option> <option value="PEITC (K)">PEITC (K)</option> <option value="PEITC (N-term)">PEITC (N-term)</option> + <option value="Pent(1)HexNAc(1) (S)">Pent(1)HexNAc(1) (S)</option> + <option value="Pent(1)HexNAc(1) (T)">Pent(1)HexNAc(1) (T)</option> + <option value="Pent(2) (S)">Pent(2) (S)</option> + <option value="Pent(2) (T)">Pent(2) (T)</option> <option value="Pentose (S)">Pentose (S)</option> <option value="Pentose (T)">Pentose (T)</option> <option value="Pentylamine (Q)">Pentylamine (Q)</option> @@ -4897,6 +5393,7 @@ <option value="phenylsulfonylethyl (C)">phenylsulfonylethyl (C)</option> <option value="Phospho (C)">Phospho (C)</option> <option value="Phospho (D)">Phospho (D)</option> + <option value="Phospho (E)">Phospho (E)</option> <option value="Phospho (H)">Phospho (H)</option> <option value="Phospho (K)">Phospho (K)</option> <option value="Phospho (R)">Phospho (R)</option> @@ -4907,6 +5404,9 @@ <option value="Phosphoadenosine (K)">Phosphoadenosine (K)</option> <option value="Phosphoadenosine (T)">Phosphoadenosine (T)</option> <option value="Phosphoadenosine (Y)">Phosphoadenosine (Y)</option> + <option value="PhosphoCytidine (S)">PhosphoCytidine (S)</option> + <option value="PhosphoCytidine (T)">PhosphoCytidine (T)</option> + <option value="PhosphoCytidine (Y)">PhosphoCytidine (Y)</option> <option value="Phosphogluconoylation (K)">Phosphogluconoylation (K)</option> <option value="Phosphogluconoylation (N-term)">Phosphogluconoylation (N-term)</option> <option value="Phosphoguanosine (H)">Phosphoguanosine (H)</option> @@ -4941,6 +5441,7 @@ <option value="Pro->Gln (P)">Pro->Gln (P)</option> <option value="Pro->Glu (P)">Pro->Glu (P)</option> <option value="Pro->Gly (P)">Pro->Gly (P)</option> + <option value="Pro->HAVA (P)">Pro->HAVA (P)</option> <option value="Pro->His (P)">Pro->His (P)</option> <option value="Pro->Lys (P)">Pro->Lys (P)</option> <option value="Pro->Met (P)">Pro->Met (P)</option> @@ -5044,9 +5545,12 @@ <option value="Ser->Tyr (S)">Ser->Tyr (S)</option> <option value="Ser->Val (S)">Ser->Val (S)</option> <option value="Ser->Xle (S)">Ser->Xle (S)</option> + <option value="serotonylation (Q)">serotonylation (Q)</option> + <option value="shTMT (K)">shTMT (K)</option> + <option value="shTMT (N-term)">shTMT (N-term)</option> + <option value="shTMT (Protein N-term)">shTMT (Protein N-term)</option> <option value="SMA (K)">SMA (K)</option> <option value="SMA (N-term)">SMA (N-term)</option> - <option value="SMCC-maleimide (C)">SMCC-maleimide (C)</option> <option value="spermidine (Q)">spermidine (Q)</option> <option value="spermine (Q)">spermine (Q)</option> <option value="SPITC (K)">SPITC (K)</option> @@ -5083,9 +5587,14 @@ <option value="TAMRA-FP (S)">TAMRA-FP (S)</option> <option value="TAMRA-FP (Y)">TAMRA-FP (Y)</option> <option value="Thiadiazole (C)">Thiadiazole (C)</option> - <option value="Thiazolidine (N-term C)">Thiazolidine (N-term C)</option> - <option value="Thioacyl (K)">Thioacyl (K)</option> - <option value="Thioacyl (X)">Thioacyl (X)</option> + <option value="Thiazolidine (C)">Thiazolidine (C)</option> + <option value="Thiazolidine (F)">Thiazolidine (F)</option> + <option value="Thiazolidine (H)">Thiazolidine (H)</option> + <option value="Thiazolidine (K)">Thiazolidine (K)</option> + <option value="Thiazolidine (Protein N-term)">Thiazolidine (Protein N-term)</option> + <option value="Thiazolidine (R)">Thiazolidine (R)</option> + <option value="Thiazolidine (W)">Thiazolidine (W)</option> + <option value="Thiazolidine (Y)">Thiazolidine (Y)</option> <option value="thioacylPA (K)">thioacylPA (K)</option> <option value="Thiophos-S-S-biotin (S)">Thiophos-S-S-biotin (S)</option> <option value="Thiophos-S-S-biotin (T)">Thiophos-S-S-biotin (T)</option> @@ -5117,7 +5626,12 @@ <option value="TMAB (N-term)">TMAB (N-term)</option> <option value="TMAB:2H(9) (K)">TMAB:2H(9) (K)</option> <option value="TMAB:2H(9) (N-term)">TMAB:2H(9) (N-term)</option> + <option value="TMPP-Ac (K)">TMPP-Ac (K)</option> <option value="TMPP-Ac (N-term)">TMPP-Ac (N-term)</option> + <option value="TMPP-Ac (Y)">TMPP-Ac (Y)</option> + <option value="TMPP-Ac:13C(9) (K)">TMPP-Ac:13C(9) (K)</option> + <option value="TMPP-Ac:13C(9) (N-term)">TMPP-Ac:13C(9) (N-term)</option> + <option value="TMPP-Ac:13C(9) (Y)">TMPP-Ac:13C(9) (Y)</option> <option value="TMT (H)">TMT (H)</option> <option value="TMT (K)">TMT (K)</option> <option value="TMT (N-term)">TMT (N-term)</option> @@ -5136,6 +5650,18 @@ <option value="TMT6plex (Protein N-term)">TMT6plex (Protein N-term)</option> <option value="TMT6plex (S)">TMT6plex (S)</option> <option value="TMT6plex (T)">TMT6plex (T)</option> + <option value="TMTpro (H)">TMTpro (H)</option> + <option value="TMTpro (K)">TMTpro (K)</option> + <option value="TMTpro (N-term)">TMTpro (N-term)</option> + <option value="TMTpro (Protein N-term)">TMTpro (Protein N-term)</option> + <option value="TMTpro (S)">TMTpro (S)</option> + <option value="TMTpro (T)">TMTpro (T)</option> + <option value="TMTpro_zero (H)">TMTpro_zero (H)</option> + <option value="TMTpro_zero (K)">TMTpro_zero (K)</option> + <option value="TMTpro_zero (N-term)">TMTpro_zero (N-term)</option> + <option value="TMTpro_zero (Protein N-term)">TMTpro_zero (Protein N-term)</option> + <option value="TMTpro_zero (S)">TMTpro_zero (S)</option> + <option value="TMTpro_zero (T)">TMTpro_zero (T)</option> <option value="TNBS (K)">TNBS (K)</option> <option value="TNBS (N-term)">TNBS (N-term)</option> <option value="trifluoro (L)">trifluoro (L)</option> @@ -5149,6 +5675,7 @@ <option value="Trimethyl:2H(9) (K)">Trimethyl:2H(9) (K)</option> <option value="Trimethyl:2H(9) (R)">Trimethyl:2H(9) (R)</option> <option value="Trioxidation (C)">Trioxidation (C)</option> + <option value="Trioxidation (F)">Trioxidation (F)</option> <option value="Trioxidation (W)">Trioxidation (W)</option> <option value="Trioxidation (Y)">Trioxidation (Y)</option> <option value="Tripalmitate (Protein N-term C)">Tripalmitate (Protein N-term C)</option> @@ -5207,6 +5734,44 @@ <option value="UgiJoullieProGly (E)">UgiJoullieProGly (E)</option> <option value="UgiJoullieProGlyProGly (D)">UgiJoullieProGlyProGly (D)</option> <option value="UgiJoullieProGlyProGly (E)">UgiJoullieProGlyProGly (E)</option> + <option value="Unknown:162 (C-term)">Unknown:162 (C-term)</option> + <option value="Unknown:162 (D)">Unknown:162 (D)</option> + <option value="Unknown:162 (E)">Unknown:162 (E)</option> + <option value="Unknown:162 (N-term)">Unknown:162 (N-term)</option> + <option value="Unknown:177 (C-term)">Unknown:177 (C-term)</option> + <option value="Unknown:177 (D)">Unknown:177 (D)</option> + <option value="Unknown:177 (E)">Unknown:177 (E)</option> + <option value="Unknown:177 (N-term)">Unknown:177 (N-term)</option> + <option value="Unknown:210 (C-term)">Unknown:210 (C-term)</option> + <option value="Unknown:210 (D)">Unknown:210 (D)</option> + <option value="Unknown:210 (E)">Unknown:210 (E)</option> + <option value="Unknown:210 (N-term)">Unknown:210 (N-term)</option> + <option value="Unknown:216 (C-term)">Unknown:216 (C-term)</option> + <option value="Unknown:216 (D)">Unknown:216 (D)</option> + <option value="Unknown:216 (E)">Unknown:216 (E)</option> + <option value="Unknown:216 (N-term)">Unknown:216 (N-term)</option> + <option value="Unknown:234 (C-term)">Unknown:234 (C-term)</option> + <option value="Unknown:234 (D)">Unknown:234 (D)</option> + <option value="Unknown:234 (E)">Unknown:234 (E)</option> + <option value="Unknown:234 (N-term)">Unknown:234 (N-term)</option> + <option value="Unknown:248 (C-term)">Unknown:248 (C-term)</option> + <option value="Unknown:248 (D)">Unknown:248 (D)</option> + <option value="Unknown:248 (E)">Unknown:248 (E)</option> + <option value="Unknown:248 (N-term)">Unknown:248 (N-term)</option> + <option value="Unknown:250 (C-term)">Unknown:250 (C-term)</option> + <option value="Unknown:250 (D)">Unknown:250 (D)</option> + <option value="Unknown:250 (E)">Unknown:250 (E)</option> + <option value="Unknown:250 (N-term)">Unknown:250 (N-term)</option> + <option value="Unknown:302 (C-term)">Unknown:302 (C-term)</option> + <option value="Unknown:302 (D)">Unknown:302 (D)</option> + <option value="Unknown:302 (E)">Unknown:302 (E)</option> + <option value="Unknown:302 (N-term)">Unknown:302 (N-term)</option> + <option value="Unknown:306 (C-term)">Unknown:306 (C-term)</option> + <option value="Unknown:306 (D)">Unknown:306 (D)</option> + <option value="Unknown:306 (E)">Unknown:306 (E)</option> + <option value="Unknown:306 (N-term)">Unknown:306 (N-term)</option> + <option value="Unknown:420 (C-term)">Unknown:420 (C-term)</option> + <option value="Unknown:420 (N-term)">Unknown:420 (N-term)</option> <option value="Val->Ala (V)">Val->Ala (V)</option> <option value="Val->Arg (V)">Val->Arg (V)</option> <option value="Val->Asn (V)">Val->Asn (V)</option> @@ -5265,47 +5830,112 @@ <option value="Xle->Val (I)">Xle->Val (I)</option> <option value="Xle->Val (L)">Xle->Val (L)</option> <option value="Xlink:B10621 (C)">Xlink:B10621 (C)</option> - <option value="Xlink:DMP (K)">Xlink:DMP (K)</option> - <option value="Xlink:DMP (Protein N-term)">Xlink:DMP (Protein N-term)</option> - <option value="Xlink:DMP-de (K)">Xlink:DMP-de (K)</option> - <option value="Xlink:DMP-de (Protein N-term)">Xlink:DMP-de (Protein N-term)</option> - <option value="Xlink:DMP-s (K)">Xlink:DMP-s (K)</option> - <option value="Xlink:DMP-s (Protein N-term)">Xlink:DMP-s (Protein N-term)</option> - <option value="Xlink:DSS (K)">Xlink:DSS (K)</option> - <option value="Xlink:DSS (Protein N-term)">Xlink:DSS (Protein N-term)</option> - <option value="Xlink:DSS-NH2 (K)">Xlink:DSS-NH2 (K)</option> - <option value="Xlink:DSS-NH2 (Protein N-term)">Xlink:DSS-NH2 (Protein N-term)</option> - <option value="Xlink:DST (K)">Xlink:DST (K)</option> - <option value="Xlink:DST (Protein N-term)">Xlink:DST (Protein N-term)</option> - <option value="Xlink:DTSSP (K)">Xlink:DTSSP (K)</option> - <option value="Xlink:DTSSP (Protein N-term)">Xlink:DTSSP (Protein N-term)</option> - <option value="Xlink:EGS (K)">Xlink:EGS (K)</option> - <option value="Xlink:EGS (Protein N-term)">Xlink:EGS (Protein N-term)</option> - <option value="Xlink:EGScleaved (K)">Xlink:EGScleaved (K)</option> - <option value="Xlink:EGScleaved (Protein N-term)">Xlink:EGScleaved (Protein N-term)</option> - <option value="Xlink:SMCC (C)">Xlink:SMCC (C)</option> - <option value="Xlink:SSD (K)">Xlink:SSD (K)</option> + <option value="Xlink:BMOE (C)">Xlink:BMOE (C)</option> + <option value="Xlink:BS2G[113] (K)">Xlink:BS2G[113] (K)</option> + <option value="Xlink:BS2G[113] (Protein N-term)">Xlink:BS2G[113] (Protein N-term)</option> + <option value="Xlink:BS2G[114] (K)">Xlink:BS2G[114] (K)</option> + <option value="Xlink:BS2G[114] (Protein N-term)">Xlink:BS2G[114] (Protein N-term)</option> + <option value="Xlink:BS2G[217] (K)">Xlink:BS2G[217] (K)</option> + <option value="Xlink:BS2G[217] (Protein N-term)">Xlink:BS2G[217] (Protein N-term)</option> + <option value="Xlink:BS2G[96] (K)">Xlink:BS2G[96] (K)</option> + <option value="Xlink:BS2G[96] (Protein N-term)">Xlink:BS2G[96] (Protein N-term)</option> + <option value="Xlink:BuUrBu[111] (K)">Xlink:BuUrBu[111] (K)</option> + <option value="Xlink:BuUrBu[111] (Protein N-term)">Xlink:BuUrBu[111] (Protein N-term)</option> + <option value="Xlink:BuUrBu[196] (K)">Xlink:BuUrBu[196] (K)</option> + <option value="Xlink:BuUrBu[196] (Protein N-term)">Xlink:BuUrBu[196] (Protein N-term)</option> + <option value="Xlink:BuUrBu[213] (K)">Xlink:BuUrBu[213] (K)</option> + <option value="Xlink:BuUrBu[213] (Protein N-term)">Xlink:BuUrBu[213] (Protein N-term)</option> + <option value="Xlink:BuUrBu[214] (K)">Xlink:BuUrBu[214] (K)</option> + <option value="Xlink:BuUrBu[214] (Protein N-term)">Xlink:BuUrBu[214] (Protein N-term)</option> + <option value="Xlink:BuUrBu[317] (K)">Xlink:BuUrBu[317] (K)</option> + <option value="Xlink:BuUrBu[317] (Protein N-term)">Xlink:BuUrBu[317] (Protein N-term)</option> + <option value="Xlink:BuUrBu[85] (K)">Xlink:BuUrBu[85] (K)</option> + <option value="Xlink:BuUrBu[85] (Protein N-term)">Xlink:BuUrBu[85] (Protein N-term)</option> + <option value="Xlink:DFDNB (K)">Xlink:DFDNB (K)</option> + <option value="Xlink:DFDNB (N)">Xlink:DFDNB (N)</option> + <option value="Xlink:DFDNB (Q)">Xlink:DFDNB (Q)</option> + <option value="Xlink:DFDNB (R)">Xlink:DFDNB (R)</option> + <option value="Xlink:DMP[122] (K)">Xlink:DMP[122] (K)</option> + <option value="Xlink:DMP[122] (Protein N-term)">Xlink:DMP[122] (Protein N-term)</option> + <option value="Xlink:DMP[139] (K)">Xlink:DMP[139] (K)</option> + <option value="Xlink:DMP[139] (Protein N-term)">Xlink:DMP[139] (Protein N-term)</option> + <option value="Xlink:DMP[140] (K)">Xlink:DMP[140] (K)</option> + <option value="Xlink:DMP[140] (Protein N-term)">Xlink:DMP[140] (Protein N-term)</option> + <option value="Xlink:DMP[154] (K)">Xlink:DMP[154] (K)</option> + <option value="Xlink:DMP[154] (Protein N-term)">Xlink:DMP[154] (Protein N-term)</option> + <option value="Xlink:DSS[138] (K)">Xlink:DSS[138] (K)</option> + <option value="Xlink:DSS[138] (Protein N-term)">Xlink:DSS[138] (Protein N-term)</option> + <option value="Xlink:DSS[155] (K)">Xlink:DSS[155] (K)</option> + <option value="Xlink:DSS[155] (Protein N-term)">Xlink:DSS[155] (Protein N-term)</option> + <option value="Xlink:DSS[156] (K)">Xlink:DSS[156] (K)</option> + <option value="Xlink:DSS[156] (Protein N-term)">Xlink:DSS[156] (Protein N-term)</option> + <option value="Xlink:DSS[259] (K)">Xlink:DSS[259] (K)</option> + <option value="Xlink:DSS[259] (Protein N-term)">Xlink:DSS[259] (Protein N-term)</option> + <option value="Xlink:DSSO[104] (K)">Xlink:DSSO[104] (K)</option> + <option value="Xlink:DSSO[104] (Protein N-term)">Xlink:DSSO[104] (Protein N-term)</option> + <option value="Xlink:DSSO[158] (K)">Xlink:DSSO[158] (K)</option> + <option value="Xlink:DSSO[158] (Protein N-term)">Xlink:DSSO[158] (Protein N-term)</option> + <option value="Xlink:DSSO[175] (K)">Xlink:DSSO[175] (K)</option> + <option value="Xlink:DSSO[175] (Protein N-term)">Xlink:DSSO[175] (Protein N-term)</option> + <option value="Xlink:DSSO[176] (K)">Xlink:DSSO[176] (K)</option> + <option value="Xlink:DSSO[176] (Protein N-term)">Xlink:DSSO[176] (Protein N-term)</option> + <option value="Xlink:DSSO[279] (K)">Xlink:DSSO[279] (K)</option> + <option value="Xlink:DSSO[279] (Protein N-term)">Xlink:DSSO[279] (Protein N-term)</option> + <option value="Xlink:DSSO[54] (K)">Xlink:DSSO[54] (K)</option> + <option value="Xlink:DSSO[54] (Protein N-term)">Xlink:DSSO[54] (Protein N-term)</option> + <option value="Xlink:DSSO[86] (K)">Xlink:DSSO[86] (K)</option> + <option value="Xlink:DSSO[86] (Protein N-term)">Xlink:DSSO[86] (Protein N-term)</option> + <option value="Xlink:DST[114] (K)">Xlink:DST[114] (K)</option> + <option value="Xlink:DST[114] (Protein N-term)">Xlink:DST[114] (Protein N-term)</option> + <option value="Xlink:DST[132] (K)">Xlink:DST[132] (K)</option> + <option value="Xlink:DST[132] (Protein N-term)">Xlink:DST[132] (Protein N-term)</option> + <option value="Xlink:DST[56] (K)">Xlink:DST[56] (K)</option> + <option value="Xlink:DST[56] (Protein N-term)">Xlink:DST[56] (Protein N-term)</option> + <option value="Xlink:DTBP[172] (K)">Xlink:DTBP[172] (K)</option> + <option value="Xlink:DTBP[172] (Protein N-term)">Xlink:DTBP[172] (Protein N-term)</option> + <option value="Xlink:DTBP[87] (K)">Xlink:DTBP[87] (K)</option> + <option value="Xlink:DTBP[87] (Protein N-term)">Xlink:DTBP[87] (Protein N-term)</option> + <option value="Xlink:DTSSP[174] (K)">Xlink:DTSSP[174] (K)</option> + <option value="Xlink:DTSSP[174] (Protein N-term)">Xlink:DTSSP[174] (Protein N-term)</option> + <option value="Xlink:DTSSP[192] (K)">Xlink:DTSSP[192] (K)</option> + <option value="Xlink:DTSSP[192] (Protein N-term)">Xlink:DTSSP[192] (Protein N-term)</option> + <option value="Xlink:DTSSP[88] (K)">Xlink:DTSSP[88] (K)</option> + <option value="Xlink:DTSSP[88] (Protein N-term)">Xlink:DTSSP[88] (Protein N-term)</option> + <option value="Xlink:EGS[115] (K)">Xlink:EGS[115] (K)</option> + <option value="Xlink:EGS[115] (Protein N-term)">Xlink:EGS[115] (Protein N-term)</option> + <option value="Xlink:EGS[226] (K)">Xlink:EGS[226] (K)</option> + <option value="Xlink:EGS[226] (Protein N-term)">Xlink:EGS[226] (Protein N-term)</option> + <option value="Xlink:EGS[244] (K)">Xlink:EGS[244] (K)</option> + <option value="Xlink:EGS[244] (Protein N-term)">Xlink:EGS[244] (Protein N-term)</option> + <option value="Xlink:SMCC[219] (C)">Xlink:SMCC[219] (C)</option> + <option value="Xlink:SMCC[219] (K)">Xlink:SMCC[219] (K)</option> + <option value="Xlink:SMCC[219] (Protein N-term)">Xlink:SMCC[219] (Protein N-term)</option> + <option value="Xlink:SMCC[237] (C)">Xlink:SMCC[237] (C)</option> + <option value="Xlink:SMCC[237] (K)">Xlink:SMCC[237] (K)</option> + <option value="Xlink:SMCC[237] (Protein N-term)">Xlink:SMCC[237] (Protein N-term)</option> + <option value="Xlink:SMCC[321] (C)">Xlink:SMCC[321] (C)</option> <option value="ZGB (K)">ZGB (K)</option> <option value="ZGB (N-term)">ZGB (N-term)</option> + <option value="ZQG (K)">ZQG (K)</option> <expand macro="list_string_san"/> </param> <param name="v" argument="-v" type="integer" optional="true" value="1" label="number of missed cleavages allowed" help=""/> <param name="enzyme" argument="-enzyme" type="select" optional="false" label="The enzyme used for peptide digestion" help=""> <option value="Trypsin" selected="true">Trypsin</option> + <option value="Lys-C/P">Lys-C/P</option> + <option value="PepsinA">PepsinA</option> + <option value="TrypChymo">TrypChymo</option> <option value="Trypsin/P">Trypsin/P</option> - <option value="Asp-N_ambic">Asp-N_ambic</option> + <option value="CNBr">CNBr</option> + <option value="Formic_acid">Formic_acid</option> + <option value="glutamyl endopeptidase">glutamyl endopeptidase</option> <option value="Chymotrypsin">Chymotrypsin</option> - <option value="CNBr">CNBr</option> - <option value="Lys-C/P">Lys-C/P</option> + <option value="Asp-N_ambic">Asp-N_ambic</option> + <option value="Lys-C">Lys-C</option> + <option value="Arg-C">Arg-C</option> <option value="no cleavage">no cleavage</option> <option value="unspecific cleavage">unspecific cleavage</option> - <option value="PepsinA">PepsinA</option> - <option value="TrypChymo">TrypChymo</option> - <option value="glutamyl endopeptidase">glutamyl endopeptidase</option> <option value="Asp-N">Asp-N</option> - <option value="Formic_acid">Formic_acid</option> - <option value="Lys-C">Lys-C</option> - <option value="Arg-C">Arg-C</option> <expand macro="list_string_san"/> </param> <param name="hl" argument="-hl" type="integer" optional="true" value="30" label="maximum number of hits retained for one spectrum" help="Note: even when set to 1 OMSSA may report multiple hits with different charge states"/> @@ -5341,12 +5971,12 @@ <param name="ir" argument="-ir" type="float" optional="true" value="0.0" label="evalue threshold to replace a hit, 0 = only if bette" help=""/> <param name="ii" argument="-ii" type="float" optional="true" value="0.0" label="evalue threshold to iteratively search a spectrum again, 0 = always" help=""/> <param name="chunk_size" argument="-chunk_size" type="integer" optional="true" value="0" label="Number of spectra to submit in one chunk to OMSSA" help="Chunks with more than 30k spectra will likely cause memory allocation issues with 32bit OMSSA versions (which is usually the case on Windows). To disable chunking (i.e. submit all spectra in one big chunk), set it to '0'"/> - <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> + <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/> <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> <expand macro="list_string_san"/> </param> </expand> - <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> + <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs"> <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> </param> </inputs> @@ -5363,6 +5993,6 @@ <help><![CDATA[Annotates MS/MS spectra using OMSSA. -For more information, visit http://www.openms.de/documentation/TOPP_OMSSAAdapter.html]]></help> +For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_OMSSAAdapter.html]]></help> <expand macro="references"/> </tool>