Mercurial > repos > galaxyp > openms_openswathchromatogramextractor

comparison OpenSwathChromatogramExtractor.xml @ 1:47729465a3d3 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9a14ed1f2d3c9abdfb080251b3419dd9e0c52a14
author galaxyp
date Wed, 09 Aug 2017 09:35:25 -0400
parents f41f97505717
children ebe0e9442a29
comparison
equal deleted inserted replaced
0:f41f97505717 1:47729465a3d3
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version='1.0' encoding='UTF-8'?>
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
3 <!--Proposed Tool Section: [Targeted Experiments]--> 3 <!--Proposed Tool Section: [Targeted Experiments]-->
4 <tool id="OpenSwathChromatogramExtractor" name="OpenSwathChromatogramExtractor" version="2.1.0"> 4 <tool id="OpenSwathChromatogramExtractor" name="OpenSwathChromatogramExtractor" version="2.2.0">
5 <description>Extract chromatograms (XIC) from a MS2 map file.</description> 5 <description>Extract chromatograms (XIC) from a MS2 map file.</description>
6 <macros> 6 <macros>
7 <token name="@EXECUTABLE@">OpenSwathChromatogramExtractor</token> 7 <token name="@EXECUTABLE@">OpenSwathChromatogramExtractor</token>
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
42 #end if 42 #end if
43 #if $param_extract_MS1: 43 #if $param_extract_MS1:
44 -extract_MS1 44 -extract_MS1
45 #end if 45 #end if
46 #if $param_extraction_function: 46 #if $param_extraction_function:
47 -extraction_function $param_extraction_function 47 -extraction_function
48 #if " " in str($param_extraction_function):
49 "$param_extraction_function"
50 #else
51 $param_extraction_function
52 #end if
48 #end if 53 #end if
49 #if $param_model_type: 54 #if $param_model_type:
50 -model:type $param_model_type 55 -model:type
56 #if " " in str($param_model_type):
57 "$param_model_type"
58 #else
59 $param_model_type
60 #end if
51 #end if 61 #end if
52 #if $param_model_symmetric_regression: 62 #if $param_model_symmetric_regression:
53 -model:symmetric_regression 63 -model:symmetric_regression
54 #end if 64 #end if
55 #if $adv_opts.adv_opts_selector=='advanced': 65 #if $adv_opts.adv_opts_selector=='advanced':