Mercurial > repos > galaxyp > openms_openswathchromatogramextractor

diff OpenSwathChromatogramExtractor.xml @ 7:24cfe1d7137e draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:04:03 -0400
parents ebe0e9442a29
children e9c148b32f87
line wrap: on
line diff
--- a/OpenSwathChromatogramExtractor.xml	Tue Mar 20 14:39:10 2018 -0400
+++ b/OpenSwathChromatogramExtractor.xml	Wed May 15 08:04:03 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>OpenSwathChromatogramExtractor
+  <command detect_errors="aggressive"><![CDATA[OpenSwathChromatogramExtractor
 
 -in
   #for token in $param_in:
@@ -67,7 +67,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzml" multiple="true" optional="False" size="30" label="Input files separated by blank" help="(-in) ">
       <sanitizer>
@@ -106,5 +106,5 @@
   <help>Extract chromatograms (XIC) from a MS2 map file.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_OpenSwathChromatogramExtractor.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_OpenSwathChromatogramExtractor.html</help>
 </tool>