Mercurial > repos > galaxyp > openms_proteinresolver

diff ProteinResolver.xml @ 7:6cf5aa34e245 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:08:48 -0400
parents dc9abec0379f
children 814d6f4706e3
line wrap: on
line diff
--- a/ProteinResolver.xml	Tue Mar 20 14:42:02 2018 -0400
+++ b/ProteinResolver.xml	Wed May 15 08:08:48 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>ProteinResolver
+  <command detect_errors="aggressive"><![CDATA[ProteinResolver
 
 #if $param_fasta:
   -fasta $param_fasta
@@ -70,7 +70,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_fasta" type="data" format="fasta" optional="False" label="Input database file" help="(-fasta) "/>
     <param name="param_in" type="data" format="idxml,consensusxml" multiple="true" optional="True" size="30" label="Input file(s) holding experimental data" help="(-in) ">
@@ -130,5 +130,5 @@
   <help>protein inference
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_ProteinResolver.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_ProteinResolver.html</help>
 </tool>