Mercurial > repos > galaxyp > openms_psmfeatureextractor
diff macros_test.xml @ 8:59736982ab7b draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms"
author | galaxyp |
---|---|
date | Mon, 14 Dec 2020 16:54:21 +0000 |
parents | 151e4b119c70 |
children |
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--- a/macros_test.xml Fri Nov 06 19:43:10 2020 +0000 +++ b/macros_test.xml Mon Dec 14 16:54:21 2020 +0000 @@ -335,6 +335,7 @@ <output name="out" ftype="idxml" value="PhosphoScoring.idxml" compare="sim_size" delta="5700"/> </test> </xml> +<!-- TODO PSMFeatureExtractor should have auto tests with 2.7 https://github.com/OpenMS/OpenMS/pull/5087 --> <xml name="manutest_PSMFeatureExtractor"> <test expect_num_outputs="1"><!-- using the idXML outputs of two SearchAdapters that should be compatible --> <param name="adv_opts_cond|test" value="true"/> @@ -354,6 +355,13 @@ <param name="out_type" value="mzid"/> <output name="out" ftype="mzid" value="PSMFeatureExtractor.mzid" compare="sim_size" delta="500"/> </test> + <test expect_num_outputs="1"><!-- using the idXML outputs of two SearchAdapters that should be compatible --> + <param name="adv_opts_cond|test" value="true"/> + <param name="in" ftype="idxml" value="MSGFPlusAdapter_1_out.idXML"/> + <param name="adv_opts_cond|adv_opts_selector" value="advanced"/> + <param name="out_type" value="idxml"/> + <output name="out" ftype="idxml" value="PSMFeatureExtractor_3.idXML" compare="sim_size" delta="500"/> + </test> </xml> <xml name="manutest_QCCalculator"> <test expect_num_outputs="1"><!-- took test data from another test w mzML input -->